RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 CCDC8Q9H0W5 538 aaPredicted RBP19.07■□□□□ 0.64
SHMT2-202ENST00000414700 IGHMBP2P38935 993 aaKnown RBP19.06■□□□□ 0.64
SHMT2-202ENST00000414700 TNNI3KQ59H18 835 aa19.06■□□□□ 0.64
SHMT2-202ENST00000414700 HELBQ8NG08 1087 aaPredicted RBP19.06■□□□□ 0.64
SHMT2-202ENST00000414700 BRIP1Q9BX63 1249 aa19.06■□□□□ 0.64
SHMT2-202ENST00000414700 FBXO3Q9UK99 471 aa19.06■□□□□ 0.64
SHMT2-202ENST00000414700 ATF5Q9Y2D1 282 aaPredicted RBP19.06■□□□□ 0.64
SHMT2-202ENST00000414700 FPGT-TNNI3KV9GXZ4 949 aa19.06■□□□□ 0.64
SHMT2-202ENST00000414700 UTRNP46939 3433 aa19.06■□□□□ 0.64
SHMT2-202ENST00000414700 KLRG2A4D1S0 409 aaPredicted RBP19.05■□□□□ 0.64
SHMT2-202ENST00000414700 DDX46Q7L014 1031 aaKnown RBP19.05■□□□□ 0.64
SHMT2-202ENST00000414700 ANKRD18AQ8IVF6 992 aa19.05■□□□□ 0.64
SHMT2-202ENST00000414700 PDE1AP54750 535 aa19.05■□□□□ 0.64
SHMT2-202ENST00000414700 TIMM10P62072 90 aa19.05■□□□□ 0.64
SHMT2-202ENST00000414700 METTL24Q5JXM2 366 aa19.05■□□□□ 0.64
SHMT2-202ENST00000414700 VGLL2Q8N8G2 317 aa19.05■□□□□ 0.64
SHMT2-202ENST00000414700 A0A1B0GUL6 1792 aa19.04■□□□□ 0.64
SHMT2-202ENST00000414700 SNAP23O00161 211 aa19.04■□□□□ 0.64
SHMT2-202ENST00000414700 MX1P20591 662 aa19.04■□□□□ 0.64
SHMT2-202ENST00000414700 RPS8P62241 208 aaKnown RBP19.04■□□□□ 0.64
SHMT2-202ENST00000414700 RPGRQ92834 1020 aaKnown RBP19.04■□□□□ 0.64
SHMT2-202ENST00000414700 BACH2Q9BYV9 841 aa19.04■□□□□ 0.64
SHMT2-202ENST00000414700 CEP126Q9P2H0 1117 aa19.04■□□□□ 0.64
SHMT2-202ENST00000414700 TAF5LO75529 589 aa19.03■□□□□ 0.64
SHMT2-202ENST00000414700 DBNLQ9UJU6 430 aaKnown RBP19.03■□□□□ 0.64
SHMT2-202ENST00000414700 IFIT2P09913 472 aaKnown RBP19.03■□□□□ 0.64
SHMT2-202ENST00000414700 BSDC1Q9NW68 430 aaPredicted RBP19.03■□□□□ 0.64
SHMT2-202ENST00000414700 WTIPA6NIX2 430 aaPredicted RBP19.02■□□□□ 0.64
SHMT2-202ENST00000414700 SRGNP10124 158 aa19.02■□□□□ 0.64
SHMT2-202ENST00000414700 GSPT1P15170 499 aaKnown RBP19.02■□□□□ 0.64
SHMT2-202ENST00000414700 MTFR1LQ9H019 292 aa19.02■□□□□ 0.64
SHMT2-202ENST00000414700 ZNF609O15014 1411 aa19.02■□□□□ 0.64
SHMT2-202ENST00000414700 CACNA1SQ13698 1873 aa19.02■□□□□ 0.64
SHMT2-202ENST00000414700 A0A1B0GUL7 405 aa19.01■□□□□ 0.63
SHMT2-202ENST00000414700 CHRNDQ07001 517 aa19.01■□□□□ 0.63
SHMT2-202ENST00000414700 GRAPQ13588 217 aa19.01■□□□□ 0.63
SHMT2-202ENST00000414700 GRAPLQ8TC17 118 aaPredicted RBP19.01■□□□□ 0.63
SHMT2-202ENST00000414700 DBNDD2Q9BQY9 259 aa19.01■□□□□ 0.63
SHMT2-202ENST00000414700 PDE8BO95263 885 aa19.01■□□□□ 0.63
SHMT2-202ENST00000414700 DDRGK1Q96HY6 314 aa19.01■□□□□ 0.63
SHMT2-202ENST00000414700 NEUROD6Q96NK8 337 aa19.01■□□□□ 0.63
SHMT2-202ENST00000414700 OSBPL3Q9H4L5 887 aa19.01■□□□□ 0.63
SHMT2-202ENST00000414700 MINPP1Q9UNW1 487 aa19.01■□□□□ 0.63
SHMT2-202ENST00000414700 MROH5Q6ZUA9 1318 aa19.01■□□□□ 0.63
SHMT2-202ENST00000414700 HOXA10P31260 410 aaPredicted RBP19■□□□□ 0.63
SHMT2-202ENST00000414700 PDE6BP35913 854 aa19■□□□□ 0.63
SHMT2-202ENST00000414700 STAP2Q9UGK3 403 aa19■□□□□ 0.63
SHMT2-202ENST00000414700 CHRNA5P30532 468 aa19■□□□□ 0.63
SHMT2-202ENST00000414700 ADORA1P30542 326 aa19■□□□□ 0.63
SHMT2-202ENST00000414700 GSE1Q14687 1217 aa19■□□□□ 0.63
SHMT2-202ENST00000414700 PI4K2BQ8TCG2 481 aa19■□□□□ 0.63
SHMT2-202ENST00000414700 GPR108Q9NPR9 543 aa19■□□□□ 0.63
SHMT2-202ENST00000414700 TTC22Q5TAA0 569 aa18.99■□□□□ 0.63
SHMT2-202ENST00000414700 RBM17Q96I25 401 aaKnown RBP18.99■□□□□ 0.63
SHMT2-202ENST00000414700 C10orf71Q711Q0 1435 aa18.99■□□□□ 0.63
SHMT2-202ENST00000414700 ATP2B3Q16720 1220 aa18.98■□□□□ 0.63
SHMT2-202ENST00000414700 BRPF3Q9ULD4 1205 aa18.98■□□□□ 0.63
SHMT2-202ENST00000414700 C2CD5Q86YS7 1000 aa18.98■□□□□ 0.63
SHMT2-202ENST00000414700 NPR1P16066 1061 aa18.97■□□□□ 0.63
SHMT2-202ENST00000414700 CRAMP1Q96RY5 1269 aa18.97■□□□□ 0.63
SHMT2-202ENST00000414700 SGIP1Q9BQI5 828 aa18.97■□□□□ 0.63
SHMT2-202ENST00000414700 ECHDC1Q9NTX5 307 aa18.97■□□□□ 0.63
SHMT2-202ENST00000414700 AKAP2Q9Y2D5 859 aa18.97■□□□□ 0.63
SHMT2-202ENST00000414700 FGFR2P21802 821 aa18.96■□□□□ 0.63
SHMT2-202ENST00000414700 BMP2KLQ5H9B9 411 aa18.96■□□□□ 0.63
SHMT2-202ENST00000414700 XAGE2Q96GT9 111 aa18.96■□□□□ 0.63
SHMT2-202ENST00000414700 KIF13BQ9NQT8 1826 aa18.96■□□□□ 0.63
SHMT2-202ENST00000414700 MAP4K4O95819 1239 aaPredicted RBP18.96■□□□□ 0.63
SHMT2-202ENST00000414700 PUM3Q15397 648 aaKnown RBP18.96■□□□□ 0.63
SHMT2-202ENST00000414700 ZNF622Q969S3 477 aaKnown RBP eCLIP18.96■□□□□ 0.63
SHMT2-202ENST00000414700 MASTLQ96GX5 879 aa18.96■□□□□ 0.63
SHMT2-202ENST00000414700 TTC41PQ6P2S7 1318 aa18.96■□□□□ 0.63
SHMT2-202ENST00000414700 H0YIN7 160 aa18.95■□□□□ 0.62
SHMT2-202ENST00000414700 PTGER2P43116 358 aa18.95■□□□□ 0.62
SHMT2-202ENST00000414700 OLFM4Q6UX06 510 aa18.95■□□□□ 0.62
SHMT2-202ENST00000414700 SLX4Q8IY92 1834 aa18.95■□□□□ 0.62
SHMT2-202ENST00000414700 SDSP20132 328 aa18.95■□□□□ 0.62
SHMT2-202ENST00000414700 POLD1P28340 1107 aa18.95■□□□□ 0.62
SHMT2-202ENST00000414700 ARAP2Q8WZ64 1704 aa18.95■□□□□ 0.62
SHMT2-202ENST00000414700 NDUFB9Q9Y6M9 179 aa18.95■□□□□ 0.62
SHMT2-202ENST00000414700 AOX1Q06278 1338 aa18.94■□□□□ 0.62
SHMT2-202ENST00000414700 C8orf34Q49A92 452 aa18.94■□□□□ 0.62
SHMT2-202ENST00000414700 BOLA2Q9H3K6 86 aa18.94■□□□□ 0.62
SHMT2-202ENST00000414700 BBOX1O75936 387 aa18.93■□□□□ 0.62
SHMT2-202ENST00000414700 LPIN2Q92539 896 aa18.93■□□□□ 0.62
SHMT2-202ENST00000414700 GPATCH3Q96I76 525 aa18.93■□□□□ 0.62
SHMT2-202ENST00000414700 LRRC37AA6NMS7 1700 aa18.93■□□□□ 0.62
SHMT2-202ENST00000414700 AK9Q5TCS8 1911 aa18.93■□□□□ 0.62
SHMT2-202ENST00000414700 PPEF1O14829 653 aaPredicted RBP18.93■□□□□ 0.62
SHMT2-202ENST00000414700 KLRK1P26718 216 aa18.93■□□□□ 0.62
SHMT2-202ENST00000414700 DLEC1Q9Y238 1755 aa18.92■□□□□ 0.62
SHMT2-202ENST00000414700 A0A0G2JLW4 131 aa18.92■□□□□ 0.62
SHMT2-202ENST00000414700 GLRX3O76003 335 aaKnown RBP18.92■□□□□ 0.62
SHMT2-202ENST00000414700 KIAA1551Q9HCM1 1747 aa18.92■□□□□ 0.62
SHMT2-202ENST00000414700 ALDH1B1P30837 517 aa18.91■□□□□ 0.62
SHMT2-202ENST00000414700 GPSM2P81274 684 aa18.91■□□□□ 0.62
SHMT2-202ENST00000414700 EDC3Q96F86 508 aaKnown RBP18.91■□□□□ 0.62
SHMT2-202ENST00000414700 ANKIB1Q9P2G1 1089 aa18.91■□□□□ 0.62
SHMT2-202ENST00000414700 TRIM6-TRIM34B2RNG4 842 aa18.91■□□□□ 0.62
SHMT2-202ENST00000414700 ERC2O15083 957 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms