RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 DLK2Q6UY11 383 aa24.75■■□□□ 1.55
CPSF7-204ENST00000413232 SAMD7Q7Z3H4 446 aa24.75■■□□□ 1.55
CPSF7-204ENST00000413232 PODXL2Q9NZ53 605 aa24.75■■□□□ 1.55
CPSF7-204ENST00000413232 TLL2Q9Y6L7 1015 aa24.75■■□□□ 1.55
CPSF7-204ENST00000413232 TWISTNBQ3B726 338 aaPredicted RBP24.74■■□□□ 1.55
CPSF7-204ENST00000413232 CCDC152Q4G0S7 254 aa24.74■■□□□ 1.55
CPSF7-204ENST00000413232 DPF2Q92785 391 aa24.74■■□□□ 1.55
CPSF7-204ENST00000413232 CAPNS2Q96L46 248 aa24.74■■□□□ 1.55
CPSF7-204ENST00000413232 THSD7BQ9C0I4 1608 aa24.74■■□□□ 1.55
CPSF7-204ENST00000413232 CACNA1FO60840 1977 aa24.74■■□□□ 1.55
CPSF7-204ENST00000413232 PSME4Q14997 1843 aa24.73■■□□□ 1.55
CPSF7-204ENST00000413232 WTIPA6NIX2 430 aaPredicted RBP24.73■■□□□ 1.55
CPSF7-204ENST00000413232 H7C1D1 291 aa24.73■■□□□ 1.55
CPSF7-204ENST00000413232 CELF2O95319 508 aaKnown RBP24.73■■□□□ 1.55
CPSF7-204ENST00000413232 CWF19L2Q2TBE0 894 aaKnown RBP24.73■■□□□ 1.55
CPSF7-204ENST00000413232 ZC3H15Q8WU90 426 aaKnown RBP24.73■■□□□ 1.55
CPSF7-204ENST00000413232 EYA3Q99504 573 aa24.73■■□□□ 1.55
CPSF7-204ENST00000413232 UFL1O94874 794 aa24.72■■□□□ 1.55
CPSF7-204ENST00000413232 CTCFP49711 727 aaPredicted RBP24.72■■□□□ 1.55
CPSF7-204ENST00000413232 AIDAQ96BJ3 306 aa24.72■■□□□ 1.55
CPSF7-204ENST00000413232 MRS2Q9HD23 443 aa24.72■■□□□ 1.55
CPSF7-204ENST00000413232 ANKIB1Q9P2G1 1089 aa24.72■■□□□ 1.55
CPSF7-204ENST00000413232 HSP90B1P14625 803 aaKnown RBP24.71■■□□□ 1.55
CPSF7-204ENST00000413232 LBX1P52954 281 aa24.71■■□□□ 1.55
CPSF7-204ENST00000413232 GRM1Q13255 1194 aa24.71■■□□□ 1.55
CPSF7-204ENST00000413232 TBC1D10BQ4KMP7 808 aaPredicted RBP24.71■■□□□ 1.55
CPSF7-204ENST00000413232 PAXIP1Q6ZW49 1069 aaPredicted RBP24.71■■□□□ 1.55
CPSF7-204ENST00000413232 SAPCD2Q86UD0 394 aa24.71■■□□□ 1.55
CPSF7-204ENST00000413232 CHMP4AQ9BY43 222 aa24.71■■□□□ 1.55
CPSF7-204ENST00000413232 ZC3H12CQ9C0D7 883 aaKnown RBP24.71■■□□□ 1.55
CPSF7-204ENST00000413232 PRDM10Q9NQV6 1147 aa24.71■■□□□ 1.55
CPSF7-204ENST00000413232 IL16Q14005 1332 aa24.7■■□□□ 1.54
CPSF7-204ENST00000413232 SLC4A2P04920 1241 aa24.7■■□□□ 1.54
CPSF7-204ENST00000413232 TTLL11Q8NHH1 800 aa24.7■■□□□ 1.54
CPSF7-204ENST00000413232 STK31Q9BXU1 1019 aa24.7■■□□□ 1.54
CPSF7-204ENST00000413232 GGA1Q9UJY5 639 aa24.7■■□□□ 1.54
CPSF7-204ENST00000413232 SALL2Q9Y467 1007 aaPredicted RBP24.7■■□□□ 1.54
CPSF7-204ENST00000413232 NEURL1BA8MQ27 555 aa24.69■■□□□ 1.54
CPSF7-204ENST00000413232 VIL1P09327 827 aaKnown RBP24.69■■□□□ 1.54
CPSF7-204ENST00000413232 HSPA8P11142 646 aaKnown RBP24.69■■□□□ 1.54
CPSF7-204ENST00000413232 CTSWP56202 376 aa24.69■■□□□ 1.54
CPSF7-204ENST00000413232 CDC37L1Q7L3B6 337 aa24.69■■□□□ 1.54
CPSF7-204ENST00000413232 USP48Q86UV5 1035 aa24.69■■□□□ 1.54
CPSF7-204ENST00000413232 ZNF408Q9H9D4 720 aa24.69■■□□□ 1.54
CPSF7-204ENST00000413232 FANCIQ9NVI1 1328 aa24.68■■□□□ 1.54
CPSF7-204ENST00000413232 AOC2O75106 756 aa24.68■■□□□ 1.54
CPSF7-204ENST00000413232 RBM26Q5T8P6 1007 aaKnown RBP24.68■■□□□ 1.54
CPSF7-204ENST00000413232 ANKRD18AQ8IVF6 992 aa24.68■■□□□ 1.54
CPSF7-204ENST00000413232 GREM2Q9H772 168 aa24.68■■□□□ 1.54
CPSF7-204ENST00000413232 RPS12P25398 132 aaKnown RBP24.67■■□□□ 1.54
CPSF7-204ENST00000413232 ECE1P42892 770 aa24.67■■□□□ 1.54
CPSF7-204ENST00000413232 MAP2K1Q02750 393 aaPredicted RBP24.67■■□□□ 1.54
CPSF7-204ENST00000413232 H7C1W4 665 aa24.66■■□□□ 1.54
CPSF7-204ENST00000413232 NCBP3Q53F19 620 aaKnown RBP24.66■■□□□ 1.54
CPSF7-204ENST00000413232 XDHP47989 1333 aa24.65■■□□□ 1.54
CPSF7-204ENST00000413232 ZNF316A6NFI3 1004 aaPredicted RBP24.65■■□□□ 1.54
CPSF7-204ENST00000413232 NEXNQ0ZGT2 675 aa24.65■■□□□ 1.54
CPSF7-204ENST00000413232 FLIIQ13045 1269 aa24.65■■□□□ 1.54
CPSF7-204ENST00000413232 UBE3BQ7Z3V4 1068 aa24.65■■□□□ 1.54
CPSF7-204ENST00000413232 SPINK5Q9NQ38 1064 aaPredicted RBP24.65■■□□□ 1.54
CPSF7-204ENST00000413232 ZNF646O15015 1829 aaPredicted RBP24.65■■□□□ 1.54
CPSF7-204ENST00000413232 ASTN2O75129 1339 aaPredicted RBP24.64■■□□□ 1.54
CPSF7-204ENST00000413232 VAMP4O75379 141 aa24.64■■□□□ 1.54
CPSF7-204ENST00000413232 MINPP1Q9UNW1 487 aa24.64■■□□□ 1.54
CPSF7-204ENST00000413232 ANP32CO43423 234 aa24.63■■□□□ 1.53
CPSF7-204ENST00000413232 CASP7P55210 303 aa24.63■■□□□ 1.53
CPSF7-204ENST00000413232 CDC5LQ99459 802 aaKnown RBP24.63■■□□□ 1.53
CPSF7-204ENST00000413232 ADM5C9JUS6 153 aa24.62■■□□□ 1.53
CPSF7-204ENST00000413232 G3V3G9 751 aa24.62■■□□□ 1.53
CPSF7-204ENST00000413232 ATP2B4P23634 1241 aa24.62■■□□□ 1.53
CPSF7-204ENST00000413232 EXOSC9Q06265 439 aaKnown RBP24.62■■□□□ 1.53
CPSF7-204ENST00000413232 GCKRQ14397 625 aa24.62■■□□□ 1.53
CPSF7-204ENST00000413232 KIF4BQ2VIQ3 1234 aa24.62■■□□□ 1.53
CPSF7-204ENST00000413232 DCAF8Q5TAQ9 597 aa24.62■■□□□ 1.53
CPSF7-204ENST00000413232 KRT26Q7Z3Y9 468 aa24.62■■□□□ 1.53
CPSF7-204ENST00000413232 HHIPL1Q96JK4 782 aa24.62■■□□□ 1.53
CPSF7-204ENST00000413232 BSDC1Q9NW68 430 aaPredicted RBP24.62■■□□□ 1.53
CPSF7-204ENST00000413232 ZEB1P37275 1124 aaPredicted RBP24.61■■□□□ 1.53
CPSF7-204ENST00000413232 RSBN1LQ6PCB5 846 aaPredicted RBP24.61■■□□□ 1.53
CPSF7-204ENST00000413232 WDR63Q8IWG1 891 aa24.61■■□□□ 1.53
CPSF7-204ENST00000413232 ZIC5Q96T25 663 aa24.61■■□□□ 1.53
CPSF7-204ENST00000413232 GMLQ99445 158 aa24.61■■□□□ 1.53
CPSF7-204ENST00000413232 CASP8AP2Q9UKL3 1982 aa24.6■■□□□ 1.53
CPSF7-204ENST00000413232 MAP2K2P36507 400 aa24.6■■□□□ 1.53
CPSF7-204ENST00000413232 FKBP5Q13451 457 aaPredicted RBP24.6■■□□□ 1.53
CPSF7-204ENST00000413232 DNAAF4Q8WXU2 420 aa24.6■■□□□ 1.53
CPSF7-204ENST00000413232 TSKSQ9UJT2 592 aa24.6■■□□□ 1.53
CPSF7-204ENST00000413232 ZNF280AP59817 542 aaPredicted RBP24.59■■□□□ 1.53
CPSF7-204ENST00000413232 TXNRD3Q86VQ6 643 aa24.59■■□□□ 1.53
CPSF7-204ENST00000413232 PLA2G12BQ9BX93 195 aa24.59■■□□□ 1.53
CPSF7-204ENST00000413232 ZNF609O15014 1411 aa24.59■■□□□ 1.53
CPSF7-204ENST00000413232 AGBL3Q8NEM8 1001 aa24.58■■□□□ 1.53
CPSF7-204ENST00000413232 DCPSQ96C86 337 aaKnown RBP24.58■■□□□ 1.53
CPSF7-204ENST00000413232 GGA3Q9NZ52 723 aa24.58■■□□□ 1.53
CPSF7-204ENST00000413232 CCT4P50991 539 aaKnown RBP24.57■■□□□ 1.52
CPSF7-204ENST00000413232 HUNKP57058 714 aa24.57■■□□□ 1.52
CPSF7-204ENST00000413232 FAM161AQ3B820 660 aa24.57■■□□□ 1.52
CPSF7-204ENST00000413232 PODNQ7Z5L7 613 aa24.57■■□□□ 1.52
CPSF7-204ENST00000413232 LINS1Q8NG48 757 aa24.57■■□□□ 1.52
CPSF7-204ENST00000413232 MXD3Q9BW11 206 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms