RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 PTPRNQ16849 979 aa7.78□□□□□ -1.16
ECHDC1-206ENST00000417628 NLGN1Q8N2Q7 840 aa7.78□□□□□ -1.16
ECHDC1-206ENST00000417628 KCNH5Q8NCM2 988 aa7.78□□□□□ -1.16
ECHDC1-206ENST00000417628 PBXIP1Q96AQ6 731 aa7.78□□□□□ -1.16
ECHDC1-206ENST00000417628 MAP10Q9P2G4 905 aa7.78□□□□□ -1.16
ECHDC1-206ENST00000417628 PARP3Q9Y6F1 533 aa7.78□□□□□ -1.16
ECHDC1-206ENST00000417628 ADGRB1O14514 1584 aa7.78□□□□□ -1.16
ECHDC1-206ENST00000417628 FBXO45P0C2W1 286 aa7.77□□□□□ -1.17
ECHDC1-206ENST00000417628 TMF1P82094 1093 aa7.77□□□□□ -1.17
ECHDC1-206ENST00000417628 NR1H3Q13133 447 aa7.77□□□□□ -1.17
ECHDC1-206ENST00000417628 EAPPQ56P03 285 aaPredicted RBP7.77□□□□□ -1.17
ECHDC1-206ENST00000417628 TAF1DQ9H5J8 278 aaPredicted RBP7.77□□□□□ -1.17
ECHDC1-206ENST00000417628 FKBPLQ9UIM3 349 aa7.77□□□□□ -1.17
ECHDC1-206ENST00000417628 NFAT5O94916 1531 aa7.77□□□□□ -1.17
ECHDC1-206ENST00000417628 DXOO77932 396 aaKnown RBP7.76□□□□□ -1.17
ECHDC1-206ENST00000417628 DDNO94850 711 aaPredicted RBP7.76□□□□□ -1.17
ECHDC1-206ENST00000417628 CHRNA5P30532 468 aa7.76□□□□□ -1.17
ECHDC1-206ENST00000417628 ERFEQ4G0M1 354 aa7.76□□□□□ -1.17
ECHDC1-206ENST00000417628 MSS51Q4VC12 460 aa7.76□□□□□ -1.17
ECHDC1-206ENST00000417628 THSD4Q6ZMP0 1018 aa7.76□□□□□ -1.17
ECHDC1-206ENST00000417628 PNMA1Q8ND90 353 aa7.76□□□□□ -1.17
ECHDC1-206ENST00000417628 TFIP11Q9UBB9 837 aaKnown RBP7.76□□□□□ -1.17
ECHDC1-206ENST00000417628 ADAMTSL1Q8N6G6 1762 aa7.76□□□□□ -1.17
ECHDC1-206ENST00000417628 SEMA3FQ13275 785 aa7.75□□□□□ -1.17
ECHDC1-206ENST00000417628 CTU1Q7Z7A3 348 aaKnown RBP7.75□□□□□ -1.17
ECHDC1-206ENST00000417628 CNTROBQ8N137 903 aa7.75□□□□□ -1.17
ECHDC1-206ENST00000417628 CDK19Q9BWU1 502 aa7.75□□□□□ -1.17
ECHDC1-206ENST00000417628 COL25A1Q9BXS0 654 aaPredicted RBP7.75□□□□□ -1.17
ECHDC1-206ENST00000417628 DDX21Q9NR30 783 aaKnown RBP eCLIP7.75□□□□□ -1.17
ECHDC1-206ENST00000417628 ZBBXA8MT70 800 aa7.74□□□□□ -1.17
ECHDC1-206ENST00000417628 NFKBIEO00221 500 aa7.74□□□□□ -1.17
ECHDC1-206ENST00000417628 LMOD1P29536 600 aaPredicted RBP7.74□□□□□ -1.17
ECHDC1-206ENST00000417628 MMP16P51512 607 aa7.74□□□□□ -1.17
ECHDC1-206ENST00000417628 COPS2P61201 443 aa7.74□□□□□ -1.17
ECHDC1-206ENST00000417628 EIF4G2P78344 907 aaKnown RBP eCLIP7.74□□□□□ -1.17
ECHDC1-206ENST00000417628 NBPF1Q3BBV0 1214 aa7.74□□□□□ -1.17
ECHDC1-206ENST00000417628 MAP1SQ66K74 1059 aaPredicted RBP7.74□□□□□ -1.17
ECHDC1-206ENST00000417628 TBC1D9Q6ZT07 1266 aa7.74□□□□□ -1.17
ECHDC1-206ENST00000417628 SPSB2Q99619 263 aa7.74□□□□□ -1.17
ECHDC1-206ENST00000417628 PRDM9Q9NQV7 894 aa7.74□□□□□ -1.17
ECHDC1-206ENST00000417628 PRDM6Q9NQX0 595 aa7.74□□□□□ -1.17
ECHDC1-206ENST00000417628 EVA1BQ9NVM1 165 aa7.74□□□□□ -1.17
ECHDC1-206ENST00000417628 TLL2Q9Y6L7 1015 aa7.74□□□□□ -1.17
ECHDC1-206ENST00000417628 SCN4AP35499 1836 aa7.73□□□□□ -1.17
ECHDC1-206ENST00000417628 CTHP32929 405 aa7.73□□□□□ -1.17
ECHDC1-206ENST00000417628 CIAPIN1Q6FI81 312 aa7.73□□□□□ -1.17
ECHDC1-206ENST00000417628 LINC00116Q8NCU8 138 aa7.73□□□□□ -1.17
ECHDC1-206ENST00000417628 SMARCC1Q92922 1105 aaPredicted RBP7.73□□□□□ -1.17
ECHDC1-206ENST00000417628 MAFBQ9Y5Q3 323 aaPredicted RBP7.73□□□□□ -1.17
ECHDC1-206ENST00000417628 CUL9Q8IWT3 2517 aa7.73□□□□□ -1.17
ECHDC1-206ENST00000417628 CCNYL3P0C7X3 344 aa7.72□□□□□ -1.17
ECHDC1-206ENST00000417628 KCNH2Q12809 1159 aa7.72□□□□□ -1.17
ECHDC1-206ENST00000417628 PNMA8AQ86V59 439 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-206ENST00000417628 ANKRD24Q8TF21 1146 aa7.72□□□□□ -1.17
ECHDC1-206ENST00000417628 NUDT12Q9BQG2 462 aa7.72□□□□□ -1.17
ECHDC1-206ENST00000417628 SAGE1Q9NXZ1 904 aa7.72□□□□□ -1.17
ECHDC1-206ENST00000417628 PIK3CDO00329 1044 aa7.71□□□□□ -1.18
ECHDC1-206ENST00000417628 TLL1O43897 1013 aa7.71□□□□□ -1.18
ECHDC1-206ENST00000417628 GYS1P13807 737 aa7.71□□□□□ -1.18
ECHDC1-206ENST00000417628 PLA2G5P39877 138 aa7.71□□□□□ -1.18
ECHDC1-206ENST00000417628 KCTD17Q8N5Z5 321 aa7.71□□□□□ -1.18
ECHDC1-206ENST00000417628 KCTD12Q96CX2 325 aaKnown RBP7.71□□□□□ -1.18
ECHDC1-206ENST00000417628 OCSTAMPQ9BR26 566 aa7.71□□□□□ -1.18
ECHDC1-206ENST00000417628 HACL1Q9UJ83 578 aa7.71□□□□□ -1.18
ECHDC1-206ENST00000417628 ATP9BO43861 1147 aa7.7□□□□□ -1.18
ECHDC1-206ENST00000417628 EPHX2P34913 555 aa7.7□□□□□ -1.18
ECHDC1-206ENST00000417628 PKN2Q16513 984 aaKnown RBP7.7□□□□□ -1.18
ECHDC1-206ENST00000417628 CDCA8Q53HL2 280 aa7.7□□□□□ -1.18
ECHDC1-206ENST00000417628 ERICH6BQ5W0A0 696 aa7.7□□□□□ -1.18
ECHDC1-206ENST00000417628 AEBP1Q8IUX7 1158 aa7.7□□□□□ -1.18
ECHDC1-206ENST00000417628 ZCRB1Q8TBF4 217 aaKnown RBP7.7□□□□□ -1.18
ECHDC1-206ENST00000417628 ZPR1O75312 459 aa7.69□□□□□ -1.18
ECHDC1-206ENST00000417628 ADH1BP00325 375 aa7.69□□□□□ -1.18
ECHDC1-206ENST00000417628 AKAP4Q5JQC9 854 aa7.69□□□□□ -1.18
ECHDC1-206ENST00000417628 TRAPPC3LQ5T215 181 aa7.69□□□□□ -1.18
ECHDC1-206ENST00000417628 PPARGC1BQ86YN6 1023 aaKnown RBP7.69□□□□□ -1.18
ECHDC1-206ENST00000417628 TTLL6Q8N841 843 aa7.69□□□□□ -1.18
ECHDC1-206ENST00000417628 HHIPL1Q96JK4 782 aa7.69□□□□□ -1.18
ECHDC1-206ENST00000417628 MTRQ99707 1265 aa7.69□□□□□ -1.18
ECHDC1-206ENST00000417628 RTCBQ9Y3I0 505 aaKnown RBP7.69□□□□□ -1.18
ECHDC1-206ENST00000417628 FAM208AQ9UK61 1670 aaKnown RBP7.69□□□□□ -1.18
ECHDC1-206ENST00000417628 CCDC88AQ3V6T2 1871 aa7.68□□□□□ -1.18
ECHDC1-206ENST00000417628 LOC102724428A0A0B4J2F2 783 aa7.68□□□□□ -1.18
ECHDC1-206ENST00000417628 CARNS1A5YM72 827 aa7.68□□□□□ -1.18
ECHDC1-206ENST00000417628 ATG7O95352 703 aa7.68□□□□□ -1.18
ECHDC1-206ENST00000417628 SIK1P57059 783 aa7.68□□□□□ -1.18
ECHDC1-206ENST00000417628 NOGQ13253 232 aa7.68□□□□□ -1.18
ECHDC1-206ENST00000417628 CST9Q5W186 159 aa7.68□□□□□ -1.18
ECHDC1-206ENST00000417628 PTCRAQ6ISU1 281 aaPredicted RBP7.68□□□□□ -1.18
ECHDC1-206ENST00000417628 PDXDC2PQ6P474 469 aa7.68□□□□□ -1.18
ECHDC1-206ENST00000417628 MPRIPQ6WCQ1 1025 aa7.68□□□□□ -1.18
ECHDC1-206ENST00000417628 GPSM3Q9Y4H4 160 aa7.68□□□□□ -1.18
ECHDC1-206ENST00000417628 LTBP3Q9NS15 1303 aa7.68□□□□□ -1.18
ECHDC1-206ENST00000417628 DLEC1Q9Y238 1755 aa7.68□□□□□ -1.18
ECHDC1-206ENST00000417628 INSRP06213 1382 aa7.68□□□□□ -1.18
ECHDC1-206ENST00000417628 SMG6Q86US8 1419 aaKnown RBP7.68□□□□□ -1.18
ECHDC1-206ENST00000417628 DICER1Q9UPY3 1922 aaKnown RBP7.68□□□□□ -1.18
ECHDC1-206ENST00000417628 RFC4P35249 363 aa7.67□□□□□ -1.18
ECHDC1-206ENST00000417628 PTK2Q05397 1052 aa7.67□□□□□ -1.18
ECHDC1-206ENST00000417628 FMR1Q06787 632 aaKnown RBP eCLIP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms