RNA–Protein interactions for RNA: ENST00000415597.5

LMCD1-203, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 5

Gene LMCD1, Length 870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-203ENST00000415597 ATP2B4P23634 1241 aa13.78□□□□□ -0.2
LMCD1-203ENST00000415597 LBX1P52954 281 aa13.78□□□□□ -0.2
LMCD1-203ENST00000415597 TWISTNBQ3B726 338 aaPredicted RBP13.78□□□□□ -0.2
LMCD1-203ENST00000415597 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
LMCD1-203ENST00000415597 PI4KAP1Q8N8J0 262 aa13.78□□□□□ -0.2
LMCD1-203ENST00000415597 GLIS2Q9BZE0 524 aaPredicted RBP13.78□□□□□ -0.2
LMCD1-203ENST00000415597 MRS2Q9HD23 443 aa13.78□□□□□ -0.2
LMCD1-203ENST00000415597 SEC31BQ9NQW1 1179 aa13.78□□□□□ -0.2
LMCD1-203ENST00000415597 PODXL2Q9NZ53 605 aa13.78□□□□□ -0.2
LMCD1-203ENST00000415597 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
LMCD1-203ENST00000415597 SLC4A2P04920 1241 aa13.77□□□□□ -0.21
LMCD1-203ENST00000415597 XDHP47989 1333 aa13.77□□□□□ -0.21
LMCD1-203ENST00000415597 IL16Q14005 1332 aa13.77□□□□□ -0.21
LMCD1-203ENST00000415597 RBM26Q5T8P6 1007 aaKnown RBP13.77□□□□□ -0.21
LMCD1-203ENST00000415597 CST9Q5W186 159 aa13.77□□□□□ -0.21
LMCD1-203ENST00000415597 CYP4F22Q6NT55 531 aa13.77□□□□□ -0.21
LMCD1-203ENST00000415597 WWC1Q8IX03 1113 aa13.77□□□□□ -0.21
LMCD1-203ENST00000415597 ADAMTSL1Q8N6G6 1762 aa13.77□□□□□ -0.21
LMCD1-203ENST00000415597 HHIPL1Q96JK4 782 aa13.77□□□□□ -0.21
LMCD1-203ENST00000415597 CCDC85AQ96PX6 553 aaPredicted RBP13.77□□□□□ -0.21
LMCD1-203ENST00000415597 CA12O43570 354 aa13.76□□□□□ -0.21
LMCD1-203ENST00000415597 FMR1Q06787 632 aaKnown RBP eCLIP13.76□□□□□ -0.21
LMCD1-203ENST00000415597 TBC1D10BQ4KMP7 808 aaPredicted RBP13.76□□□□□ -0.21
LMCD1-203ENST00000415597 SAPCD2Q86UD0 394 aa13.76□□□□□ -0.21
LMCD1-203ENST00000415597 USP48Q86UV5 1035 aa13.76□□□□□ -0.21
LMCD1-203ENST00000415597 SULF1Q8IWU6 871 aa13.76□□□□□ -0.21
LMCD1-203ENST00000415597 C2orf69Q8N8R5 385 aa13.76□□□□□ -0.21
LMCD1-203ENST00000415597 TSR2Q969E8 191 aaKnown RBP13.76□□□□□ -0.21
LMCD1-203ENST00000415597 MYH16Q9H6N6 1097 aa13.76□□□□□ -0.21
LMCD1-203ENST00000415597 IGHMBP2P38935 993 aaKnown RBP13.75□□□□□ -0.21
LMCD1-203ENST00000415597 HIRAP54198 1017 aaPredicted RBP13.75□□□□□ -0.21
LMCD1-203ENST00000415597 CTSWP56202 376 aa13.75□□□□□ -0.21
LMCD1-203ENST00000415597 SAMD7Q7Z3H4 446 aa13.75□□□□□ -0.21
LMCD1-203ENST00000415597 KRT26Q7Z3Y9 468 aa13.75□□□□□ -0.21
LMCD1-203ENST00000415597 PODNQ7Z5L7 613 aa13.75□□□□□ -0.21
LMCD1-203ENST00000415597 TSPYL6Q8N831 410 aa13.75□□□□□ -0.21
LMCD1-203ENST00000415597 TRPM4Q8TD43 1214 aa13.75□□□□□ -0.21
LMCD1-203ENST00000415597 JARID2Q92833 1246 aaPredicted RBP13.75□□□□□ -0.21
LMCD1-203ENST00000415597 VIL1P09327 827 aaKnown RBP13.74□□□□□ -0.21
LMCD1-203ENST00000415597 FKBP5Q13451 457 aaPredicted RBP13.74□□□□□ -0.21
LMCD1-203ENST00000415597 KIF4BQ2VIQ3 1234 aa13.74□□□□□ -0.21
LMCD1-203ENST00000415597 AGBL3Q8NEM8 1001 aa13.74□□□□□ -0.21
LMCD1-203ENST00000415597 MPHOSPH8Q99549 860 aa13.74□□□□□ -0.21
LMCD1-203ENST00000415597 BSDC1Q9NW68 430 aaPredicted RBP13.74□□□□□ -0.21
LMCD1-203ENST00000415597 LAMB2P55268 1798 aa13.73□□□□□ -0.21
LMCD1-203ENST00000415597 HSPA8P11142 646 aaKnown RBP13.73□□□□□ -0.21
LMCD1-203ENST00000415597 HUNKP57058 714 aa13.73□□□□□ -0.21
LMCD1-203ENST00000415597 NOGQ13253 232 aa13.73□□□□□ -0.21
LMCD1-203ENST00000415597 WDR63Q8IWG1 891 aa13.73□□□□□ -0.21
LMCD1-203ENST00000415597 OGFOD1Q8N543 542 aa13.73□□□□□ -0.21
LMCD1-203ENST00000415597 TTLL11Q8NHH1 800 aa13.73□□□□□ -0.21
LMCD1-203ENST00000415597 LTBP1Q14766 1721 aa13.73□□□□□ -0.21
LMCD1-203ENST00000415597 USP17L3A6NCW0 530 aa13.72□□□□□ -0.21
LMCD1-203ENST00000415597 USP17L4A6NCW7 530 aa13.72□□□□□ -0.21
LMCD1-203ENST00000415597 ZNF316A6NFI3 1004 aaPredicted RBP13.72□□□□□ -0.21
LMCD1-203ENST00000415597 NEURL1BA8MQ27 555 aa13.72□□□□□ -0.21
LMCD1-203ENST00000415597 IGKV5-2P06315 115 aa13.72□□□□□ -0.21
LMCD1-203ENST00000415597 USP17L8P0C7I0 530 aa13.72□□□□□ -0.21
LMCD1-203ENST00000415597 FLIIQ13045 1269 aa13.72□□□□□ -0.21
LMCD1-203ENST00000415597 RSBN1LQ6PCB5 846 aaPredicted RBP13.72□□□□□ -0.21
LMCD1-203ENST00000415597 USP17L1Q7RTZ2 530 aa13.72□□□□□ -0.21
LMCD1-203ENST00000415597 UBE3BQ7Z3V4 1068 aa13.72□□□□□ -0.21
LMCD1-203ENST00000415597 CCDC102AQ96A19 550 aa13.72□□□□□ -0.21
LMCD1-203ENST00000415597 ANKRD2Q9GZV1 360 aa13.72□□□□□ -0.21
LMCD1-203ENST00000415597 GBA2Q9HCG7 927 aaPredicted RBP13.72□□□□□ -0.21
LMCD1-203ENST00000415597 SALL2Q9Y467 1007 aaPredicted RBP13.72□□□□□ -0.21
LMCD1-203ENST00000415597 KCNJ4P48050 445 aa13.71□□□□□ -0.21
LMCD1-203ENST00000415597 MMP14P50281 582 aa13.71□□□□□ -0.21
LMCD1-203ENST00000415597 BRPF1P55201 1214 aaPredicted RBP13.71□□□□□ -0.21
LMCD1-203ENST00000415597 CWF19L2Q2TBE0 894 aaKnown RBP13.71□□□□□ -0.21
LMCD1-203ENST00000415597 CCDC184Q52MB2 194 aa13.71□□□□□ -0.21
LMCD1-203ENST00000415597 LINS1Q8NG48 757 aa13.71□□□□□ -0.21
LMCD1-203ENST00000415597 DNAAF4Q8WXU2 420 aa13.71□□□□□ -0.21
LMCD1-203ENST00000415597 KCNQ5Q9NR82 932 aa13.71□□□□□ -0.21
LMCD1-203ENST00000415597 LEMD3Q9Y2U8 911 aa13.71□□□□□ -0.21
LMCD1-203ENST00000415597 DDX60Q8IY21 1712 aaKnown RBP13.7□□□□□ -0.22
LMCD1-203ENST00000415597 SHTN1A0MZ66 631 aa13.7□□□□□ -0.22
LMCD1-203ENST00000415597 H7C1W4 665 aa13.7□□□□□ -0.22
LMCD1-203ENST00000415597 AOC2O75106 756 aa13.7□□□□□ -0.22
LMCD1-203ENST00000415597 CCT4P50991 539 aaKnown RBP13.7□□□□□ -0.22
LMCD1-203ENST00000415597 GCKRQ14397 625 aa13.7□□□□□ -0.22
LMCD1-203ENST00000415597 RGMBQ6NW40 437 aa13.7□□□□□ -0.22
LMCD1-203ENST00000415597 FBXW7Q969H0 707 aa13.7□□□□□ -0.22
LMCD1-203ENST00000415597 COA1Q9GZY4 146 aa13.7□□□□□ -0.22
LMCD1-203ENST00000415597 GREM2Q9H772 168 aa13.7□□□□□ -0.22
LMCD1-203ENST00000415597 MINPP1Q9UNW1 487 aa13.7□□□□□ -0.22
LMCD1-203ENST00000415597 TAF1P21675 1872 aa13.7□□□□□ -0.22
LMCD1-203ENST00000415597 TRPM7Q96QT4 1865 aa13.7□□□□□ -0.22
LMCD1-203ENST00000415597 MYO3BQ8WXR4 1341 aa13.69□□□□□ -0.22
LMCD1-203ENST00000415597 ANKRD18BA2A2Z9 1011 aa13.69□□□□□ -0.22
LMCD1-203ENST00000415597 GGA3Q9NZ52 723 aa13.69□□□□□ -0.22
LMCD1-203ENST00000415597 HDAC9Q9UKV0 1011 aa13.69□□□□□ -0.22
LMCD1-203ENST00000415597 LRRC37AA6NMS7 1700 aa13.69□□□□□ -0.22
LMCD1-203ENST00000415597 RTL9Q8NET4 1388 aa13.69□□□□□ -0.22
LMCD1-203ENST00000415597 DUOX1Q9NRD9 1551 aa13.68□□□□□ -0.22
LMCD1-203ENST00000415597 ITGA6P23229 1130 aa13.68□□□□□ -0.22
LMCD1-203ENST00000415597 NF2P35240 595 aa13.68□□□□□ -0.22
LMCD1-203ENST00000415597 ZNF157P51786 506 aaPredicted RBP13.68□□□□□ -0.22
LMCD1-203ENST00000415597 ZNF280AP59817 542 aaPredicted RBP13.68□□□□□ -0.22
LMCD1-203ENST00000415597 SCARF1Q14162 830 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms