RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 PRDM11Q9NQV5 511 aa14.83□□□□□ -0.04
SCN1B-202ENST00000415950 CHD1O14646 1710 aa14.82□□□□□ -0.04
SCN1B-202ENST00000415950 PTPDC1A2A3K4 754 aa14.82□□□□□ -0.04
SCN1B-202ENST00000415950 TIMM10P62072 90 aa14.82□□□□□ -0.04
SCN1B-202ENST00000415950 TRMT1LQ7Z2T5 733 aaKnown RBP14.82□□□□□ -0.04
SCN1B-202ENST00000415950 PAFAH1B1P43034 410 aa14.82□□□□□ -0.04
SCN1B-202ENST00000415950 ARFGAP3Q9NP61 516 aa14.82□□□□□ -0.04
SCN1B-202ENST00000415950 ABCC2Q92887 1545 aa14.82□□□□□ -0.04
SCN1B-202ENST00000415950 CCDC102BQ68D86 513 aa14.82□□□□□ -0.04
SCN1B-202ENST00000415950 OGFRQ9NZT2 677 aa14.82□□□□□ -0.04
SCN1B-202ENST00000415950 FANCAO15360 1455 aa14.82□□□□□ -0.04
SCN1B-202ENST00000415950 IARSP41252 1262 aaKnown RBP14.82□□□□□ -0.04
SCN1B-202ENST00000415950 RBM5P52756 815 aaKnown RBP eCLIP14.82□□□□□ -0.04
SCN1B-202ENST00000415950 MAP2K1Q02750 393 aaPredicted RBP14.82□□□□□ -0.04
SCN1B-202ENST00000415950 IFFO1Q0D2I5 559 aa14.82□□□□□ -0.04
SCN1B-202ENST00000415950 PTPN21Q16825 1174 aa14.82□□□□□ -0.04
SCN1B-202ENST00000415950 CCDC178Q5BJE1 867 aa14.82□□□□□ -0.04
SCN1B-202ENST00000415950 TTC6Q86TZ1 520 aa14.82□□□□□ -0.04
SCN1B-202ENST00000415950 GOLGA8AA7E2F4 631 aa14.81□□□□□ -0.04
SCN1B-202ENST00000415950 RSPH14Q9UHP6 348 aa14.81□□□□□ -0.04
SCN1B-202ENST00000415950 CEP131Q9UPN4 1083 aa14.81□□□□□ -0.04
SCN1B-202ENST00000415950 IQSEC3Q9UPP2 1182 aaPredicted RBP14.81□□□□□ -0.04
SCN1B-202ENST00000415950 DNMT1P26358 1616 aaKnown RBP14.81□□□□□ -0.04
SCN1B-202ENST00000415950 ATP2C2O75185 946 aa14.81□□□□□ -0.04
SCN1B-202ENST00000415950 ADCK5Q3MIX3 580 aa14.81□□□□□ -0.04
SCN1B-202ENST00000415950 MAP9Q49MG5 647 aa14.81□□□□□ -0.04
SCN1B-202ENST00000415950 LEO1Q8WVC0 666 aaPredicted RBP14.81□□□□□ -0.04
SCN1B-202ENST00000415950 GOPCQ9HD26 462 aa14.81□□□□□ -0.04
SCN1B-202ENST00000415950 ZNF215Q9UL58 517 aaPredicted RBP14.81□□□□□ -0.04
SCN1B-202ENST00000415950 MAP3K19Q56UN5 1328 aa14.81□□□□□ -0.04
SCN1B-202ENST00000415950 NR1I2O75469 434 aa14.81□□□□□ -0.04
SCN1B-202ENST00000415950 HMGB1P09429 215 aaKnown RBP14.81□□□□□ -0.04
SCN1B-202ENST00000415950 IDEP14735 1019 aa14.81□□□□□ -0.04
SCN1B-202ENST00000415950 ZNF75DP51815 510 aa14.81□□□□□ -0.04
SCN1B-202ENST00000415950 ANKRD13DQ6ZTN6 518 aa14.81□□□□□ -0.04
SCN1B-202ENST00000415950 PLEKHF1Q96S99 279 aa14.81□□□□□ -0.04
SCN1B-202ENST00000415950 DENND4BO75064 1496 aaPredicted RBP14.81□□□□□ -0.04
SCN1B-202ENST00000415950 RHOXF2BP0C7M4 288 aa14.8□□□□□ -0.04
SCN1B-202ENST00000415950 ZNF76P36508 570 aa14.8□□□□□ -0.04
SCN1B-202ENST00000415950 RHOXF2Q9BQY4 288 aa14.8□□□□□ -0.04
SCN1B-202ENST00000415950 DRC1Q96MC2 740 aa14.8□□□□□ -0.04
SCN1B-202ENST00000415950 RABEP2Q9H5N1 569 aa14.8□□□□□ -0.04
SCN1B-202ENST00000415950 HYPKQ9NX55 129 aa14.8□□□□□ -0.04
SCN1B-202ENST00000415950 SLC12A7Q9Y666 1083 aa14.8□□□□□ -0.04
SCN1B-202ENST00000415950 SPTLC2O15270 562 aa14.8□□□□□ -0.04
SCN1B-202ENST00000415950 ZRSR2Q15696 482 aaKnown RBP14.8□□□□□ -0.04
SCN1B-202ENST00000415950 FKBP15Q5T1M5 1219 aa14.8□□□□□ -0.04
SCN1B-202ENST00000415950 GSTTP1A0A1W2PQM5 241 aa14.8□□□□□ -0.04
SCN1B-202ENST00000415950 HSPA4P34932 840 aa14.8□□□□□ -0.04
SCN1B-202ENST00000415950 NAA30Q147X3 362 aaPredicted RBP14.8□□□□□ -0.04
SCN1B-202ENST00000415950 ALG1Q9BT22 464 aa14.8□□□□□ -0.04
SCN1B-202ENST00000415950 LGR6Q9HBX8 967 aa14.8□□□□□ -0.04
SCN1B-202ENST00000415950 ERCC6LQ2NKX8 1250 aa14.79□□□□□ -0.04
SCN1B-202ENST00000415950 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.79□□□□□ -0.04
SCN1B-202ENST00000415950 CARD6Q9BX69 1037 aa14.79□□□□□ -0.04
SCN1B-202ENST00000415950 BICC1Q9H694 974 aaKnown RBP14.79□□□□□ -0.04
SCN1B-202ENST00000415950 MCMDC2Q4G0Z9 681 aa14.79□□□□□ -0.04
SCN1B-202ENST00000415950 SPTY2D1Q68D10 685 aaPredicted RBP14.79□□□□□ -0.04
SCN1B-202ENST00000415950 CTR9Q6PD62 1173 aa14.79□□□□□ -0.04
SCN1B-202ENST00000415950 RAD50Q92878 1312 aa14.79□□□□□ -0.04
SCN1B-202ENST00000415950 SLC27A2O14975 620 aa14.79□□□□□ -0.04
SCN1B-202ENST00000415950 MYO1BO43795 1136 aa14.79□□□□□ -0.04
SCN1B-202ENST00000415950 METAP2P50579 478 aaKnown RBP eCLIP14.79□□□□□ -0.04
SCN1B-202ENST00000415950 CHRNA2Q15822 529 aa14.79□□□□□ -0.04
SCN1B-202ENST00000415950 USP44Q9H0E7 712 aa14.79□□□□□ -0.04
SCN1B-202ENST00000415950 ABCC4O15439 1325 aa14.79□□□□□ -0.04
SCN1B-202ENST00000415950 MTIF2P46199 727 aaKnown RBP14.78□□□□□ -0.04
SCN1B-202ENST00000415950 TMEM67Q5HYA8 995 aa14.78□□□□□ -0.04
SCN1B-202ENST00000415950 HMG20BQ9P0W2 317 aa14.78□□□□□ -0.04
SCN1B-202ENST00000415950 YEATS4O95619 227 aa14.78□□□□□ -0.04
SCN1B-202ENST00000415950 TFCP2Q12800 502 aa14.78□□□□□ -0.04
SCN1B-202ENST00000415950 DNAJC21Q5F1R6 531 aaKnown RBP14.78□□□□□ -0.04
SCN1B-202ENST00000415950 MEX3CQ5U5Q3 659 aaKnown RBP14.78□□□□□ -0.04
SCN1B-202ENST00000415950 GPIHBP1Q8IV16 184 aa14.78□□□□□ -0.04
SCN1B-202ENST00000415950 JADE2Q9NQC1 790 aa14.78□□□□□ -0.04
SCN1B-202ENST00000415950 MTMR6Q9Y217 621 aa14.78□□□□□ -0.04
SCN1B-202ENST00000415950 RTL1A6NKG5 1358 aa14.78□□□□□ -0.04
SCN1B-202ENST00000415950 N4BP3O15049 544 aa14.78□□□□□ -0.04
SCN1B-202ENST00000415950 CTCFLQ8NI51 663 aaPredicted RBP14.78□□□□□ -0.04
SCN1B-202ENST00000415950 PHF8Q9UPP1 1060 aa14.78□□□□□ -0.04
SCN1B-202ENST00000415950 WDR7Q9Y4E6 1490 aa14.78□□□□□ -0.04
SCN1B-202ENST00000415950 BCORL1Q5H9F3 1711 aa14.78□□□□□ -0.04
SCN1B-202ENST00000415950 KDM5CP41229 1560 aa14.78□□□□□ -0.04
SCN1B-202ENST00000415950 TMCO5BA8MYB1 307 aa14.78□□□□□ -0.04
SCN1B-202ENST00000415950 CAPN2P17655 700 aa14.78□□□□□ -0.04
SCN1B-202ENST00000415950 PRPF4BQ13523 1007 aaKnown RBP14.78□□□□□ -0.04
SCN1B-202ENST00000415950 LDHAL6AQ6ZMR3 332 aa14.78□□□□□ -0.04
SCN1B-202ENST00000415950 CCDC150Q8NCX0 1101 aa14.78□□□□□ -0.04
SCN1B-202ENST00000415950 FEZ1Q99689 392 aa14.78□□□□□ -0.04
SCN1B-202ENST00000415950 MKNK2Q9HBH9 465 aa14.78□□□□□ -0.04
SCN1B-202ENST00000415950 CAVIN2O95810 425 aa14.77□□□□□ -0.04
SCN1B-202ENST00000415950 MNAT1P51948 309 aa14.77□□□□□ -0.04
SCN1B-202ENST00000415950 TERF1P54274 439 aa14.77□□□□□ -0.04
SCN1B-202ENST00000415950 KSR2Q6VAB6 950 aa14.77□□□□□ -0.04
SCN1B-202ENST00000415950 EZRP15311 586 aaKnown RBP14.77□□□□□ -0.04
SCN1B-202ENST00000415950 UBE4AQ14139 1066 aa14.77□□□□□ -0.04
SCN1B-202ENST00000415950 SEC62Q99442 399 aaKnown RBP14.77□□□□□ -0.04
SCN1B-202ENST00000415950 EVCP57679 992 aa14.77□□□□□ -0.05
SCN1B-202ENST00000415950 CTNNBL1Q8WYA6 563 aaPredicted RBP14.77□□□□□ -0.05
SCN1B-202ENST00000415950 USO1O60763 962 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms