RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 CACNA1FO60840 1977 aa25.64■■□□□ 1.69
CTTN-205ENST00000415461 ITGBL1O95965 494 aaPredicted RBP25.63■■□□□ 1.69
CTTN-205ENST00000415461 TNIP1Q15025 636 aa25.63■■□□□ 1.69
CTTN-205ENST00000415461 DOK7Q18PE1 504 aa25.63■■□□□ 1.69
CTTN-205ENST00000415461 FAM161AQ3B820 660 aa25.63■■□□□ 1.69
CTTN-205ENST00000415461 ECE2O60344 883 aa25.62■■□□□ 1.69
CTTN-205ENST00000415461 BCL2L13Q9BXK5 485 aa25.62■■□□□ 1.69
CTTN-205ENST00000415461 XDHP47989 1333 aa25.62■■□□□ 1.69
CTTN-205ENST00000415461 USP50Q70EL3 339 aaPredicted RBP25.61■■□□□ 1.69
CTTN-205ENST00000415461 CNTROBQ8N137 903 aa25.61■■□□□ 1.69
CTTN-205ENST00000415461 CREBZFQ9NS37 354 aa25.61■■□□□ 1.69
CTTN-205ENST00000415461 ADARB2Q9NS39 739 aaKnown RBP25.61■■□□□ 1.69
CTTN-205ENST00000415461 MYH3P11055 1940 aa25.61■■□□□ 1.69
CTTN-205ENST00000415461 PSMD14O00487 310 aa25.6■■□□□ 1.69
CTTN-205ENST00000415461 SLFN5Q08AF3 891 aa25.6■■□□□ 1.69
CTTN-205ENST00000415461 CDCA7LQ96GN5 454 aa25.6■■□□□ 1.69
CTTN-205ENST00000415461 ZC3H12CQ9C0D7 883 aaKnown RBP25.6■■□□□ 1.69
CTTN-205ENST00000415461 BSDC1Q9NW68 430 aaPredicted RBP25.6■■□□□ 1.69
CTTN-205ENST00000415461 SHTN1A0MZ66 631 aa25.59■■□□□ 1.69
CTTN-205ENST00000415461 ITGA6P23229 1130 aa25.59■■□□□ 1.69
CTTN-205ENST00000415461 KCNQ5Q9NR82 932 aa25.59■■□□□ 1.69
CTTN-205ENST00000415461 ZBTB12Q9Y330 459 aaPredicted RBP25.59■■□□□ 1.69
CTTN-205ENST00000415461 PCNTO95613 3336 aa25.58■■□□□ 1.69
CTTN-205ENST00000415461 CSF1RP07333 972 aa25.58■■□□□ 1.69
CTTN-205ENST00000415461 SLC4A10Q6U841 1118 aa25.58■■□□□ 1.69
CTTN-205ENST00000415461 JMYQ8N9B5 988 aa25.58■■□□□ 1.69
CTTN-205ENST00000415461 MINPP1Q9UNW1 487 aa25.58■■□□□ 1.69
CTTN-205ENST00000415461 WTIPA6NIX2 430 aaPredicted RBP25.57■■□□□ 1.68
CTTN-205ENST00000415461 IGHMBP2P38935 993 aaKnown RBP25.57■■□□□ 1.68
CTTN-205ENST00000415461 MRPL50Q8N5N7 158 aaKnown RBP25.57■■□□□ 1.68
CTTN-205ENST00000415461 SPEF2Q9C093 1822 aa25.56■■□□□ 1.68
CTTN-205ENST00000415461 ATP2B4P23634 1241 aa25.56■■□□□ 1.68
CTTN-205ENST00000415461 MICALL2Q8IY33 904 aa25.56■■□□□ 1.68
CTTN-205ENST00000415461 TRPM4Q8TD43 1214 aa25.56■■□□□ 1.68
CTTN-205ENST00000415461 CNOT7Q9UIV1 285 aaKnown RBP25.56■■□□□ 1.68
CTTN-205ENST00000415461 MKRN1Q9UHC7 482 aaKnown RBP25.55■■□□□ 1.68
CTTN-205ENST00000415461 TMEM88BA6NKF7 163 aa25.54■■□□□ 1.68
CTTN-205ENST00000415461 G3V3G9 751 aa25.54■■□□□ 1.68
CTTN-205ENST00000415461 GRM8O00222 908 aa25.54■■□□□ 1.68
CTTN-205ENST00000415461 FOXO4P98177 505 aa25.54■■□□□ 1.68
CTTN-205ENST00000415461 DCAF8Q5TAQ9 597 aa25.54■■□□□ 1.68
CTTN-205ENST00000415461 SSH1Q8WYL5 1049 aa25.54■■□□□ 1.68
CTTN-205ENST00000415461 SRCIN1Q9C0H9 1055 aa25.54■■□□□ 1.68
CTTN-205ENST00000415461 ALDH1L1O75891 902 aa25.53■■□□□ 1.68
CTTN-205ENST00000415461 FMR1Q06787 632 aaKnown RBP eCLIP25.53■■□□□ 1.689e-8■■■□□ 15.4
CTTN-205ENST00000415461 EPHA10Q5JZY3 1008 aa25.53■■□□□ 1.68
CTTN-205ENST00000415461 MPHOSPH8Q99549 860 aa25.53■■□□□ 1.68
CTTN-205ENST00000415461 CHMP3Q9Y3E7 222 aa25.53■■□□□ 1.68
CTTN-205ENST00000415461 CCT4P50991 539 aaKnown RBP25.52■■□□□ 1.68
CTTN-205ENST00000415461 HIRAP54198 1017 aaPredicted RBP25.52■■□□□ 1.68
CTTN-205ENST00000415461 DPF2Q92785 391 aa25.52■■□□□ 1.68
CTTN-205ENST00000415461 C9orf78Q9NZ63 289 aaPredicted RBP25.52■■□□□ 1.68
CTTN-205ENST00000415461 SCN9AQ15858 1988 aa25.52■■□□□ 1.68
CTTN-205ENST00000415461 MED23Q9ULK4 1368 aa25.52■■□□□ 1.68
CTTN-205ENST00000415461 ANKRD18BA2A2Z9 1011 aa25.51■■□□□ 1.67
CTTN-205ENST00000415461 H7C1D1 291 aa25.51■■□□□ 1.67
CTTN-205ENST00000415461 TRAF5O00463 557 aa25.51■■□□□ 1.67
CTTN-205ENST00000415461 CNTNAP1P78357 1384 aa25.51■■□□□ 1.67
CTTN-205ENST00000415461 PTPRCP08575 1304 aa25.5■■□□□ 1.67
CTTN-205ENST00000415461 RPS12P25398 132 aaKnown RBP25.5■■□□□ 1.67
CTTN-205ENST00000415461 IFIT5Q13325 482 aaKnown RBP25.5■■□□□ 1.67
CTTN-205ENST00000415461 LMBR1LQ6UX01 489 aa25.5■■□□□ 1.67
CTTN-205ENST00000415461 SAMD7Q7Z3H4 446 aa25.5■■□□□ 1.67
CTTN-205ENST00000415461 TRMT2AQ8IZ69 625 aaKnown RBP25.5■■□□□ 1.67
CTTN-205ENST00000415461 EGFRP00533 1210 aa25.49■■□□□ 1.67
CTTN-205ENST00000415461 VIL1P09327 827 aaKnown RBP25.49■■□□□ 1.67
CTTN-205ENST00000415461 TBC1D10BQ4KMP7 808 aaPredicted RBP25.48■■□□□ 1.67
CTTN-205ENST00000415461 LEMD3Q9Y2U8 911 aa25.48■■□□□ 1.67
CTTN-205ENST00000415461 KLRK1P26718 216 aa25.47■■□□□ 1.67
CTTN-205ENST00000415461 CHRNDQ07001 517 aa25.47■■□□□ 1.67
CTTN-205ENST00000415461 GLIS2Q9BZE0 524 aaPredicted RBP25.47■■□□□ 1.67
CTTN-205ENST00000415461 ANKRD2Q9GZV1 360 aa25.47■■□□□ 1.67
CTTN-205ENST00000415461 PGAP2Q9UHJ9 254 aa25.47■■□□□ 1.67
CTTN-205ENST00000415461 ZNF804BA4D1E1 1349 aa25.46■■□□□ 1.67
CTTN-205ENST00000415461 NBPF7P0C2Y1 421 aaPredicted RBP25.46■■□□□ 1.67
CTTN-205ENST00000415461 ALDH1L2Q3SY69 923 aa25.46■■□□□ 1.67
CTTN-205ENST00000415461 PODNQ7Z5L7 613 aa25.46■■□□□ 1.67
CTTN-205ENST00000415461 TXNRD3Q86VQ6 643 aa25.46■■□□□ 1.67
CTTN-205ENST00000415461 ZC3H15Q8WU90 426 aaKnown RBP25.46■■□□□ 1.67
CTTN-205ENST00000415461 SUCLG2Q96I99 432 aa25.46■■□□□ 1.67
CTTN-205ENST00000415461 SMC4Q9NTJ3 1288 aa25.46■■□□□ 1.67
CTTN-205ENST00000415461 RSBN1LQ6PCB5 846 aaPredicted RBP25.45■■□□□ 1.66
CTTN-205ENST00000415461 KAZALD1Q96I82 304 aa25.45■■□□□ 1.66
CTTN-205ENST00000415461 ZNF594Q96JF6 807 aaPredicted RBP25.45■■□□□ 1.66
CTTN-205ENST00000415461 ABT1Q9ULW3 272 aaKnown RBP25.45■■□□□ 1.66
CTTN-205ENST00000415461 ZNF609O15014 1411 aa25.45■■□□□ 1.66
CTTN-205ENST00000415461 CCDC57Q2TAC2 916 aa25.44■■□□□ 1.66
CTTN-205ENST00000415461 DIEXFQ68CQ4 756 aaKnown RBP25.44■■□□□ 1.66
CTTN-205ENST00000415461 MIER1Q8N108 512 aa25.44■■□□□ 1.66
CTTN-205ENST00000415461 UTYO14607 1347 aa25.43■■□□□ 1.66
CTTN-205ENST00000415461 USP17L3A6NCW0 530 aa25.43■■□□□ 1.66
CTTN-205ENST00000415461 USP17L4A6NCW7 530 aa25.43■■□□□ 1.66
CTTN-205ENST00000415461 SNAP23O00161 211 aa25.43■■□□□ 1.66
CTTN-205ENST00000415461 KCNJ4P48050 445 aa25.43■■□□□ 1.66
CTTN-205ENST00000415461 TAF7LQ5H9L4 462 aa25.43■■□□□ 1.66
CTTN-205ENST00000415461 RBM26Q5T8P6 1007 aaKnown RBP25.43■■□□□ 1.66
CTTN-205ENST00000415461 CST9Q5W186 159 aa25.43■■□□□ 1.66
CTTN-205ENST00000415461 USP17L1Q7RTZ2 530 aa25.43■■□□□ 1.66
CTTN-205ENST00000415461 AGBL3Q8NEM8 1001 aa25.43■■□□□ 1.66
CTTN-205ENST00000415461 HELBQ8NG08 1087 aaPredicted RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms