RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 SAMD7Q7Z3H4 446 aa21.3■■□□□ 1
SCAMP4-203ENST00000411971 PI4KAP1Q8N8J0 262 aa21.3■■□□□ 1
SCAMP4-203ENST00000411971 CDHR2Q9BYE9 1310 aa21.29■■□□□ 1
SCAMP4-203ENST00000411971 PDE8AO60658 829 aa21.29■■□□□ 1
SCAMP4-203ENST00000411971 CWF19L2Q2TBE0 894 aaKnown RBP21.29■■□□□ 1
SCAMP4-203ENST00000411971 TLL2Q9Y6L7 1015 aa21.29■■□□□ 1
SCAMP4-203ENST00000411971 KSR2Q6VAB6 950 aa21.28■■□□□ 1
SCAMP4-203ENST00000411971 CAPNS2Q96L46 248 aa21.28■■□□□ 1
SCAMP4-203ENST00000411971 PODXL2Q9NZ53 605 aa21.28■■□□□ 1
SCAMP4-203ENST00000411971 CELF2O95319 508 aaKnown RBP21.27■■□□□ 1
SCAMP4-203ENST00000411971 LBX1P52954 281 aa21.27■■□□□ 1
SCAMP4-203ENST00000411971 TBC1D10BQ4KMP7 808 aaPredicted RBP21.27■■□□□ 1
SCAMP4-203ENST00000411971 AOC2O75106 756 aa21.26■□□□□ 0.99
SCAMP4-203ENST00000411971 UFL1O94874 794 aa21.26■□□□□ 0.99
SCAMP4-203ENST00000411971 HSPA8P11142 646 aaKnown RBP21.26■□□□□ 0.99
SCAMP4-203ENST00000411971 GRM1Q13255 1194 aa21.26■□□□□ 0.99
SCAMP4-203ENST00000411971 TWISTNBQ3B726 338 aaPredicted RBP21.26■□□□□ 0.99
SCAMP4-203ENST00000411971 SAPCD2Q86UD0 394 aa21.26■□□□□ 0.99
SCAMP4-203ENST00000411971 SALL2Q9Y467 1007 aaPredicted RBP21.26■□□□□ 0.99
SCAMP4-203ENST00000411971 ASTN2O75129 1339 aaPredicted RBP21.26■□□□□ 0.99
SCAMP4-203ENST00000411971 CACNA1FO60840 1977 aa21.25■□□□□ 0.99
SCAMP4-203ENST00000411971 DDX58O95786 925 aaKnown RBP21.25■□□□□ 0.99
SCAMP4-203ENST00000411971 CCDC152Q4G0S7 254 aa21.25■□□□□ 0.99
SCAMP4-203ENST00000411971 DPF2Q92785 391 aa21.25■□□□□ 0.99
SCAMP4-203ENST00000411971 SPINK5Q9NQ38 1064 aaPredicted RBP21.25■□□□□ 0.99
SCAMP4-203ENST00000411971 NEURL1BA8MQ27 555 aa21.24■□□□□ 0.99
SCAMP4-203ENST00000411971 CTCFP49711 727 aaPredicted RBP21.24■□□□□ 0.99
SCAMP4-203ENST00000411971 CTSWP56202 376 aa21.24■□□□□ 0.99
SCAMP4-203ENST00000411971 PAXIP1Q6ZW49 1069 aaPredicted RBP21.24■□□□□ 0.99
SCAMP4-203ENST00000411971 USP48Q86UV5 1035 aa21.24■□□□□ 0.99
SCAMP4-203ENST00000411971 TTLL11Q8NHH1 800 aa21.24■□□□□ 0.99
SCAMP4-203ENST00000411971 ZC3H15Q8WU90 426 aaKnown RBP21.24■□□□□ 0.99
SCAMP4-203ENST00000411971 GREM2Q9H772 168 aa21.24■□□□□ 0.99
SCAMP4-203ENST00000411971 MRS2Q9HD23 443 aa21.24■□□□□ 0.99
SCAMP4-203ENST00000411971 PRDM10Q9NQV6 1147 aa21.24■□□□□ 0.99
SCAMP4-203ENST00000411971 FANCIQ9NVI1 1328 aa21.24■□□□□ 0.99
SCAMP4-203ENST00000411971 H7C1D1 291 aa21.23■□□□□ 0.99
SCAMP4-203ENST00000411971 SLC4A2P04920 1241 aa21.23■□□□□ 0.99
SCAMP4-203ENST00000411971 RBM26Q5T8P6 1007 aaKnown RBP21.23■□□□□ 0.99
SCAMP4-203ENST00000411971 EYA3Q99504 573 aa21.23■□□□□ 0.99
SCAMP4-203ENST00000411971 ZNF408Q9H9D4 720 aa21.23■□□□□ 0.99
SCAMP4-203ENST00000411971 ANKIB1Q9P2G1 1089 aa21.23■□□□□ 0.99
SCAMP4-203ENST00000411971 VIL1P09327 827 aaKnown RBP21.22■□□□□ 0.99
SCAMP4-203ENST00000411971 AIDAQ96BJ3 306 aa21.22■□□□□ 0.99
SCAMP4-203ENST00000411971 ZIC5Q96T25 663 aa21.22■□□□□ 0.99
SCAMP4-203ENST00000411971 GGA1Q9UJY5 639 aa21.22■□□□□ 0.99
SCAMP4-203ENST00000411971 IL16Q14005 1332 aa21.22■□□□□ 0.99
SCAMP4-203ENST00000411971 ADM5C9JUS6 153 aa21.21■□□□□ 0.99
SCAMP4-203ENST00000411971 H7C1W4 665 aa21.21■□□□□ 0.99
SCAMP4-203ENST00000411971 CASP7P55210 303 aa21.21■□□□□ 0.99
SCAMP4-203ENST00000411971 CDC37L1Q7L3B6 337 aa21.21■□□□□ 0.99
SCAMP4-203ENST00000411971 ANKRD18AQ8IVF6 992 aa21.21■□□□□ 0.99
SCAMP4-203ENST00000411971 ZC3H12CQ9C0D7 883 aaKnown RBP21.21■□□□□ 0.99
SCAMP4-203ENST00000411971 A0A1B0GUL6 1792 aa21.2■□□□□ 0.99
SCAMP4-203ENST00000411971 VAMP4O75379 141 aa21.2■□□□□ 0.98
SCAMP4-203ENST00000411971 UBE3BQ7Z3V4 1068 aa21.2■□□□□ 0.98
SCAMP4-203ENST00000411971 STK31Q9BXU1 1019 aa21.2■□□□□ 0.98
SCAMP4-203ENST00000411971 TSKSQ9UJT2 592 aa21.2■□□□□ 0.98
SCAMP4-203ENST00000411971 RPS12P25398 132 aaKnown RBP21.19■□□□□ 0.98
SCAMP4-203ENST00000411971 MAP2K1Q02750 393 aaPredicted RBP21.19■□□□□ 0.98
SCAMP4-203ENST00000411971 FLIIQ13045 1269 aa21.19■□□□□ 0.98
SCAMP4-203ENST00000411971 GMLQ99445 158 aa21.19■□□□□ 0.98
SCAMP4-203ENST00000411971 MINPP1Q9UNW1 487 aa21.19■□□□□ 0.98
SCAMP4-203ENST00000411971 XDHP47989 1333 aa21.19■□□□□ 0.98
SCAMP4-203ENST00000411971 ZNF316A6NFI3 1004 aaPredicted RBP21.18■□□□□ 0.98
SCAMP4-203ENST00000411971 EXOSC9Q06265 439 aaKnown RBP21.18■□□□□ 0.98
SCAMP4-203ENST00000411971 GCKRQ14397 625 aa21.18■□□□□ 0.98
SCAMP4-203ENST00000411971 TXNRD3Q86VQ6 643 aa21.18■□□□□ 0.98
SCAMP4-203ENST00000411971 MXD3Q9BW11 206 aa21.18■□□□□ 0.98
SCAMP4-203ENST00000411971 CASP8AP2Q9UKL3 1982 aa21.17■□□□□ 0.98
SCAMP4-203ENST00000411971 HSP90B1P14625 803 aaKnown RBP21.17■□□□□ 0.98
SCAMP4-203ENST00000411971 KLRK1P26718 216 aa21.17■□□□□ 0.98
SCAMP4-203ENST00000411971 ECE1P42892 770 aa21.17■□□□□ 0.98
SCAMP4-203ENST00000411971 KIF4BQ2VIQ3 1234 aa21.17■□□□□ 0.98
SCAMP4-203ENST00000411971 KRT26Q7Z3Y9 468 aa21.17■□□□□ 0.98
SCAMP4-203ENST00000411971 ZNF609O15014 1411 aa21.17■□□□□ 0.98
SCAMP4-203ENST00000411971 NEXNQ0ZGT2 675 aa21.16■□□□□ 0.98
SCAMP4-203ENST00000411971 NCBP3Q53F19 620 aaKnown RBP21.16■□□□□ 0.98
SCAMP4-203ENST00000411971 RSBN1LQ6PCB5 846 aaPredicted RBP21.16■□□□□ 0.98
SCAMP4-203ENST00000411971 BSDC1Q9NW68 430 aaPredicted RBP21.16■□□□□ 0.98
SCAMP4-203ENST00000411971 SCAF8Q9UPN6 1271 aaKnown RBP21.16■□□□□ 0.98
SCAMP4-203ENST00000411971 F6X3S4 739 aa21.15■□□□□ 0.98
SCAMP4-203ENST00000411971 ATP2B4P23634 1241 aa21.15■□□□□ 0.98
SCAMP4-203ENST00000411971 ZNF280AP59817 542 aaPredicted RBP21.15■□□□□ 0.98
SCAMP4-203ENST00000411971 FAM161AQ3B820 660 aa21.15■□□□□ 0.98
SCAMP4-203ENST00000411971 DNAAF4Q8WXU2 420 aa21.15■□□□□ 0.98
SCAMP4-203ENST00000411971 CDC5LQ99459 802 aaKnown RBP21.15■□□□□ 0.98
SCAMP4-203ENST00000411971 GGA3Q9NZ52 723 aa21.15■□□□□ 0.98
SCAMP4-203ENST00000411971 CCT4P50991 539 aaKnown RBP21.14■□□□□ 0.97
SCAMP4-203ENST00000411971 FKBP5Q13451 457 aaPredicted RBP21.14■□□□□ 0.97
SCAMP4-203ENST00000411971 WDR63Q8IWG1 891 aa21.14■□□□□ 0.97
SCAMP4-203ENST00000411971 HHIPL1Q96JK4 782 aa21.14■□□□□ 0.97
SCAMP4-203ENST00000411971 PLA2G12BQ9BX93 195 aa21.14■□□□□ 0.97
SCAMP4-203ENST00000411971 CHMP4AQ9BY43 222 aa21.14■□□□□ 0.97
SCAMP4-203ENST00000411971 MED23Q9ULK4 1368 aa21.13■□□□□ 0.97
SCAMP4-203ENST00000411971 FAM155AB1AL88 458 aaPredicted RBP21.13■□□□□ 0.97
SCAMP4-203ENST00000411971 SNAP23O00161 211 aa21.13■□□□□ 0.97
SCAMP4-203ENST00000411971 ANP32CO43423 234 aa21.13■□□□□ 0.97
SCAMP4-203ENST00000411971 CSF1RP07333 972 aa21.13■□□□□ 0.97
SCAMP4-203ENST00000411971 MAP2K2P36507 400 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms