RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 CIAPIN1Q6FI81 312 aa20.46■□□□□ 0.87
DDR1-230ENST00000412274 ANKRD2Q9GZV1 360 aa20.46■□□□□ 0.87
DDR1-230ENST00000412274 GJA3Q9Y6H8 435 aa20.46■□□□□ 0.87
DDR1-230ENST00000412274 UTYO14607 1347 aa20.46■□□□□ 0.87
DDR1-230ENST00000412274 COL4A5P29400 1685 aa20.45■□□□□ 0.86
DDR1-230ENST00000412274 EPHX2P34913 555 aa20.45■□□□□ 0.86
DDR1-230ENST00000412274 FOXO4P98177 505 aa20.45■□□□□ 0.86
DDR1-230ENST00000412274 SLC51AQ86UW1 340 aa20.45■□□□□ 0.86
DDR1-230ENST00000412274 LDHDQ86WU2 507 aa20.45■□□□□ 0.86
DDR1-230ENST00000412274 API5Q9BZZ5 524 aaKnown RBP20.45■□□□□ 0.86
DDR1-230ENST00000412274 MINPP1Q9UNW1 487 aa20.45■□□□□ 0.86
DDR1-230ENST00000412274 LTBP1Q14766 1721 aa20.44■□□□□ 0.86
DDR1-230ENST00000412274 G3V3G9 751 aa20.44■□□□□ 0.86
DDR1-230ENST00000412274 UFL1O94874 794 aa20.44■□□□□ 0.86
DDR1-230ENST00000412274 CXCL9Q07325 125 aa20.44■□□□□ 0.86
DDR1-230ENST00000412274 DCAF8Q5TAQ9 597 aa20.44■□□□□ 0.86
DDR1-230ENST00000412274 CHADLQ6NUI6 762 aa20.44■□□□□ 0.86
DDR1-230ENST00000412274 ARHGAP45Q92619 1136 aa20.44■□□□□ 0.86
DDR1-230ENST00000412274 HDAC5Q9UQL6 1122 aa20.44■□□□□ 0.86
DDR1-230ENST00000412274 LEMD3Q9Y2U8 911 aa20.44■□□□□ 0.86
DDR1-230ENST00000412274 KIF16BQ96L93 1317 aa20.44■□□□□ 0.86
DDR1-230ENST00000412274 CCT4P50991 539 aaKnown RBP20.43■□□□□ 0.86
DDR1-230ENST00000412274 RARSP54136 660 aaKnown RBP20.43■□□□□ 0.86
DDR1-230ENST00000412274 CCDC57Q2TAC2 916 aa20.43■□□□□ 0.86
DDR1-230ENST00000412274 FAM161AQ3B820 660 aa20.43■□□□□ 0.86
DDR1-230ENST00000412274 BCL2L13Q9BXK5 485 aa20.43■□□□□ 0.86
DDR1-230ENST00000412274 LMBR1LQ6UX01 489 aa20.42■□□□□ 0.86
DDR1-230ENST00000412274 USP50Q70EL3 339 aaPredicted RBP20.42■□□□□ 0.86
DDR1-230ENST00000412274 COL4A1P02462 1669 aa20.42■□□□□ 0.86
DDR1-230ENST00000412274 RIMBP2O15034 1052 aa20.41■□□□□ 0.86
DDR1-230ENST00000412274 IPO8O15397 1037 aaKnown RBP20.41■□□□□ 0.86
DDR1-230ENST00000412274 CHMP3Q9Y3E7 222 aa20.41■□□□□ 0.86
DDR1-230ENST00000412274 ZBED9Q6R2W3 1325 aa20.41■□□□□ 0.86
DDR1-230ENST00000412274 ECE2O60344 883 aa20.4■□□□□ 0.86
DDR1-230ENST00000412274 RPS12P25398 132 aaKnown RBP20.4■□□□□ 0.86
DDR1-230ENST00000412274 SCNN1DP51172 638 aa20.4■□□□□ 0.86
DDR1-230ENST00000412274 TAF7LQ5H9L4 462 aa20.4■□□□□ 0.86
DDR1-230ENST00000412274 DPF2Q92785 391 aa20.4■□□□□ 0.86
DDR1-230ENST00000412274 ADARB2Q9NS39 739 aaKnown RBP20.4■□□□□ 0.86
DDR1-230ENST00000412274 GPRC5DQ9NZD1 345 aa20.4■□□□□ 0.86
DDR1-230ENST00000412274 NOB1Q9ULX3 412 aaKnown RBP20.4■□□□□ 0.86
DDR1-230ENST00000412274 MED23Q9ULK4 1368 aa20.39■□□□□ 0.85
DDR1-230ENST00000412274 RAD17O75943 681 aa20.39■□□□□ 0.85
DDR1-230ENST00000412274 PODNQ7Z5L7 613 aa20.39■□□□□ 0.85
DDR1-230ENST00000412274 DBNDD1Q9H9R9 158 aa20.39■□□□□ 0.85
DDR1-230ENST00000412274 YDJCA8MPS7 323 aa20.38■□□□□ 0.85
DDR1-230ENST00000412274 NBPF7P0C2Y1 421 aaPredicted RBP20.38■□□□□ 0.85
DDR1-230ENST00000412274 EAPPQ56P03 285 aaPredicted RBP20.38■□□□□ 0.85
DDR1-230ENST00000412274 CLEC11AQ9Y240 323 aa20.38■□□□□ 0.85
DDR1-230ENST00000412274 RABL6Q3YEC7 729 aaPredicted RBP20.37■□□□□ 0.85
DDR1-230ENST00000412274 LDHAL6AQ6ZMR3 332 aa20.37■□□□□ 0.85
DDR1-230ENST00000412274 SUCLG2Q96I99 432 aa20.37■□□□□ 0.85
DDR1-230ENST00000412274 USP44Q9H0E7 712 aa20.37■□□□□ 0.85
DDR1-230ENST00000412274 ZNF804BA4D1E1 1349 aa20.36■□□□□ 0.85
DDR1-230ENST00000412274 H7C1D1 291 aa20.36■□□□□ 0.85
DDR1-230ENST00000412274 GMPSP49915 693 aaPredicted RBP20.36■□□□□ 0.85
DDR1-230ENST00000412274 CHRNDQ07001 517 aa20.36■□□□□ 0.85
DDR1-230ENST00000412274 DOK7Q18PE1 504 aa20.36■□□□□ 0.85
DDR1-230ENST00000412274 EPHA10Q5JZY3 1008 aa20.36■□□□□ 0.85
DDR1-230ENST00000412274 COA1Q9GZY4 146 aa20.36■□□□□ 0.85
DDR1-230ENST00000412274 PSMD14O00487 310 aa20.35■□□□□ 0.85
DDR1-230ENST00000412274 VIL1P09327 827 aaKnown RBP20.35■□□□□ 0.85
DDR1-230ENST00000412274 EPS15P42566 896 aa20.35■□□□□ 0.85
DDR1-230ENST00000412274 KCNJ4P48050 445 aa20.35■□□□□ 0.85
DDR1-230ENST00000412274 MMP14P50281 582 aa20.35■□□□□ 0.85
DDR1-230ENST00000412274 ZC3H15Q8WU90 426 aaKnown RBP20.35■□□□□ 0.85
DDR1-230ENST00000412274 ZNF609O15014 1411 aa20.35■□□□□ 0.85
DDR1-230ENST00000412274 SPEF2Q9C093 1822 aa20.34■□□□□ 0.85
DDR1-230ENST00000412274 ADAMTSL1Q8N6G6 1762 aa20.34■□□□□ 0.85
DDR1-230ENST00000412274 C15orf52Q6ZUT6 534 aaKnown RBP20.34■□□□□ 0.85
DDR1-230ENST00000412274 KAZALD1Q96I82 304 aa20.34■□□□□ 0.85
DDR1-230ENST00000412274 BICC1Q9H694 974 aaKnown RBP20.34■□□□□ 0.85
DDR1-230ENST00000412274 CNNM1Q9NRU3 951 aa20.34■□□□□ 0.85
DDR1-230ENST00000412274 CNOT7Q9UIV1 285 aaKnown RBP20.34■□□□□ 0.85
DDR1-230ENST00000412274 POTEIP0CG38 1075 aa20.33■□□□□ 0.85
DDR1-230ENST00000412274 POTEJP0CG39 1038 aa20.33■□□□□ 0.85
DDR1-230ENST00000412274 AGBL3Q8NEM8 1001 aa20.33■□□□□ 0.85
DDR1-230ENST00000412274 USP17L3A6NCW0 530 aa20.32■□□□□ 0.84
DDR1-230ENST00000412274 USP17L4A6NCW7 530 aa20.32■□□□□ 0.84
DDR1-230ENST00000412274 UBTFL1P0CB47 393 aaPredicted RBP20.32■□□□□ 0.84
DDR1-230ENST00000412274 INTS3Q68E01 1043 aaKnown RBP20.32■□□□□ 0.84
DDR1-230ENST00000412274 USP17L1Q7RTZ2 530 aa20.32■□□□□ 0.84
DDR1-230ENST00000412274 CNTROBQ8N137 903 aa20.32■□□□□ 0.84
DDR1-230ENST00000412274 GPR101Q96P66 508 aaPredicted RBP20.32■□□□□ 0.84
DDR1-230ENST00000412274 MROH5Q6ZUA9 1318 aa20.31■□□□□ 0.84
DDR1-230ENST00000412274 RSBN1LQ6PCB5 846 aaPredicted RBP20.31■□□□□ 0.84
DDR1-230ENST00000412274 ATF7IPQ6VMQ6 1270 aa20.31■□□□□ 0.84
DDR1-230ENST00000412274 CREBZFQ9NS37 354 aa20.31■□□□□ 0.84
DDR1-230ENST00000412274 MYO3BQ8WXR4 1341 aa20.3■□□□□ 0.84
DDR1-230ENST00000412274 PASKQ96RG2 1323 aa20.3■□□□□ 0.84
DDR1-230ENST00000412274 ITGBL1O95965 494 aaPredicted RBP20.3■□□□□ 0.84
DDR1-230ENST00000412274 GNAI3P08754 354 aa20.3■□□□□ 0.84
DDR1-230ENST00000412274 MICALL2Q8IY33 904 aa20.3■□□□□ 0.84
DDR1-230ENST00000412274 ANKRD44Q8N8A2 993 aa20.3■□□□□ 0.84
DDR1-230ENST00000412274 PGAP2Q9UHJ9 254 aa20.3■□□□□ 0.84
DDR1-230ENST00000412274 UBE4AQ14139 1066 aa20.29■□□□□ 0.84
DDR1-230ENST00000412274 STRIP1Q5VSL9 837 aa20.29■□□□□ 0.84
DDR1-230ENST00000412274 ZNF594Q96JF6 807 aaPredicted RBP20.29■□□□□ 0.84
DDR1-230ENST00000412274 FBXO3Q9UK99 471 aa20.29■□□□□ 0.84
DDR1-230ENST00000412274 ZBTB12Q9Y330 459 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms