RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 RTL9Q8NET4 1388 aa13.9□□□□□ -0.18
TM9SF4-203ENST00000417389 SNED1Q8TER0 1413 aa13.9□□□□□ -0.19
TM9SF4-203ENST00000417389 COL4A1P02462 1669 aa13.89□□□□□ -0.19
TM9SF4-203ENST00000417389 IQCA1LA6NCM1 817 aa13.89□□□□□ -0.19
TM9SF4-203ENST00000417389 FZD9O00144 591 aa13.89□□□□□ -0.19
TM9SF4-203ENST00000417389 TOMM70O94826 608 aa13.89□□□□□ -0.19
TM9SF4-203ENST00000417389 UBTFL1P0CB47 393 aaPredicted RBP13.89□□□□□ -0.19
TM9SF4-203ENST00000417389 LMOD1P29536 600 aaPredicted RBP13.89□□□□□ -0.19
TM9SF4-203ENST00000417389 BRPF1P55201 1214 aaPredicted RBP13.89□□□□□ -0.19
TM9SF4-203ENST00000417389 DOK7Q18PE1 504 aa13.89□□□□□ -0.19
TM9SF4-203ENST00000417389 EPHA10Q5JZY3 1008 aa13.89□□□□□ -0.19
TM9SF4-203ENST00000417389 BICC1Q9H694 974 aaKnown RBP13.89□□□□□ -0.19
TM9SF4-203ENST00000417389 DBNDD1Q9H9R9 158 aa13.89□□□□□ -0.19
TM9SF4-203ENST00000417389 CNNM1Q9NRU3 951 aa13.89□□□□□ -0.19
TM9SF4-203ENST00000417389 ZNRF3Q9ULT6 936 aa13.89□□□□□ -0.19
TM9SF4-203ENST00000417389 MYH3P11055 1940 aa13.89□□□□□ -0.19
TM9SF4-203ENST00000417389 DICER1Q9UPY3 1922 aaKnown RBP13.89□□□□□ -0.19
TM9SF4-203ENST00000417389 PLIN1O60240 522 aa13.88□□□□□ -0.19
TM9SF4-203ENST00000417389 RAD17O75943 681 aa13.88□□□□□ -0.19
TM9SF4-203ENST00000417389 ATP2B4P23634 1241 aa13.88□□□□□ -0.19
TM9SF4-203ENST00000417389 EAPPQ56P03 285 aaPredicted RBP13.88□□□□□ -0.19
TM9SF4-203ENST00000417389 ZKSCAN2Q63HK3 967 aa13.88□□□□□ -0.19
TM9SF4-203ENST00000417389 ATF7IPQ6VMQ6 1270 aa13.88□□□□□ -0.19
TM9SF4-203ENST00000417389 FTSJ3Q8IY81 847 aaKnown RBP13.88□□□□□ -0.19
TM9SF4-203ENST00000417389 GPC2Q8N158 579 aa13.88□□□□□ -0.19
TM9SF4-203ENST00000417389 ARHGAP45Q92619 1136 aa13.88□□□□□ -0.19
TM9SF4-203ENST00000417389 ZNF594Q96JF6 807 aaPredicted RBP13.88□□□□□ -0.19
TM9SF4-203ENST00000417389 ANKRD2Q9GZV1 360 aa13.88□□□□□ -0.19
TM9SF4-203ENST00000417389 MINPP1Q9UNW1 487 aa13.88□□□□□ -0.19
TM9SF4-203ENST00000417389 CIAPIN1Q6FI81 312 aa13.87□□□□□ -0.19
TM9SF4-203ENST00000417389 LDHAL6AQ6ZMR3 332 aa13.87□□□□□ -0.19
TM9SF4-203ENST00000417389 USP44Q9H0E7 712 aa13.87□□□□□ -0.19
TM9SF4-203ENST00000417389 PODXL2Q9NZ53 605 aa13.87□□□□□ -0.19
TM9SF4-203ENST00000417389 HACL1Q9UJ83 578 aa13.87□□□□□ -0.19
TM9SF4-203ENST00000417389 HDAC5Q9UQL6 1122 aa13.87□□□□□ -0.19
TM9SF4-203ENST00000417389 ECE2O60344 883 aa13.86□□□□□ -0.19
TM9SF4-203ENST00000417389 TRIM27P14373 513 aa13.86□□□□□ -0.19
TM9SF4-203ENST00000417389 TNIP1Q15025 636 aa13.86□□□□□ -0.19
TM9SF4-203ENST00000417389 HELBQ8NG08 1087 aaPredicted RBP13.86□□□□□ -0.19
TM9SF4-203ENST00000417389 FBXW7Q969H0 707 aa13.86□□□□□ -0.19
TM9SF4-203ENST00000417389 CLEC11AQ9Y240 323 aa13.86□□□□□ -0.19
TM9SF4-203ENST00000417389 LRRC37AA6NMS7 1700 aa13.86□□□□□ -0.19
TM9SF4-203ENST00000417389 UTYO14607 1347 aa13.86□□□□□ -0.19
TM9SF4-203ENST00000417389 SPEF2Q9C093 1822 aa13.85□□□□□ -0.19
TM9SF4-203ENST00000417389 COL4A5P29400 1685 aa13.85□□□□□ -0.19
TM9SF4-203ENST00000417389 CHRNDQ07001 517 aa13.85□□□□□ -0.19
TM9SF4-203ENST00000417389 CXCL9Q07325 125 aa13.85□□□□□ -0.19
TM9SF4-203ENST00000417389 SMC1BQ8NDV3 1235 aa13.85□□□□□ -0.19
TM9SF4-203ENST00000417389 RBM46Q8TBY0 533 aaKnown RBP13.85□□□□□ -0.19
TM9SF4-203ENST00000417389 DUOX1Q9NRD9 1551 aa13.84□□□□□ -0.19
TM9SF4-203ENST00000417389 TAF5LO75529 589 aa13.84□□□□□ -0.19
TM9SF4-203ENST00000417389 EPHX2P34913 555 aa13.84□□□□□ -0.19
TM9SF4-203ENST00000417389 KAZALD1Q96I82 304 aa13.84□□□□□ -0.19
TM9SF4-203ENST00000417389 L3MBTL3Q96JM7 780 aaPredicted RBP13.84□□□□□ -0.19
TM9SF4-203ENST00000417389 TNNQ9UQP3 1299 aa13.84□□□□□ -0.19
TM9SF4-203ENST00000417389 LEMD3Q9Y2U8 911 aa13.84□□□□□ -0.19
TM9SF4-203ENST00000417389 ZNF804BA4D1E1 1349 aa13.84□□□□□ -0.19
TM9SF4-203ENST00000417389 POTECB2RU33 542 aa13.83□□□□□ -0.2
TM9SF4-203ENST00000417389 GNAI3P08754 354 aa13.83□□□□□ -0.2
TM9SF4-203ENST00000417389 GMPSP49915 693 aaPredicted RBP13.83□□□□□ -0.2
TM9SF4-203ENST00000417389 INTS3Q68E01 1043 aaKnown RBP13.83□□□□□ -0.2
TM9SF4-203ENST00000417389 ITPRIPQ8IWB1 547 aa13.83□□□□□ -0.2
TM9SF4-203ENST00000417389 ANKRD44Q8N8A2 993 aa13.83□□□□□ -0.2
TM9SF4-203ENST00000417389 MEIS3Q99687 375 aa13.83□□□□□ -0.2
TM9SF4-203ENST00000417389 TAF1DQ9H5J8 278 aaPredicted RBP13.83□□□□□ -0.2
TM9SF4-203ENST00000417389 LRRFIP2Q9Y608 721 aaKnown RBP13.83□□□□□ -0.2
TM9SF4-203ENST00000417389 WDR90Q96KV7 1748 aa13.83□□□□□ -0.2
TM9SF4-203ENST00000417389 WTIPA6NIX2 430 aaPredicted RBP13.82□□□□□ -0.2
TM9SF4-203ENST00000417389 YDJCA8MPS7 323 aa13.82□□□□□ -0.2
TM9SF4-203ENST00000417389 PSMD14O00487 310 aa13.82□□□□□ -0.2
TM9SF4-203ENST00000417389 RABL6Q3YEC7 729 aaPredicted RBP13.82□□□□□ -0.2
TM9SF4-203ENST00000417389 PNMA8AQ86V59 439 aaPredicted RBP13.82□□□□□ -0.2
TM9SF4-203ENST00000417389 DZIP1LQ8IYY4 767 aaKnown RBP13.82□□□□□ -0.2
TM9SF4-203ENST00000417389 EPS15P42566 896 aa13.81□□□□□ -0.2
TM9SF4-203ENST00000417389 FSTL1Q12841 308 aa13.81□□□□□ -0.2
TM9SF4-203ENST00000417389 METTL24Q5JXM2 366 aa13.81□□□□□ -0.2
TM9SF4-203ENST00000417389 TMEM57Q8N5G2 664 aa13.81□□□□□ -0.2
TM9SF4-203ENST00000417389 KLHDC4Q8TBB5 520 aa13.81□□□□□ -0.2
TM9SF4-203ENST00000417389 PUS3Q9BZE2 481 aaKnown RBP13.81□□□□□ -0.2
TM9SF4-203ENST00000417389 KCNQ5Q9NR82 932 aa13.81□□□□□ -0.2
TM9SF4-203ENST00000417389 RCAN3Q9UKA8 241 aa13.81□□□□□ -0.2
TM9SF4-203ENST00000417389 ZBTB12Q9Y330 459 aaPredicted RBP13.81□□□□□ -0.2
TM9SF4-203ENST00000417389 MED23Q9ULK4 1368 aa13.81□□□□□ -0.2
TM9SF4-203ENST00000417389 H7C1D1 291 aa13.8□□□□□ -0.2
TM9SF4-203ENST00000417389 SNAP23O00161 211 aa13.8□□□□□ -0.2
TM9SF4-203ENST00000417389 POTEIP0CG38 1075 aa13.8□□□□□ -0.2
TM9SF4-203ENST00000417389 POTEJP0CG39 1038 aa13.8□□□□□ -0.2
TM9SF4-203ENST00000417389 SCNN1DP51172 638 aa13.8□□□□□ -0.2
TM9SF4-203ENST00000417389 CHADLQ6NUI6 762 aa13.8□□□□□ -0.2
TM9SF4-203ENST00000417389 LDHDQ86WU2 507 aa13.8□□□□□ -0.2
TM9SF4-203ENST00000417389 SIL1Q9H173 461 aa13.8□□□□□ -0.2
TM9SF4-203ENST00000417389 GPRC5DQ9NZD1 345 aa13.8□□□□□ -0.2
TM9SF4-203ENST00000417389 GNAI2P04899 355 aa13.79□□□□□ -0.2
TM9SF4-203ENST00000417389 MS4A1P11836 297 aa13.79□□□□□ -0.2
TM9SF4-203ENST00000417389 HSPA6P17066 643 aa13.79□□□□□ -0.2
TM9SF4-203ENST00000417389 KLRK1P26718 216 aa13.79□□□□□ -0.2
TM9SF4-203ENST00000417389 LRRC24Q50LG9 513 aa13.79□□□□□ -0.2
TM9SF4-203ENST00000417389 ZNF804AQ7Z570 1209 aa13.79□□□□□ -0.2
TM9SF4-203ENST00000417389 PODNQ7Z5L7 613 aa13.79□□□□□ -0.2
TM9SF4-203ENST00000417389 MICALL2Q8IY33 904 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms