RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 IFI16Q16666 785 aaKnown RBP12.79□□□□□ -0.36
PRPF40A-202ENST00000410080 CUL7Q14999 1698 aa12.79□□□□□ -0.36
PRPF40A-202ENST00000410080 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.79□□□□□ -0.36
PRPF40A-202ENST00000410080 PPANQ9NQ55 473 aaKnown RBP12.79□□□□□ -0.36
PRPF40A-202ENST00000410080 FAM83GA6ND36 823 aa12.79□□□□□ -0.36
PRPF40A-202ENST00000410080 NOP9Q86U38 636 aaKnown RBP12.79□□□□□ -0.36
PRPF40A-202ENST00000410080 ZBTB24O43167 697 aaPredicted RBP12.79□□□□□ -0.36
PRPF40A-202ENST00000410080 ZBTB16Q05516 673 aa12.79□□□□□ -0.36
PRPF40A-202ENST00000410080 UBE3BQ7Z3V4 1068 aa12.79□□□□□ -0.36
PRPF40A-202ENST00000410080 TMC6Q7Z403 805 aa12.79□□□□□ -0.36
PRPF40A-202ENST00000410080 PLCB3Q01970 1234 aa12.78□□□□□ -0.36
PRPF40A-202ENST00000410080 CCDC14Q49A88 953 aa12.78□□□□□ -0.36
PRPF40A-202ENST00000410080 CCDC155Q8N6L0 562 aa12.78□□□□□ -0.36
PRPF40A-202ENST00000410080 PLVAPQ9BX97 442 aa12.78□□□□□ -0.36
PRPF40A-202ENST00000410080 CYP7A1P22680 504 aa12.78□□□□□ -0.36
PRPF40A-202ENST00000410080 GRPEL1Q9HAV7 217 aa12.78□□□□□ -0.36
PRPF40A-202ENST00000410080 KRT5P13647 590 aa12.78□□□□□ -0.36
PRPF40A-202ENST00000410080 SLFN5Q08AF3 891 aa12.78□□□□□ -0.36
PRPF40A-202ENST00000410080 HSP90AA4PQ58FG1 418 aa12.78□□□□□ -0.36
PRPF40A-202ENST00000410080 MSH6P52701 1360 aa12.78□□□□□ -0.36
PRPF40A-202ENST00000410080 WASLO00401 505 aaPredicted RBP12.78□□□□□ -0.36
PRPF40A-202ENST00000410080 C6orf50Q9HD87 102 aa12.78□□□□□ -0.36
PRPF40A-202ENST00000410080 ANKRD24Q8TF21 1146 aa12.78□□□□□ -0.36
PRPF40A-202ENST00000410080 DNAAF4Q8WXU2 420 aa12.78□□□□□ -0.36
PRPF40A-202ENST00000410080 NAPAP54920 295 aa12.78□□□□□ -0.36
PRPF40A-202ENST00000410080 TMCO4Q5TGY1 634 aa12.77□□□□□ -0.36
PRPF40A-202ENST00000410080 KIF18AQ8NI77 898 aa12.77□□□□□ -0.36
PRPF40A-202ENST00000410080 ADGRF5Q8IZF2 1346 aa12.77□□□□□ -0.36
PRPF40A-202ENST00000410080 IARSP41252 1262 aaKnown RBP12.77□□□□□ -0.36
PRPF40A-202ENST00000410080 CCDC6Q16204 474 aa12.77□□□□□ -0.36
PRPF40A-202ENST00000410080 DAAM2Q86T65 1068 aa12.77□□□□□ -0.36
PRPF40A-202ENST00000410080 WTAPQ15007 396 aa12.77□□□□□ -0.37
PRPF40A-202ENST00000410080 SPECC1LQ69YQ0 1117 aa12.77□□□□□ -0.37
PRPF40A-202ENST00000410080 MICALCLQ6ZW33 695 aa12.77□□□□□ -0.37
PRPF40A-202ENST00000410080 AGTPBP1Q9UPW5 1226 aa12.77□□□□□ -0.37
PRPF40A-202ENST00000410080 PRKG1Q13976 671 aa12.77□□□□□ -0.37
PRPF40A-202ENST00000410080 SSH1Q8WYL5 1049 aa12.77□□□□□ -0.37
PRPF40A-202ENST00000410080 CCDC114Q96M63 670 aa12.77□□□□□ -0.37
PRPF40A-202ENST00000410080 SLC4A4Q9Y6R1 1079 aa12.77□□□□□ -0.37
PRPF40A-202ENST00000410080 PTGS1P23219 599 aa12.77□□□□□ -0.37
PRPF40A-202ENST00000410080 KRT9P35527 623 aa12.77□□□□□ -0.37
PRPF40A-202ENST00000410080 ZBTB9Q96C00 473 aa12.77□□□□□ -0.37
PRPF40A-202ENST00000410080 NAP1L3Q99457 506 aaPredicted RBP12.77□□□□□ -0.37
PRPF40A-202ENST00000410080 ANAPC4Q9UJX5 808 aa12.77□□□□□ -0.37
PRPF40A-202ENST00000410080 NOS1P29475 1434 aa12.77□□□□□ -0.37
PRPF40A-202ENST00000410080 TOM1O60784 492 aa12.76□□□□□ -0.37
PRPF40A-202ENST00000410080 ANXA1P04083 346 aa12.76□□□□□ -0.37
PRPF40A-202ENST00000410080 FBF1Q8TES7 1133 aa12.76□□□□□ -0.37
PRPF40A-202ENST00000410080 C11orf95C9JLR9 678 aaPredicted RBP12.76□□□□□ -0.37
PRPF40A-202ENST00000410080 HSF2BPO75031 334 aa12.76□□□□□ -0.37
PRPF40A-202ENST00000410080 RPAP2Q8IXW5 612 aaPredicted RBP12.76□□□□□ -0.37
PRPF40A-202ENST00000410080 CEP112Q8N8E3 955 aa12.76□□□□□ -0.37
PRPF40A-202ENST00000410080 KIFC2Q96AC6 838 aa12.76□□□□□ -0.37
PRPF40A-202ENST00000410080 TMOD4Q9NZQ9 345 aa12.76□□□□□ -0.37
PRPF40A-202ENST00000410080 USP16Q9Y5T5 823 aa12.76□□□□□ -0.37
PRPF40A-202ENST00000410080 GMNNO75496 209 aa12.76□□□□□ -0.37
PRPF40A-202ENST00000410080 CCDC183Q5T5S1 534 aa12.76□□□□□ -0.37
PRPF40A-202ENST00000410080 SELENOOQ9BVL4 669 aa12.76□□□□□ -0.37
PRPF40A-202ENST00000410080 NIP7Q9Y221 180 aaKnown RBP eCLIP12.76□□□□□ -0.37
PRPF40A-202ENST00000410080 C20orf194Q5TEA3 1177 aa12.76□□□□□ -0.37
PRPF40A-202ENST00000410080 LRRC27Q9C0I9 530 aa12.76□□□□□ -0.37
PRPF40A-202ENST00000410080 ZC3H12CQ9C0D7 883 aaKnown RBP12.76□□□□□ -0.37
PRPF40A-202ENST00000410080 FAM169AQ9Y6X4 670 aa12.76□□□□□ -0.37
PRPF40A-202ENST00000410080 CKAP4Q07065 602 aaKnown RBP12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 PPP2R5DQ14738 602 aa12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 ZSWIM4Q9H7M6 989 aa12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 NOC2LQ9Y3T9 749 aaKnown RBP12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 CFAP157Q5JU67 520 aa12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 ABCC5O15440 1437 aa12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 SMIM23A6NLE4 172 aa12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 DAPK3O43293 454 aa12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 TNNI2P48788 182 aa12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 TRERF1Q96PN7 1200 aa12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 RASAL2Q9UJF2 1139 aa12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 GTF3C6Q969F1 213 aa12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 CLSTN2Q9H4D0 955 aa12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 RIOK3O14730 519 aaKnown RBP12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 GSDMBQ8TAX9 411 aa12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 NLRP3Q96P20 1036 aa12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 ANO3Q9BYT9 981 aa12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 NYXQ9GZU5 481 aa12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 NOP56O00567 594 aaKnown RBP12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 KIF5AQ12840 1032 aa12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 RTCBQ9Y3I0 505 aaKnown RBP12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 IL27Q8NEV9 243 aa12.75□□□□□ -0.37
PRPF40A-202ENST00000410080 PPP1R9BQ96SB3 815 aa12.74□□□□□ -0.37
PRPF40A-202ENST00000410080 UAP1Q16222 522 aaPredicted RBP12.74□□□□□ -0.37
PRPF40A-202ENST00000410080 DDX12PQ92771 950 aa12.74□□□□□ -0.37
PRPF40A-202ENST00000410080 TTLL3Q9Y4R7 772 aa12.74□□□□□ -0.37
PRPF40A-202ENST00000410080 E7EVH7 732 aa12.74□□□□□ -0.37
PRPF40A-202ENST00000410080 NCOA7Q8NI08 942 aa12.74□□□□□ -0.37
PRPF40A-202ENST00000410080 GOLGA1Q92805 767 aa12.74□□□□□ -0.37
PRPF40A-202ENST00000410080 TBC1D31Q96DN5 1066 aa12.74□□□□□ -0.37
PRPF40A-202ENST00000410080 TEX13AQ9BXU3 409 aaPredicted RBP12.74□□□□□ -0.37
PRPF40A-202ENST00000410080 RNF216Q9NWF9 866 aaPredicted RBP12.74□□□□□ -0.37
PRPF40A-202ENST00000410080 SAP30BPQ9UHR5 308 aaKnown RBP12.74□□□□□ -0.37
PRPF40A-202ENST00000410080 IRX5P78411 483 aaPredicted RBP12.74□□□□□ -0.37
PRPF40A-202ENST00000410080 NAA16Q6N069 864 aaPredicted RBP12.74□□□□□ -0.37
PRPF40A-202ENST00000410080 TFIP11Q9UBB9 837 aaKnown RBP12.74□□□□□ -0.37
PRPF40A-202ENST00000410080 CCDC25Q86WR0 208 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms