RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 PSMD14O00487 310 aa22.48■■□□□ 1.19
PDLIM2-208ENST00000416159 ECE2O60344 883 aa22.48■■□□□ 1.19
PDLIM2-208ENST00000416159 UFL1O94874 794 aa22.48■■□□□ 1.19
PDLIM2-208ENST00000416159 FKBP5Q13451 457 aaPredicted RBP22.48■■□□□ 1.19
PDLIM2-208ENST00000416159 DOK7Q18PE1 504 aa22.48■■□□□ 1.19
PDLIM2-208ENST00000416159 TTLL11Q8NHH1 800 aa22.48■■□□□ 1.19
PDLIM2-208ENST00000416159 DNAAF4Q8WXU2 420 aa22.48■■□□□ 1.19
PDLIM2-208ENST00000416159 G3V3G9 751 aa22.47■■□□□ 1.19
PDLIM2-208ENST00000416159 DEFB115Q30KQ5 88 aa22.47■■□□□ 1.19
PDLIM2-208ENST00000416159 DCAF8Q5TAQ9 597 aa22.47■■□□□ 1.19
PDLIM2-208ENST00000416159 ZC3H15Q8WU90 426 aaKnown RBP22.47■■□□□ 1.19
PDLIM2-208ENST00000416159 MYH16Q9H6N6 1097 aa22.47■■□□□ 1.19
PDLIM2-208ENST00000416159 PGAP2Q9UHJ9 254 aa22.47■■□□□ 1.19
PDLIM2-208ENST00000416159 RASSF10A6NK89 507 aa22.46■■□□□ 1.19
PDLIM2-208ENST00000416159 VEGFBP49765 207 aa22.46■■□□□ 1.19
PDLIM2-208ENST00000416159 GCKRQ14397 625 aa22.46■■□□□ 1.19
PDLIM2-208ENST00000416159 UBE3BQ7Z3V4 1068 aa22.46■■□□□ 1.19
PDLIM2-208ENST00000416159 GPR101Q96P66 508 aaPredicted RBP22.46■■□□□ 1.19
PDLIM2-208ENST00000416159 MYH3P11055 1940 aa22.45■■□□□ 1.18
PDLIM2-208ENST00000416159 ATP2B4P23634 1241 aa22.45■■□□□ 1.18
PDLIM2-208ENST00000416159 RPS12P25398 132 aaKnown RBP22.45■■□□□ 1.18
PDLIM2-208ENST00000416159 MICALL2Q8IY33 904 aa22.45■■□□□ 1.18
PDLIM2-208ENST00000416159 LINS1Q8NG48 757 aa22.45■■□□□ 1.18
PDLIM2-208ENST00000416159 PLA2G12BQ9BX93 195 aa22.45■■□□□ 1.18
PDLIM2-208ENST00000416159 SPINK5Q9NQ38 1064 aaPredicted RBP22.45■■□□□ 1.18
PDLIM2-208ENST00000416159 BSDC1Q9NW68 430 aaPredicted RBP22.45■■□□□ 1.18
PDLIM2-208ENST00000416159 ABT1Q9ULW3 272 aaKnown RBP22.45■■□□□ 1.18
PDLIM2-208ENST00000416159 ZBTB12Q9Y330 459 aaPredicted RBP22.45■■□□□ 1.18
PDLIM2-208ENST00000416159 XDHP47989 1333 aa22.45■■□□□ 1.18
PDLIM2-208ENST00000416159 HIRAP54198 1017 aaPredicted RBP22.44■■□□□ 1.18
PDLIM2-208ENST00000416159 FMR1Q06787 632 aaKnown RBP eCLIP22.44■■□□□ 1.18
PDLIM2-208ENST00000416159 RTL9Q8NET4 1388 aa22.44■■□□□ 1.18
PDLIM2-208ENST00000416159 TRPM4Q8TD43 1214 aa22.44■■□□□ 1.18
PDLIM2-208ENST00000416159 GREM2Q9H772 168 aa22.44■■□□□ 1.18
PDLIM2-208ENST00000416159 TRPM7Q96QT4 1865 aa22.43■■□□□ 1.18
PDLIM2-208ENST00000416159 TRAF5O00463 557 aa22.43■■□□□ 1.18
PDLIM2-208ENST00000416159 COL13A1Q5TAT6 717 aaPredicted RBP22.43■■□□□ 1.18
PDLIM2-208ENST00000416159 KCNQ5Q9NR82 932 aa22.43■■□□□ 1.18
PDLIM2-208ENST00000416159 SHTN1A0MZ66 631 aa22.42■■□□□ 1.18
PDLIM2-208ENST00000416159 VIL1P09327 827 aaKnown RBP22.42■■□□□ 1.18
PDLIM2-208ENST00000416159 CDC37L1Q7L3B6 337 aa22.42■■□□□ 1.18
PDLIM2-208ENST00000416159 CASP7P55210 303 aa22.41■■□□□ 1.18
PDLIM2-208ENST00000416159 CST9Q5W186 159 aa22.41■■□□□ 1.18
PDLIM2-208ENST00000416159 GLIS2Q9BZE0 524 aaPredicted RBP22.41■■□□□ 1.18
PDLIM2-208ENST00000416159 MINPP1Q9UNW1 487 aa22.41■■□□□ 1.18
PDLIM2-208ENST00000416159 IGHMBP2P38935 993 aaKnown RBP22.4■■□□□ 1.18
PDLIM2-208ENST00000416159 SAMD7Q7Z3H4 446 aa22.4■■□□□ 1.18
PDLIM2-208ENST00000416159 WDR33Q9C0J8 1336 aaKnown RBP22.39■■□□□ 1.18
PDLIM2-208ENST00000416159 CSF1RP07333 972 aa22.39■■□□□ 1.17
PDLIM2-208ENST00000416159 TLL2Q9Y6L7 1015 aa22.39■■□□□ 1.17
PDLIM2-208ENST00000416159 SCN9AQ15858 1988 aa22.38■■□□□ 1.17
PDLIM2-208ENST00000416159 CELF2O95319 508 aaKnown RBP22.38■■□□□ 1.17
PDLIM2-208ENST00000416159 ITGA6P23229 1130 aa22.38■■□□□ 1.17
PDLIM2-208ENST00000416159 ECE1P42892 770 aa22.38■■□□□ 1.17
PDLIM2-208ENST00000416159 TBC1D10BQ4KMP7 808 aaPredicted RBP22.38■■□□□ 1.17
PDLIM2-208ENST00000416159 PODNQ7Z5L7 613 aa22.38■■□□□ 1.17
PDLIM2-208ENST00000416159 F6X3S4 739 aa22.37■■□□□ 1.17
PDLIM2-208ENST00000416159 CCT4P50991 539 aaKnown RBP22.37■■□□□ 1.17
PDLIM2-208ENST00000416159 BEND3Q5T5X7 828 aa22.37■■□□□ 1.17
PDLIM2-208ENST00000416159 AGBL3Q8NEM8 1001 aa22.37■■□□□ 1.17
PDLIM2-208ENST00000416159 AIDAQ96BJ3 306 aa22.37■■□□□ 1.17
PDLIM2-208ENST00000416159 ZNF521Q96K83 1311 aa22.36■■□□□ 1.17
PDLIM2-208ENST00000416159 RBM26Q5T8P6 1007 aaKnown RBP22.36■■□□□ 1.17
PDLIM2-208ENST00000416159 RSBN1LQ6PCB5 846 aaPredicted RBP22.36■■□□□ 1.17
PDLIM2-208ENST00000416159 MPHOSPH8Q99549 860 aa22.36■■□□□ 1.17
PDLIM2-208ENST00000416159 WBP1LQ9NX94 342 aa22.36■■□□□ 1.17
PDLIM2-208ENST00000416159 LEMD3Q9Y2U8 911 aa22.36■■□□□ 1.17
PDLIM2-208ENST00000416159 MED23Q9ULK4 1368 aa22.36■■□□□ 1.17
PDLIM2-208ENST00000416159 FOXN1O15353 648 aa22.35■■□□□ 1.17
PDLIM2-208ENST00000416159 FAM161AQ3B820 660 aa22.35■■□□□ 1.17
PDLIM2-208ENST00000416159 PAXIP1Q6ZW49 1069 aaPredicted RBP22.35■■□□□ 1.17
PDLIM2-208ENST00000416159 USP48Q86UV5 1035 aa22.35■■□□□ 1.17
PDLIM2-208ENST00000416159 TNS4Q8IZW8 715 aa22.35■■□□□ 1.17
PDLIM2-208ENST00000416159 CAPNS2Q96L46 248 aa22.35■■□□□ 1.17
PDLIM2-208ENST00000416159 ANKRD2Q9GZV1 360 aa22.35■■□□□ 1.17
PDLIM2-208ENST00000416159 SPEF2Q9C093 1822 aa22.34■■□□□ 1.17
PDLIM2-208ENST00000416159 ZNF609O15014 1411 aa22.34■■□□□ 1.17
PDLIM2-208ENST00000416159 ANKRD18BA2A2Z9 1011 aa22.34■■□□□ 1.17
PDLIM2-208ENST00000416159 USP17L3A6NCW0 530 aa22.34■■□□□ 1.17
PDLIM2-208ENST00000416159 USP17L4A6NCW7 530 aa22.34■■□□□ 1.17
PDLIM2-208ENST00000416159 MAP2K1Q02750 393 aaPredicted RBP22.34■■□□□ 1.17
PDLIM2-208ENST00000416159 KIF4BQ2VIQ3 1234 aa22.34■■□□□ 1.17
PDLIM2-208ENST00000416159 USP17L1Q7RTZ2 530 aa22.34■■□□□ 1.17
PDLIM2-208ENST00000416159 DCPSQ96C86 337 aaKnown RBP22.34■■□□□ 1.17
PDLIM2-208ENST00000416159 POLR2AP24928 1970 aaKnown RBP22.34■■□□□ 1.17
PDLIM2-208ENST00000416159 PCNTO95613 3336 aa22.33■■□□□ 1.17
PDLIM2-208ENST00000416159 EGFRP00533 1210 aa22.33■■□□□ 1.17
PDLIM2-208ENST00000416159 CTCFP49711 727 aaPredicted RBP22.33■■□□□ 1.17
PDLIM2-208ENST00000416159 SAPCD2Q86UD0 394 aa22.33■■□□□ 1.17
PDLIM2-208ENST00000416159 ZNF408Q9H9D4 720 aa22.33■■□□□ 1.17
PDLIM2-208ENST00000416159 PSME4Q14997 1843 aa22.32■■□□□ 1.16
PDLIM2-208ENST00000416159 WTIPA6NIX2 430 aaPredicted RBP22.32■■□□□ 1.16
PDLIM2-208ENST00000416159 ALDH1L1O75891 902 aa22.32■■□□□ 1.16
PDLIM2-208ENST00000416159 ZNF280AP59817 542 aaPredicted RBP22.32■■□□□ 1.16
PDLIM2-208ENST00000416159 CYP4F22Q6NT55 531 aa22.32■■□□□ 1.16
PDLIM2-208ENST00000416159 KRT26Q7Z3Y9 468 aa22.32■■□□□ 1.16
PDLIM2-208ENST00000416159 HHIPL1Q96JK4 782 aa22.32■■□□□ 1.16
PDLIM2-208ENST00000416159 COA1Q9GZY4 146 aa22.32■■□□□ 1.16
PDLIM2-208ENST00000416159 FOXO4P98177 505 aa22.31■■□□□ 1.16
PDLIM2-208ENST00000416159 GMLQ99445 158 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms