RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 CASP7P55210 303 aa12.95□□□□□ -0.34
LINC01643-201ENST00000412218 ANKRD18AQ8IVF6 992 aa12.95□□□□□ -0.34
LINC01643-201ENST00000412218 CNTROBQ8N137 903 aa12.95□□□□□ -0.34
LINC01643-201ENST00000412218 LINS1Q8NG48 757 aa12.95□□□□□ -0.34
LINC01643-201ENST00000412218 GPR101Q96P66 508 aaPredicted RBP12.95□□□□□ -0.34
LINC01643-201ENST00000412218 GREM2Q9H772 168 aa12.95□□□□□ -0.34
LINC01643-201ENST00000412218 DBNDD1Q9H9R9 158 aa12.95□□□□□ -0.34
LINC01643-201ENST00000412218 ADARB2Q9NS39 739 aaKnown RBP12.95□□□□□ -0.34
LINC01643-201ENST00000412218 SUPT16HQ9Y5B9 1047 aaKnown RBP12.95□□□□□ -0.34
LINC01643-201ENST00000412218 RIMBP2O15034 1052 aa12.94□□□□□ -0.34
LINC01643-201ENST00000412218 ECE2O60344 883 aa12.94□□□□□ -0.34
LINC01643-201ENST00000412218 UFL1O94874 794 aa12.94□□□□□ -0.34
LINC01643-201ENST00000412218 CDC5LQ99459 802 aaKnown RBP12.94□□□□□ -0.34
LINC01643-201ENST00000412218 PLA2G12BQ9BX93 195 aa12.94□□□□□ -0.34
LINC01643-201ENST00000412218 ANKIB1Q9P2G1 1089 aa12.94□□□□□ -0.34
LINC01643-201ENST00000412218 GGA1Q9UJY5 639 aa12.94□□□□□ -0.34
LINC01643-201ENST00000412218 XDHP47989 1333 aa12.93□□□□□ -0.34
LINC01643-201ENST00000412218 TMEM88BA6NKF7 163 aa12.93□□□□□ -0.34
LINC01643-201ENST00000412218 F6X3S4 739 aa12.93□□□□□ -0.34
LINC01643-201ENST00000412218 DOK7Q18PE1 504 aa12.93□□□□□ -0.34
LINC01643-201ENST00000412218 BCL2L13Q9BXK5 485 aa12.93□□□□□ -0.34
LINC01643-201ENST00000412218 CNTNAP1P78357 1384 aa12.93□□□□□ -0.34
LINC01643-201ENST00000412218 PSMD14O00487 310 aa12.92□□□□□ -0.34
LINC01643-201ENST00000412218 BEND3Q5T5X7 828 aa12.92□□□□□ -0.34
LINC01643-201ENST00000412218 ZC3H12CQ9C0D7 883 aaKnown RBP12.92□□□□□ -0.34
LINC01643-201ENST00000412218 BSDC1Q9NW68 430 aaPredicted RBP12.92□□□□□ -0.34
LINC01643-201ENST00000412218 MKRN1Q9UHC7 482 aaKnown RBP12.92□□□□□ -0.34
LINC01643-201ENST00000412218 ZBTB12Q9Y330 459 aaPredicted RBP12.92□□□□□ -0.34
LINC01643-201ENST00000412218 SHTN1A0MZ66 631 aa12.91□□□□□ -0.34
LINC01643-201ENST00000412218 ATP2B4P23634 1241 aa12.91□□□□□ -0.34
LINC01643-201ENST00000412218 FAM161AQ3B820 660 aa12.91□□□□□ -0.34
LINC01643-201ENST00000412218 TRPM4Q8TD43 1214 aa12.91□□□□□ -0.34
LINC01643-201ENST00000412218 DPF2Q92785 391 aa12.91□□□□□ -0.34
LINC01643-201ENST00000412218 KCNQ5Q9NR82 932 aa12.91□□□□□ -0.34
LINC01643-201ENST00000412218 CNOT7Q9UIV1 285 aaKnown RBP12.91□□□□□ -0.34
LINC01643-201ENST00000412218 MINPP1Q9UNW1 487 aa12.91□□□□□ -0.34
LINC01643-201ENST00000412218 ZNF609O15014 1411 aa12.9□□□□□ -0.34
LINC01643-201ENST00000412218 E9PSI1 815 aa12.9□□□□□ -0.34
LINC01643-201ENST00000412218 CSF1RP07333 972 aa12.9□□□□□ -0.34
LINC01643-201ENST00000412218 ITGA6P23229 1130 aa12.9□□□□□ -0.34
LINC01643-201ENST00000412218 RPS12P25398 132 aaKnown RBP12.9□□□□□ -0.34
LINC01643-201ENST00000412218 HIRAP54198 1017 aaPredicted RBP12.9□□□□□ -0.34
LINC01643-201ENST00000412218 MICALL2Q8IY33 904 aa12.9□□□□□ -0.34
LINC01643-201ENST00000412218 PGAP2Q9UHJ9 254 aa12.9□□□□□ -0.34
LINC01643-201ENST00000412218 MED23Q9ULK4 1368 aa12.9□□□□□ -0.34
LINC01643-201ENST00000412218 MYH3P11055 1940 aa12.9□□□□□ -0.35
LINC01643-201ENST00000412218 TRAF5O00463 557 aa12.89□□□□□ -0.35
LINC01643-201ENST00000412218 IGHMBP2P38935 993 aaKnown RBP12.89□□□□□ -0.35
LINC01643-201ENST00000412218 FMR1Q06787 632 aaKnown RBP eCLIP12.89□□□□□ -0.35
LINC01643-201ENST00000412218 ZC3H15Q8WU90 426 aaKnown RBP12.89□□□□□ -0.35
LINC01643-201ENST00000412218 CACNA1FO60840 1977 aa12.89□□□□□ -0.35
LINC01643-201ENST00000412218 SPEF2Q9C093 1822 aa12.88□□□□□ -0.35
LINC01643-201ENST00000412218 WTIPA6NIX2 430 aaPredicted RBP12.88□□□□□ -0.35
LINC01643-201ENST00000412218 RASSF10A6NK89 507 aa12.88□□□□□ -0.35
LINC01643-201ENST00000412218 G3V3G9 751 aa12.88□□□□□ -0.35
LINC01643-201ENST00000412218 H7C1D1 291 aa12.88□□□□□ -0.35
LINC01643-201ENST00000412218 VIL1P09327 827 aaKnown RBP12.88□□□□□ -0.35
LINC01643-201ENST00000412218 HSPA1AP0DMV8 641 aaKnown RBP12.88□□□□□ -0.35
LINC01643-201ENST00000412218 HSPA1BP0DMV9 641 aaKnown RBP12.88□□□□□ -0.35
LINC01643-201ENST00000412218 FOXO4P98177 505 aa12.88□□□□□ -0.35
LINC01643-201ENST00000412218 SLFN5Q08AF3 891 aa12.88□□□□□ -0.35
LINC01643-201ENST00000412218 DCAF8Q5TAQ9 597 aa12.88□□□□□ -0.35
LINC01643-201ENST00000412218 GRM8O00222 908 aa12.87□□□□□ -0.35
LINC01643-201ENST00000412218 ALDH1L1O75891 902 aa12.87□□□□□ -0.35
LINC01643-201ENST00000412218 EGFRP00533 1210 aa12.87□□□□□ -0.35
LINC01643-201ENST00000412218 VEGFBP49765 207 aa12.87□□□□□ -0.35
LINC01643-201ENST00000412218 CCT4P50991 539 aaKnown RBP12.87□□□□□ -0.35
LINC01643-201ENST00000412218 CST9Q5W186 159 aa12.87□□□□□ -0.35
LINC01643-201ENST00000412218 SAMD7Q7Z3H4 446 aa12.87□□□□□ -0.35
LINC01643-201ENST00000412218 MRPL50Q8N5N7 158 aaKnown RBP12.87□□□□□ -0.35
LINC01643-201ENST00000412218 GLIS2Q9BZE0 524 aaPredicted RBP12.87□□□□□ -0.35
LINC01643-201ENST00000412218 ANKRD18BA2A2Z9 1011 aa12.86□□□□□ -0.35
LINC01643-201ENST00000412218 TBC1D10BQ4KMP7 808 aaPredicted RBP12.86□□□□□ -0.35
LINC01643-201ENST00000412218 ERICH6BQ5W0A0 696 aa12.86□□□□□ -0.35
LINC01643-201ENST00000412218 RSBN1LQ6PCB5 846 aaPredicted RBP12.86□□□□□ -0.35
LINC01643-201ENST00000412218 SLC4A10Q6U841 1118 aa12.86□□□□□ -0.35
LINC01643-201ENST00000412218 PODNQ7Z5L7 613 aa12.86□□□□□ -0.35
LINC01643-201ENST00000412218 MPHOSPH8Q99549 860 aa12.86□□□□□ -0.35
LINC01643-201ENST00000412218 SRCIN1Q9C0H9 1055 aa12.86□□□□□ -0.35
LINC01643-201ENST00000412218 ANKRD2Q9GZV1 360 aa12.86□□□□□ -0.35
LINC01643-201ENST00000412218 ABT1Q9ULW3 272 aaKnown RBP12.86□□□□□ -0.35
LINC01643-201ENST00000412218 LEMD3Q9Y2U8 911 aa12.86□□□□□ -0.35
LINC01643-201ENST00000412218 SCN9AQ15858 1988 aa12.86□□□□□ -0.35
LINC01643-201ENST00000412218 THSD7BQ9C0I4 1608 aa12.85□□□□□ -0.35
LINC01643-201ENST00000412218 ZNF280AP59817 542 aaPredicted RBP12.85□□□□□ -0.35
LINC01643-201ENST00000412218 CHRNDQ07001 517 aa12.85□□□□□ -0.35
LINC01643-201ENST00000412218 IFIT5Q13325 482 aaKnown RBP12.85□□□□□ -0.35
LINC01643-201ENST00000412218 KIF4BQ2VIQ3 1234 aa12.85□□□□□ -0.35
LINC01643-201ENST00000412218 DEFB115Q30KQ5 88 aa12.85□□□□□ -0.35
LINC01643-201ENST00000412218 EPHA10Q5JZY3 1008 aa12.85□□□□□ -0.35
LINC01643-201ENST00000412218 CDC37L1Q7L3B6 337 aa12.85□□□□□ -0.35
LINC01643-201ENST00000412218 AGBL3Q8NEM8 1001 aa12.85□□□□□ -0.35
LINC01643-201ENST00000412218 SSH1Q8WYL5 1049 aa12.85□□□□□ -0.35
LINC01643-201ENST00000412218 CDCA7LQ96GN5 454 aa12.85□□□□□ -0.35
LINC01643-201ENST00000412218 C9orf78Q9NZ63 289 aaPredicted RBP12.85□□□□□ -0.35
LINC01643-201ENST00000412218 ZNF804BA4D1E1 1349 aa12.85□□□□□ -0.35
LINC01643-201ENST00000412218 PTPRCP08575 1304 aa12.85□□□□□ -0.35
LINC01643-201ENST00000412218 PSME4Q14997 1843 aa12.84□□□□□ -0.35
LINC01643-201ENST00000412218 USP17L3A6NCW0 530 aa12.84□□□□□ -0.35
LINC01643-201ENST00000412218 USP17L4A6NCW7 530 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms