RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 CXCL9Q07325 125 aa22.08■■□□□ 1.13
HSPG2-204ENST00000412328 CDC5LQ99459 802 aaKnown RBP22.08■■□□□ 1.13
HSPG2-204ENST00000412328 SRCIN1Q9C0H9 1055 aa22.08■■□□□ 1.13
HSPG2-204ENST00000412328 ITGA6P23229 1130 aa22.07■■□□□ 1.12
HSPG2-204ENST00000412328 BSDC1Q9NW68 430 aaPredicted RBP22.07■■□□□ 1.12
HSPG2-204ENST00000412328 XDHP47989 1333 aa22.06■■□□□ 1.12
HSPG2-204ENST00000412328 SLC4A10Q6U841 1118 aa22.06■■□□□ 1.12
HSPG2-204ENST00000412328 SMC4Q9NTJ3 1288 aa22.06■■□□□ 1.12
HSPG2-204ENST00000412328 HACL1Q9UJ83 578 aa22.06■■□□□ 1.12
HSPG2-204ENST00000412328 MINPP1Q9UNW1 487 aa22.06■■□□□ 1.12
HSPG2-204ENST00000412328 POLR2AP24928 1970 aaKnown RBP22.05■■□□□ 1.12
HSPG2-204ENST00000412328 MED23Q9ULK4 1368 aa22.05■■□□□ 1.12
HSPG2-204ENST00000412328 WTIPA6NIX2 430 aaPredicted RBP22.05■■□□□ 1.12
HSPG2-204ENST00000412328 NBPF7P0C2Y1 421 aaPredicted RBP22.05■■□□□ 1.12
HSPG2-204ENST00000412328 WASHC4Q2M389 1173 aa22.05■■□□□ 1.12
HSPG2-204ENST00000412328 UFL1O94874 794 aa22.04■■□□□ 1.12
HSPG2-204ENST00000412328 EPHX2P34913 555 aa22.04■■□□□ 1.12
HSPG2-204ENST00000412328 RARSP54136 660 aaKnown RBP22.04■■□□□ 1.12
HSPG2-204ENST00000412328 SUCLG2Q96I99 432 aa22.04■■□□□ 1.12
HSPG2-204ENST00000412328 DBNDD1Q9H9R9 158 aa22.04■■□□□ 1.12
HSPG2-204ENST00000412328 GJA3Q9Y6H8 435 aa22.04■■□□□ 1.12
HSPG2-204ENST00000412328 IRS2Q9Y4H2 1338 aa22.04■■□□□ 1.12
HSPG2-204ENST00000412328 C6orf229H3BNL8 230 aa22.03■■□□□ 1.12
HSPG2-204ENST00000412328 HNRNPUQ00839 825 aaKnown RBP eCLIP22.03■■□□□ 1.12
HSPG2-204ENST00000412328 GGA1Q9UJY5 639 aa22.03■■□□□ 1.12
HSPG2-204ENST00000412328 ZBED9Q6R2W3 1325 aa22.03■■□□□ 1.12
HSPG2-204ENST00000412328 ECM29Q5VYK3 1845 aa22.02■■□□□ 1.12
HSPG2-204ENST00000412328 ECE2O60344 883 aa22.02■■□□□ 1.12
HSPG2-204ENST00000412328 EPS15P42566 896 aa22.02■■□□□ 1.12
HSPG2-204ENST00000412328 RABL6Q3YEC7 729 aaPredicted RBP22.02■■□□□ 1.12
HSPG2-204ENST00000412328 CHADLQ6NUI6 762 aa22.02■■□□□ 1.12
HSPG2-204ENST00000412328 LDHDQ86WU2 507 aa22.02■■□□□ 1.12
HSPG2-204ENST00000412328 EYA3Q99504 573 aa22.02■■□□□ 1.12
HSPG2-204ENST00000412328 MYH13Q9UKX3 1938 aa22.02■■□□□ 1.11
HSPG2-204ENST00000412328 RIMBP2O15034 1052 aa22.01■■□□□ 1.11
HSPG2-204ENST00000412328 RAD17O75943 681 aa22.01■■□□□ 1.11
HSPG2-204ENST00000412328 APLP1P51693 650 aa22.01■■□□□ 1.11
HSPG2-204ENST00000412328 CIAPIN1Q6FI81 312 aa22.01■■□□□ 1.11
HSPG2-204ENST00000412328 LMBR1LQ6UX01 489 aa22.01■■□□□ 1.11
HSPG2-204ENST00000412328 ANKRD44Q8N8A2 993 aa22.01■■□□□ 1.11
HSPG2-204ENST00000412328 GPRC5DQ9NZD1 345 aa22.01■■□□□ 1.11
HSPG2-204ENST00000412328 ANKIB1Q9P2G1 1089 aa22.01■■□□□ 1.11
HSPG2-204ENST00000412328 PASKQ96RG2 1323 aa22.01■■□□□ 1.11
HSPG2-204ENST00000412328 ATP2B4P23634 1241 aa22■■□□□ 1.11
HSPG2-204ENST00000412328 GMPSP49915 693 aaPredicted RBP22■■□□□ 1.11
HSPG2-204ENST00000412328 USP44Q9H0E7 712 aa22■■□□□ 1.11
HSPG2-204ENST00000412328 KCNQ5Q9NR82 932 aa22■■□□□ 1.11
HSPG2-204ENST00000412328 C9orf78Q9NZ63 289 aaPredicted RBP22■■□□□ 1.11
HSPG2-204ENST00000412328 IGHMBP2P38935 993 aaKnown RBP21.99■■□□□ 1.11
HSPG2-204ENST00000412328 CCT4P50991 539 aaKnown RBP21.99■■□□□ 1.11
HSPG2-204ENST00000412328 DOK7Q18PE1 504 aa21.99■■□□□ 1.11
HSPG2-204ENST00000412328 NOB1Q9ULX3 412 aaKnown RBP21.99■■□□□ 1.11
HSPG2-204ENST00000412328 SHTN1A0MZ66 631 aa21.98■■□□□ 1.11
HSPG2-204ENST00000412328 ANKRD18BA2A2Z9 1011 aa21.98■■□□□ 1.11
HSPG2-204ENST00000412328 PSMD14O00487 310 aa21.98■■□□□ 1.11
HSPG2-204ENST00000412328 KLRK1P26718 216 aa21.98■■□□□ 1.11
HSPG2-204ENST00000412328 HTRA3P83110 453 aa21.98■■□□□ 1.11
HSPG2-204ENST00000412328 BICC1Q9H694 974 aaKnown RBP21.98■■□□□ 1.11
HSPG2-204ENST00000412328 KIF16BQ96L93 1317 aa21.98■■□□□ 1.11
HSPG2-204ENST00000412328 ITGBL1O95965 494 aaPredicted RBP21.97■■□□□ 1.11
HSPG2-204ENST00000412328 CHRNDQ07001 517 aa21.97■■□□□ 1.11
HSPG2-204ENST00000412328 IFIT5Q13325 482 aaKnown RBP21.97■■□□□ 1.11
HSPG2-204ENST00000412328 PNMA8AQ86V59 439 aaPredicted RBP21.97■■□□□ 1.11
HSPG2-204ENST00000412328 TXNRD3Q86VQ6 643 aa21.97■■□□□ 1.11
HSPG2-204ENST00000412328 DNAJC5GQ8N7S2 189 aa21.97■■□□□ 1.11
HSPG2-204ENST00000412328 THSD7BQ9C0I4 1608 aa21.97■■□□□ 1.11
HSPG2-204ENST00000412328 TNIP1Q15025 636 aa21.96■■□□□ 1.11
HSPG2-204ENST00000412328 EAPPQ56P03 285 aaPredicted RBP21.96■■□□□ 1.11
HSPG2-204ENST00000412328 ZNF594Q96JF6 807 aaPredicted RBP21.96■■□□□ 1.11
HSPG2-204ENST00000412328 ZC3H12CQ9C0D7 883 aaKnown RBP21.96■■□□□ 1.11
HSPG2-204ENST00000412328 LMOD1P29536 600 aaPredicted RBP21.95■■□□□ 1.1
HSPG2-204ENST00000412328 ZBTB12Q9Y330 459 aaPredicted RBP21.95■■□□□ 1.1
HSPG2-204ENST00000412328 USP50Q70EL3 339 aaPredicted RBP21.94■■□□□ 1.1
HSPG2-204ENST00000412328 ARHGAP45Q92619 1136 aa21.94■■□□□ 1.1
HSPG2-204ENST00000412328 MPHOSPH8Q99549 860 aa21.94■■□□□ 1.1
HSPG2-204ENST00000412328 API5Q9BZZ5 524 aaKnown RBP21.94■■□□□ 1.1
HSPG2-204ENST00000412328 ADARB2Q9NS39 739 aaKnown RBP21.94■■□□□ 1.1
HSPG2-204ENST00000412328 LEMD3Q9Y2U8 911 aa21.94■■□□□ 1.1
HSPG2-204ENST00000412328 ZNF804BA4D1E1 1349 aa21.94■■□□□ 1.1
HSPG2-204ENST00000412328 BCAR3O75815 825 aa21.93■■□□□ 1.1
HSPG2-204ENST00000412328 PCNTO95613 3336 aa21.93■■□□□ 1.1
HSPG2-204ENST00000412328 VIL1P09327 827 aaKnown RBP21.93■■□□□ 1.1
HSPG2-204ENST00000412328 HIRAP54198 1017 aaPredicted RBP21.93■■□□□ 1.1
HSPG2-204ENST00000412328 TRPM4Q8TD43 1214 aa21.93■■□□□ 1.1
HSPG2-204ENST00000412328 DPF2Q92785 391 aa21.93■■□□□ 1.1
HSPG2-204ENST00000412328 ANKRD2Q9GZV1 360 aa21.93■■□□□ 1.1
HSPG2-204ENST00000412328 TNNQ9UQP3 1299 aa21.93■■□□□ 1.1
HSPG2-204ENST00000412328 CHMP3Q9Y3E7 222 aa21.93■■□□□ 1.1
HSPG2-204ENST00000412328 SNAP23O00161 211 aa21.92■■□□□ 1.1
HSPG2-204ENST00000412328 EGFRP00533 1210 aa21.92■■□□□ 1.1
HSPG2-204ENST00000412328 MAP1SQ66K74 1059 aaPredicted RBP21.92■■□□□ 1.1
HSPG2-204ENST00000412328 C15orf52Q6ZUT6 534 aaKnown RBP21.92■■□□□ 1.1
HSPG2-204ENST00000412328 GMLQ99445 158 aa21.92■■□□□ 1.1
HSPG2-204ENST00000412328 TRIM27P14373 513 aa21.91■■□□□ 1.1
HSPG2-204ENST00000412328 RPS12P25398 132 aaKnown RBP21.91■■□□□ 1.1
HSPG2-204ENST00000412328 CCDC57Q2TAC2 916 aa21.91■■□□□ 1.1
HSPG2-204ENST00000412328 MICALL2Q8IY33 904 aa21.91■■□□□ 1.1
HSPG2-204ENST00000412328 PUS3Q9BZE2 481 aaKnown RBP21.91■■□□□ 1.1
HSPG2-204ENST00000412328 PGAP2Q9UHJ9 254 aa21.91■■□□□ 1.1
HSPG2-204ENST00000412328 TAF5LO75529 589 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms