RNA–Protein interactions for RNA: ENST00000417437.6

VNN3-205, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-205ENST00000417437 LARGE2Q8N3Y3 721 aa8.35□□□□□ -1.07
VNN3-205ENST00000417437 MCOLN1Q9GZU1 580 aa8.35□□□□□ -1.07
VNN3-205ENST00000417437 GZF1Q9H116 711 aaPredicted RBP8.35□□□□□ -1.07
VNN3-205ENST00000417437 MBIPQ9NS73 344 aa8.35□□□□□ -1.07
VNN3-205ENST00000417437 NIP7Q9Y221 180 aaKnown RBP eCLIP8.35□□□□□ -1.07
VNN3-205ENST00000417437 PDE4DIPQ5VU43 2346 aa8.35□□□□□ -1.07
VNN3-205ENST00000417437 ABCC4O15439 1325 aa8.34□□□□□ -1.07
VNN3-205ENST00000417437 BTBD11A6QL63 1104 aa8.34□□□□□ -1.07
VNN3-205ENST00000417437 GOLGA6L22H0YM25 854 aa8.34□□□□□ -1.07
VNN3-205ENST00000417437 FZD9O00144 591 aa8.34□□□□□ -1.07
VNN3-205ENST00000417437 AOC2O75106 756 aa8.34□□□□□ -1.07
VNN3-205ENST00000417437 PIP4K2AP48426 406 aaPredicted RBP8.34□□□□□ -1.07
VNN3-205ENST00000417437 FXR2P51116 673 aaKnown RBP eCLIP8.34□□□□□ -1.07
VNN3-205ENST00000417437 OLFM4Q6UX06 510 aa8.34□□□□□ -1.07
VNN3-205ENST00000417437 CLEC4GQ6UXB4 293 aa8.34□□□□□ -1.07
VNN3-205ENST00000417437 GAS2L2Q8NHY3 880 aa8.34□□□□□ -1.07
VNN3-205ENST00000417437 C7orf43Q8WVR3 580 aa8.34□□□□□ -1.07
VNN3-205ENST00000417437 RPGRQ92834 1020 aaKnown RBP8.34□□□□□ -1.07
VNN3-205ENST00000417437 ZNF408Q9H9D4 720 aa8.34□□□□□ -1.07
VNN3-205ENST00000417437 DLG5Q8TDM6 1919 aa8.34□□□□□ -1.07
VNN3-205ENST00000417437 ADAMTSL1Q8N6G6 1762 aa8.33□□□□□ -1.08
VNN3-205ENST00000417437 K7ELQ4 463 aaPredicted RBP8.33□□□□□ -1.08
VNN3-205ENST00000417437 TRAF5O00463 557 aa8.33□□□□□ -1.08
VNN3-205ENST00000417437 CELF2O95319 508 aaKnown RBP8.33□□□□□ -1.08
VNN3-205ENST00000417437 ATXN8OSP0DMR3 200 aa8.33□□□□□ -1.08
VNN3-205ENST00000417437 EPS15P42566 896 aa8.33□□□□□ -1.08
VNN3-205ENST00000417437 FMR1Q06787 632 aaKnown RBP eCLIP8.33□□□□□ -1.08
VNN3-205ENST00000417437 RAB3GAP1Q15042 981 aa8.33□□□□□ -1.08
VNN3-205ENST00000417437 CC2D2BQ6DHV5 1058 aa8.33□□□□□ -1.08
VNN3-205ENST00000417437 TBC1D9Q6ZT07 1266 aa8.33□□□□□ -1.08
VNN3-205ENST00000417437 USP50Q70EL3 339 aaPredicted RBP8.33□□□□□ -1.08
VNN3-205ENST00000417437 NIM1KQ8IY84 436 aa8.33□□□□□ -1.08
VNN3-205ENST00000417437 TSPYL6Q8N831 410 aa8.33□□□□□ -1.08
VNN3-205ENST00000417437 TNPO1Q92973 898 aaKnown RBP8.33□□□□□ -1.08
VNN3-205ENST00000417437 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.33□□□□□ -1.08
VNN3-205ENST00000417437 TLL2Q9Y6L7 1015 aa8.33□□□□□ -1.08
VNN3-205ENST00000417437 BCORQ6W2J9 1755 aa8.33□□□□□ -1.08
VNN3-205ENST00000417437 ELL2O00472 640 aaPredicted RBP8.32□□□□□ -1.08
VNN3-205ENST00000417437 MYCNP04198 464 aaPredicted RBP8.32□□□□□ -1.08
VNN3-205ENST00000417437 INTS3Q68E01 1043 aaKnown RBP8.32□□□□□ -1.08
VNN3-205ENST00000417437 CASC1Q6TDU7 716 aa8.32□□□□□ -1.08
VNN3-205ENST00000417437 RPAP2Q8IXW5 612 aaPredicted RBP8.32□□□□□ -1.08
VNN3-205ENST00000417437 C8orf58Q8NAV2 365 aa8.32□□□□□ -1.08
VNN3-205ENST00000417437 PSMD1Q99460 953 aa8.32□□□□□ -1.08
VNN3-205ENST00000417437 THUMPD2Q9BTF0 503 aaKnown RBP8.32□□□□□ -1.08
VNN3-205ENST00000417437 NYXQ9GZU5 481 aa8.32□□□□□ -1.08
VNN3-205ENST00000417437 DCTPP1Q9H773 170 aa8.32□□□□□ -1.08
VNN3-205ENST00000417437 C1orf115Q9H7X2 142 aa8.32□□□□□ -1.08
VNN3-205ENST00000417437 GRPEL1Q9HAV7 217 aa8.32□□□□□ -1.08
VNN3-205ENST00000417437 SNRPA1P09661 255 aaKnown RBP8.31□□□□□ -1.08
VNN3-205ENST00000417437 RABEP1Q15276 862 aa8.31□□□□□ -1.08
VNN3-205ENST00000417437 GRIPAP1Q4V328 841 aa8.31□□□□□ -1.08
VNN3-205ENST00000417437 CST9Q5W186 159 aa8.31□□□□□ -1.08
VNN3-205ENST00000417437 CIAPIN1Q6FI81 312 aa8.31□□□□□ -1.08
VNN3-205ENST00000417437 PLEKHM2Q8IWE5 1019 aa8.31□□□□□ -1.08
VNN3-205ENST00000417437 SIRT2Q8IXJ6 389 aa8.31□□□□□ -1.08
VNN3-205ENST00000417437 IL17REQ8NFR9 667 aa8.31□□□□□ -1.08
VNN3-205ENST00000417437 RTF1Q92541 710 aaKnown RBP8.31□□□□□ -1.08
VNN3-205ENST00000417437 KIF2CQ99661 725 aa8.31□□□□□ -1.08
VNN3-205ENST00000417437 RRAGDQ9NQL2 400 aaPredicted RBP8.31□□□□□ -1.08
VNN3-205ENST00000417437 ADARB2Q9NS39 739 aaKnown RBP8.31□□□□□ -1.08
VNN3-205ENST00000417437 USP16Q9Y5T5 823 aa8.31□□□□□ -1.08
VNN3-205ENST00000417437 PPIP5K2O43314 1243 aa8.3□□□□□ -1.08
VNN3-205ENST00000417437 NUCB2P80303 420 aa8.3□□□□□ -1.08
VNN3-205ENST00000417437 TTC22Q5TAA0 569 aa8.3□□□□□ -1.08
VNN3-205ENST00000417437 CLEC17AQ6ZS10 378 aa8.3□□□□□ -1.08
VNN3-205ENST00000417437 ANKRD44Q8N8A2 993 aa8.3□□□□□ -1.08
VNN3-205ENST00000417437 RBM17Q96I25 401 aaKnown RBP8.3□□□□□ -1.08
VNN3-205ENST00000417437 AKAP11Q9UKA4 1901 aa8.3□□□□□ -1.08
VNN3-205ENST00000417437 SIPA1L3O60292 1781 aaPredicted RBP8.3□□□□□ -1.08
VNN3-205ENST00000417437 THSD7BQ9C0I4 1608 aa8.29□□□□□ -1.08
VNN3-205ENST00000417437 KLRG2A4D1S0 409 aaPredicted RBP8.29□□□□□ -1.08
VNN3-205ENST00000417437 PPEF1O14829 653 aaPredicted RBP8.29□□□□□ -1.08
VNN3-205ENST00000417437 KCNQ3O43525 872 aa8.29□□□□□ -1.08
VNN3-205ENST00000417437 CLCN1P35523 988 aa8.29□□□□□ -1.08
VNN3-205ENST00000417437 SCNN1DP51172 638 aa8.29□□□□□ -1.08
VNN3-205ENST00000417437 SOX10P56693 466 aa8.29□□□□□ -1.08
VNN3-205ENST00000417437 NOGQ13253 232 aa8.29□□□□□ -1.08
VNN3-205ENST00000417437 KIF6Q6ZMV9 814 aa8.29□□□□□ -1.08
VNN3-205ENST00000417437 SAPCD2Q86UD0 394 aa8.29□□□□□ -1.08
VNN3-205ENST00000417437 NUTM1Q86Y26 1132 aa8.29□□□□□ -1.08
VNN3-205ENST00000417437 GLIS2Q9BZE0 524 aaPredicted RBP8.29□□□□□ -1.08
VNN3-205ENST00000417437 CWC22Q9HCG8 908 aaKnown RBP8.29□□□□□ -1.08
VNN3-205ENST00000417437 GPRC5DQ9NZD1 345 aa8.29□□□□□ -1.08
VNN3-205ENST00000417437 PTPRCP08575 1304 aa8.29□□□□□ -1.08
VNN3-205ENST00000417437 CHL1O00533 1208 aa8.28□□□□□ -1.08
VNN3-205ENST00000417437 HMMRO75330 724 aa8.28□□□□□ -1.08
VNN3-205ENST00000417437 HUNKP57058 714 aa8.28□□□□□ -1.08
VNN3-205ENST00000417437 AOC3Q16853 763 aa8.28□□□□□ -1.08
VNN3-205ENST00000417437 CDC37L1Q7L3B6 337 aa8.28□□□□□ -1.08
VNN3-205ENST00000417437 SUPT20HQ8NEM7 779 aa8.28□□□□□ -1.08
VNN3-205ENST00000417437 ANP32BQ92688 251 aaKnown RBP8.28□□□□□ -1.08
VNN3-205ENST00000417437 TRIM44Q96DX7 344 aaPredicted RBP8.28□□□□□ -1.08
VNN3-205ENST00000417437 USP26Q9BXU7 913 aa8.28□□□□□ -1.08
VNN3-205ENST00000417437 PANK2Q9BZ23 570 aa8.28□□□□□ -1.08
VNN3-205ENST00000417437 ZBTB12Q9Y330 459 aaPredicted RBP8.28□□□□□ -1.08
VNN3-205ENST00000417437 LTBP1Q14766 1721 aa8.28□□□□□ -1.08
VNN3-205ENST00000417437 NUP98P52948 1817 aa8.27□□□□□ -1.09
VNN3-205ENST00000417437 PRAMEF22A3QJZ6 481 aa8.27□□□□□ -1.09
VNN3-205ENST00000417437 H7C1D1 291 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms