RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 CSRNP1Q96S65 589 aa18.55■□□□□ 0.56
TTC38-202ENST00000417709 ZC3H12CQ9C0D7 883 aaKnown RBP18.55■□□□□ 0.56
TTC38-202ENST00000417709 ASTN2O75129 1339 aaPredicted RBP18.54■□□□□ 0.56
TTC38-202ENST00000417709 SULF1Q8IWU6 871 aa18.54■□□□□ 0.56
TTC38-202ENST00000417709 TBC1D16Q8TBP0 767 aa18.54■□□□□ 0.56
TTC38-202ENST00000417709 EYA3Q99504 573 aa18.54■□□□□ 0.56
TTC38-202ENST00000417709 CHL1O00533 1208 aa18.53■□□□□ 0.56
TTC38-202ENST00000417709 IRS4O14654 1257 aaPredicted RBP18.53■□□□□ 0.56
TTC38-202ENST00000417709 LMOD3Q0VAK6 560 aa18.53■□□□□ 0.56
TTC38-202ENST00000417709 ISCA1Q9BUE6 129 aa18.53■□□□□ 0.56
TTC38-202ENST00000417709 DUOX1Q9NRD9 1551 aa18.53■□□□□ 0.56
TTC38-202ENST00000417709 SAGE1Q9NXZ1 904 aa18.53■□□□□ 0.56
TTC38-202ENST00000417709 RTL9Q8NET4 1388 aa18.53■□□□□ 0.56
TTC38-202ENST00000417709 VIL1P09327 827 aaKnown RBP18.52■□□□□ 0.56
TTC38-202ENST00000417709 KIF4BQ2VIQ3 1234 aa18.52■□□□□ 0.56
TTC38-202ENST00000417709 HDGFL1Q5TGJ6 251 aa18.52■□□□□ 0.56
TTC38-202ENST00000417709 CCDC146Q8IYE0 955 aa18.52■□□□□ 0.56
TTC38-202ENST00000417709 SCARF1Q14162 830 aa18.51■□□□□ 0.55
TTC38-202ENST00000417709 CDCA5Q96FF9 252 aa18.51■□□□□ 0.55
TTC38-202ENST00000417709 SEC31BQ9NQW1 1179 aa18.51■□□□□ 0.55
TTC38-202ENST00000417709 GGA3Q9NZ52 723 aa18.51■□□□□ 0.55
TTC38-202ENST00000417709 ANKIB1Q9P2G1 1089 aa18.51■□□□□ 0.55
TTC38-202ENST00000417709 DDX60Q8IY21 1712 aaKnown RBP18.5■□□□□ 0.55
TTC38-202ENST00000417709 PCDH10Q9P2E7 1040 aa18.5■□□□□ 0.55
TTC38-202ENST00000417709 DBF4Q9UBU7 674 aaPredicted RBP18.5■□□□□ 0.55
TTC38-202ENST00000417709 UFL1O94874 794 aa18.49■□□□□ 0.55
TTC38-202ENST00000417709 SLC10A3P09131 477 aa18.49■□□□□ 0.55
TTC38-202ENST00000417709 ANGEL2Q5VTE6 544 aaKnown RBP18.49■□□□□ 0.55
TTC38-202ENST00000417709 JARID2Q92833 1246 aaPredicted RBP18.49■□□□□ 0.55
TTC38-202ENST00000417709 SCN9AQ15858 1988 aa18.49■□□□□ 0.55
TTC38-202ENST00000417709 HYPKQ9NX55 129 aa18.48■□□□□ 0.55
TTC38-202ENST00000417709 SCAF8Q9UPN6 1271 aaKnown RBP18.48■□□□□ 0.55
TTC38-202ENST00000417709 TRIM35Q9UPQ4 493 aa18.48■□□□□ 0.55
TTC38-202ENST00000417709 LRRC37AA6NMS7 1700 aa18.48■□□□□ 0.55
TTC38-202ENST00000417709 COL4A1P02462 1669 aa18.47■□□□□ 0.55
TTC38-202ENST00000417709 TRIM28Q13263 835 aaKnown RBP18.47■□□□□ 0.55
TTC38-202ENST00000417709 RIC3Q7Z5B4 369 aa18.47■□□□□ 0.55
TTC38-202ENST00000417709 CTU1Q7Z7A3 348 aaKnown RBP18.47■□□□□ 0.55
TTC38-202ENST00000417709 CCDC85AQ96PX6 553 aaPredicted RBP18.47■□□□□ 0.55
TTC38-202ENST00000417709 GGA1Q9UJY5 639 aa18.47■□□□□ 0.55
TTC38-202ENST00000417709 UBE2Q2LH0YL09 131 aa18.46■□□□□ 0.55
TTC38-202ENST00000417709 PRAMEF18Q5VWM3 479 aa18.46■□□□□ 0.55
TTC38-202ENST00000417709 DUSP27Q5VZP5 1158 aa18.46■□□□□ 0.55
TTC38-202ENST00000417709 RSBN1LQ6PCB5 846 aaPredicted RBP18.46■□□□□ 0.55
TTC38-202ENST00000417709 MOB2Q70IA6 237 aa18.46■□□□□ 0.55
TTC38-202ENST00000417709 PODXL2Q9NZ53 605 aa18.46■□□□□ 0.55
TTC38-202ENST00000417709 TBC1D8O95759 1140 aa18.45■□□□□ 0.54
TTC38-202ENST00000417709 ZNF280AP59817 542 aaPredicted RBP18.45■□□□□ 0.54
TTC38-202ENST00000417709 RASAL3Q86YV0 1011 aa18.45■□□□□ 0.54
TTC38-202ENST00000417709 REM2Q8IYK8 340 aaPredicted RBP18.45■□□□□ 0.54
TTC38-202ENST00000417709 AGBL3Q8NEM8 1001 aa18.45■□□□□ 0.54
TTC38-202ENST00000417709 USP17L8P0C7I0 530 aa18.44■□□□□ 0.54
TTC38-202ENST00000417709 ZBTB38Q8NAP3 1195 aaPredicted RBP18.44■□□□□ 0.54
TTC38-202ENST00000417709 MYOZ2Q9NPC6 264 aa18.44■□□□□ 0.54
TTC38-202ENST00000417709 HDAC9Q9UKV0 1011 aa18.44■□□□□ 0.54
TTC38-202ENST00000417709 WTIPA6NIX2 430 aaPredicted RBP18.43■□□□□ 0.54
TTC38-202ENST00000417709 ELL2O00472 640 aaPredicted RBP18.43■□□□□ 0.54
TTC38-202ENST00000417709 TTLL12Q14166 644 aaPredicted RBP18.43■□□□□ 0.54
TTC38-202ENST00000417709 RALBP1Q15311 655 aa18.43■□□□□ 0.54
TTC38-202ENST00000417709 RUNDC1Q96C34 613 aa18.43■□□□□ 0.54
TTC38-202ENST00000417709 MYD88Q99836 296 aa18.43■□□□□ 0.54
TTC38-202ENST00000417709 PHAXQ9H814 394 aaKnown RBP18.43■□□□□ 0.54
TTC38-202ENST00000417709 HPS5Q9UPZ3 1129 aa18.43■□□□□ 0.54
TTC38-202ENST00000417709 HOXB7P09629 217 aa18.42■□□□□ 0.54
TTC38-202ENST00000417709 HSP90B1P14625 803 aaKnown RBP18.42■□□□□ 0.54
TTC38-202ENST00000417709 GOLGA2Q08379 1002 aa18.42■□□□□ 0.54
TTC38-202ENST00000417709 CCDC152Q4G0S7 254 aa18.42■□□□□ 0.54
TTC38-202ENST00000417709 GMLQ99445 158 aa18.42■□□□□ 0.54
TTC38-202ENST00000417709 USP17L3A6NCW0 530 aa18.41■□□□□ 0.54
TTC38-202ENST00000417709 USP17L4A6NCW7 530 aa18.41■□□□□ 0.54
TTC38-202ENST00000417709 FKBP1BP68106 108 aa18.41■□□□□ 0.54
TTC38-202ENST00000417709 NBPF9Q3BBW0 867 aa18.41■□□□□ 0.54
TTC38-202ENST00000417709 USP17L1Q7RTZ2 530 aa18.41■□□□□ 0.54
TTC38-202ENST00000417709 PDE8AO60658 829 aa18.4■□□□□ 0.54
TTC38-202ENST00000417709 MKRN3Q13064 507 aaKnown RBP18.4■□□□□ 0.54
TTC38-202ENST00000417709 ANKRD18AQ8IVF6 992 aa18.4■□□□□ 0.54
TTC38-202ENST00000417709 ZNF296Q8WUU4 475 aaPredicted RBP18.4■□□□□ 0.54
TTC38-202ENST00000417709 MXD3Q9BW11 206 aa18.4■□□□□ 0.54
TTC38-202ENST00000417709 MBIPQ9NS73 344 aa18.4■□□□□ 0.54
TTC38-202ENST00000417709 WDR43Q15061 677 aaKnown RBP eCLIP18.39■□□□□ 0.53
TTC38-202ENST00000417709 PODNQ7Z5L7 613 aa18.39■□□□□ 0.53
TTC38-202ENST00000417709 CCDC191Q8NCU4 936 aa18.39■□□□□ 0.53
TTC38-202ENST00000417709 FBXW7Q969H0 707 aa18.39■□□□□ 0.53
TTC38-202ENST00000417709 ADAMTS8Q9UP79 889 aa18.39■□□□□ 0.53
TTC38-202ENST00000417709 XDHP47989 1333 aa18.39■□□□□ 0.53
TTC38-202ENST00000417709 PCCAP05165 728 aaPredicted RBP18.38■□□□□ 0.53
TTC38-202ENST00000417709 ATP2B4P23634 1241 aa18.38■□□□□ 0.53
TTC38-202ENST00000417709 PKN2Q16513 984 aaKnown RBP18.38■□□□□ 0.53
TTC38-202ENST00000417709 CWC25Q9NXE8 425 aaPredicted RBP18.38■□□□□ 0.53
TTC38-202ENST00000417709 PRKG1Q13976 671 aa18.37■□□□□ 0.53
TTC38-202ENST00000417709 PRPF38BQ5VTL8 546 aaKnown RBP18.37■□□□□ 0.53
TTC38-202ENST00000417709 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.37■□□□□ 0.53
TTC38-202ENST00000417709 PITPNM2Q9BZ72 1349 aa18.37■□□□□ 0.53
TTC38-202ENST00000417709 TM4SF4P48230 202 aa18.36■□□□□ 0.53
TTC38-202ENST00000417709 OGFOD1Q8N543 542 aa18.36■□□□□ 0.53
TTC38-202ENST00000417709 GPR25O00155 361 aa18.35■□□□□ 0.53
TTC38-202ENST00000417709 MINPP1Q9UNW1 487 aa18.35■□□□□ 0.53
TTC38-202ENST00000417709 NF2P35240 595 aa18.34■□□□□ 0.53
TTC38-202ENST00000417709 PTPN12Q05209 780 aaKnown RBP18.34■□□□□ 0.53
TTC38-202ENST00000417709 DDX10Q13206 875 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms