RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 NACC1Q96RE7 527 aa10.36□□□□□ -0.75
ATG4C-204ENST00000414558 SMG9Q9H0W8 520 aaKnown RBP10.36□□□□□ -0.75
ATG4C-204ENST00000414558 ABI2Q9NYB9 513 aaPredicted RBP10.36□□□□□ -0.75
ATG4C-204ENST00000414558 A0A0A0MRY4 1105 aa10.35□□□□□ -0.75
ATG4C-204ENST00000414558 J3QW42 95 aa10.35□□□□□ -0.75
ATG4C-204ENST00000414558 MZF1P28698 734 aaPredicted RBP10.35□□□□□ -0.75
ATG4C-204ENST00000414558 GRIK5Q16478 980 aa10.35□□□□□ -0.75
ATG4C-204ENST00000414558 MSL1Q68DK7 614 aa10.35□□□□□ -0.75
ATG4C-204ENST00000414558 PLD4Q96BZ4 506 aa10.35□□□□□ -0.75
ATG4C-204ENST00000414558 ABL1P00519 1130 aa10.34□□□□□ -0.75
ATG4C-204ENST00000414558 PDGFAP04085 211 aa10.34□□□□□ -0.75
ATG4C-204ENST00000414558 FKBP4Q02790 459 aaKnown RBP eCLIP10.34□□□□□ -0.75
ATG4C-204ENST00000414558 HYAL2Q12891 473 aa10.34□□□□□ -0.75
ATG4C-204ENST00000414558 ZNF438Q7Z4V0 828 aa10.34□□□□□ -0.75
ATG4C-204ENST00000414558 RETREG2Q8NC44 543 aa10.34□□□□□ -0.75
ATG4C-204ENST00000414558 ELP3Q9H9T3 547 aa10.34□□□□□ -0.75
ATG4C-204ENST00000414558 ELNP15502 786 aa10.33□□□□□ -0.76
ATG4C-204ENST00000414558 AAMPQ13685 434 aa10.33□□□□□ -0.76
ATG4C-204ENST00000414558 WFDC8Q8IUA0 241 aa10.33□□□□□ -0.76
ATG4C-204ENST00000414558 DMRTC2Q8IXT2 367 aaPredicted RBP10.33□□□□□ -0.76
ATG4C-204ENST00000414558 SPACA7Q96KW9 195 aa10.33□□□□□ -0.76
ATG4C-204ENST00000414558 XKR5Q6UX68 686 aa10.32□□□□□ -0.76
ATG4C-204ENST00000414558 DTWD1Q8N5C7 304 aa10.32□□□□□ -0.76
ATG4C-204ENST00000414558 EGFL7Q9UHF1 273 aa10.32□□□□□ -0.76
ATG4C-204ENST00000414558 ZNF211Q13398 564 aaPredicted RBP10.31□□□□□ -0.76
ATG4C-204ENST00000414558 ILDR2Q71H61 639 aa10.31□□□□□ -0.76
ATG4C-204ENST00000414558 FMR1NBQ8N0W7 255 aaPredicted RBP10.31□□□□□ -0.76
ATG4C-204ENST00000414558 TMEM63CQ9P1W3 806 aa10.31□□□□□ -0.76
ATG4C-204ENST00000414558 USP5P45974 858 aa10.3□□□□□ -0.76
ATG4C-204ENST00000414558 GRIK4Q16099 956 aa10.3□□□□□ -0.76
ATG4C-204ENST00000414558 C8orf34Q49A92 452 aa10.3□□□□□ -0.76
ATG4C-204ENST00000414558 ANO2Q9NQ90 1003 aa10.3□□□□□ -0.76
ATG4C-204ENST00000414558 POLIQ9UNA4 740 aa10.3□□□□□ -0.76
ATG4C-204ENST00000414558 BAG6P46379 1132 aa10.29□□□□□ -0.76
ATG4C-204ENST00000414558 CACTIN-AS1Q8N1I8 211 aa10.29□□□□□ -0.76
ATG4C-204ENST00000414558 GGNBP2Q9H3C7 697 aa10.29□□□□□ -0.76
ATG4C-204ENST00000414558 KIF4AO95239 1232 aa10.28□□□□□ -0.76
ATG4C-204ENST00000414558 GATA4P43694 442 aa10.28□□□□□ -0.76
ATG4C-204ENST00000414558 EHHADHQ08426 723 aa10.28□□□□□ -0.76
ATG4C-204ENST00000414558 COL13A1Q5TAT6 717 aaPredicted RBP10.28□□□□□ -0.76
ATG4C-204ENST00000414558 GDF6Q6KF10 455 aaPredicted RBP10.28□□□□□ -0.76
ATG4C-204ENST00000414558 C9orf172C9J069 976 aa10.27□□□□□ -0.77
ATG4C-204ENST00000414558 ICMTO60725 284 aa10.27□□□□□ -0.77
ATG4C-204ENST00000414558 CYP2E1P05181 493 aaPredicted RBP10.27□□□□□ -0.77
ATG4C-204ENST00000414558 NCAPG2Q86XI2 1143 aa10.27□□□□□ -0.77
ATG4C-204ENST00000414558 SMNDC1O75940 238 aaKnown RBP eCLIP10.26□□□□□ -0.77
ATG4C-204ENST00000414558 SERPINB4P48594 390 aa10.26□□□□□ -0.77
ATG4C-204ENST00000414558 FBXO11Q86XK2 927 aa10.26□□□□□ -0.77
ATG4C-204ENST00000414558 PMEPA1Q969W9 287 aa10.26□□□□□ -0.77
ATG4C-204ENST00000414558 A6NHS1 94 aa10.25□□□□□ -0.77
ATG4C-204ENST00000414558 H3BRB1 525 aa10.25□□□□□ -0.77
ATG4C-204ENST00000414558 FZD6O60353 706 aa10.25□□□□□ -0.77
ATG4C-204ENST00000414558 SELPP16109 830 aa10.25□□□□□ -0.77
ATG4C-204ENST00000414558 CES1P23141 567 aa10.25□□□□□ -0.77
ATG4C-204ENST00000414558 NRG1Q02297 640 aaPredicted RBP10.25□□□□□ -0.77
ATG4C-204ENST00000414558 GLYCTKQ8IVS8 523 aa10.25□□□□□ -0.77
ATG4C-204ENST00000414558 IL22RA1Q8N6P7 574 aa10.25□□□□□ -0.77
ATG4C-204ENST00000414558 LENG1Q96BZ8 264 aaPredicted RBP10.25□□□□□ -0.77
ATG4C-204ENST00000414558 TUT1Q9H6E5 874 aaKnown RBP10.25□□□□□ -0.77
ATG4C-204ENST00000414558 CNTN3Q9P232 1028 aa10.25□□□□□ -0.77
ATG4C-204ENST00000414558 TRIM33Q9UPN9 1127 aa10.25□□□□□ -0.77
ATG4C-204ENST00000414558 ATP11AP98196 1134 aa10.24□□□□□ -0.77
ATG4C-204ENST00000414558 CEP135Q66GS9 1140 aa10.24□□□□□ -0.77
ATG4C-204ENST00000414558 C1orf127Q8N9H9 656 aa10.24□□□□□ -0.77
ATG4C-204ENST00000414558 MUC3BQ9H195 1237 aa10.24□□□□□ -0.77
ATG4C-204ENST00000414558 SRA1Q9HD15 236 aaKnown RBP10.24□□□□□ -0.77
ATG4C-204ENST00000414558 KANSL3Q9P2N6 904 aa10.24□□□□□ -0.77
ATG4C-204ENST00000414558 TXNDC2Q86VQ3 553 aa10.23□□□□□ -0.77
ATG4C-204ENST00000414558 MAP4K3Q8IVH8 894 aa10.23□□□□□ -0.77
ATG4C-204ENST00000414558 GJD3Q8N144 294 aa10.23□□□□□ -0.77
ATG4C-204ENST00000414558 CEP120Q8N960 986 aa10.23□□□□□ -0.77
ATG4C-204ENST00000414558 DCAF11Q8TEB1 546 aa10.23□□□□□ -0.77
ATG4C-204ENST00000414558 SNX29Q8TEQ0 813 aa10.23□□□□□ -0.77
ATG4C-204ENST00000414558 PBX4Q9BYU1 374 aa10.23□□□□□ -0.77
ATG4C-204ENST00000414558 RASSF4Q9H2L5 321 aa10.23□□□□□ -0.77
ATG4C-204ENST00000414558 ADGRE1Q14246 886 aa10.22□□□□□ -0.77
ATG4C-204ENST00000414558 SHISA2Q6UWI4 295 aa10.22□□□□□ -0.77
ATG4C-204ENST00000414558 CCER1Q8TC90 406 aaPredicted RBP10.22□□□□□ -0.77
ATG4C-204ENST00000414558 CCDC87Q9NVE4 849 aa10.22□□□□□ -0.77
ATG4C-204ENST00000414558 SALL4Q9UJQ4 1053 aa10.22□□□□□ -0.77
ATG4C-204ENST00000414558 USP21Q9UK80 565 aa10.22□□□□□ -0.77
ATG4C-204ENST00000414558 PHACTR2O75167 634 aa10.21□□□□□ -0.77
ATG4C-204ENST00000414558 TNFRSF21O75509 655 aa10.21□□□□□ -0.77
ATG4C-204ENST00000414558 MBTPS1Q14703 1052 aa10.21□□□□□ -0.77
ATG4C-204ENST00000414558 CHRDQ9H2X0 955 aa10.21□□□□□ -0.77
ATG4C-204ENST00000414558 BRPF3Q9ULD4 1205 aa10.21□□□□□ -0.77
ATG4C-204ENST00000414558 PPME1Q9Y570 386 aa10.21□□□□□ -0.77
ATG4C-204ENST00000414558 DEAF1O75398 565 aaPredicted RBP10.2□□□□□ -0.78
ATG4C-204ENST00000414558 IGF2-ASQ6U949 168 aa10.2□□□□□ -0.78
ATG4C-204ENST00000414558 LACRTQ9GZZ8 138 aa10.2□□□□□ -0.78
ATG4C-204ENST00000414558 FAM177BA6PVY3 158 aa10.19□□□□□ -0.78
ATG4C-204ENST00000414558 K7ELQ4 463 aaPredicted RBP10.19□□□□□ -0.78
ATG4C-204ENST00000414558 CDC27P30260 824 aa10.19□□□□□ -0.78
ATG4C-204ENST00000414558 DOC2BQ14184 412 aa10.19□□□□□ -0.78
ATG4C-204ENST00000414558 SUZ12Q15022 739 aaKnown RBP10.19□□□□□ -0.78
ATG4C-204ENST00000414558 TXNRD3Q86VQ6 643 aa10.19□□□□□ -0.78
ATG4C-204ENST00000414558 DLL1O00548 723 aa10.18□□□□□ -0.78
ATG4C-204ENST00000414558 NDUFB5O43674 189 aa10.18□□□□□ -0.78
ATG4C-204ENST00000414558 ADAM23O75077 832 aa10.18□□□□□ -0.78
ATG4C-204ENST00000414558 FURINP09958 794 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms