RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 KIF4AO95239 1232 aa8.28□□□□□ -1.08
LSM5-206ENST00000409987 HOXD8P13378 290 aaPredicted RBP8.28□□□□□ -1.08
LSM5-206ENST00000409987 EDN3P14138 238 aa8.28□□□□□ -1.08
LSM5-206ENST00000409987 SOX18P35713 384 aa8.28□□□□□ -1.08
LSM5-206ENST00000409987 HDLBPQ00341 1268 aaKnown RBP8.28□□□□□ -1.08
LSM5-206ENST00000409987 GRM2Q14416 872 aa8.28□□□□□ -1.08
LSM5-206ENST00000409987 KIAA0319Q5VV43 1072 aa8.28□□□□□ -1.08
LSM5-206ENST00000409987 ZNF787Q6DD87 383 aa8.28□□□□□ -1.08
LSM5-206ENST00000409987 FOXR1Q6PIV2 292 aa8.28□□□□□ -1.08
LSM5-206ENST00000409987 CRELD1Q96HD1 420 aa8.28□□□□□ -1.08
LSM5-206ENST00000409987 BCO2Q9BYV7 579 aa8.28□□□□□ -1.08
LSM5-206ENST00000409987 ACPPP15309 386 aa8.27□□□□□ -1.09
LSM5-206ENST00000409987 PLAURQ03405 335 aa8.27□□□□□ -1.09
LSM5-206ENST00000409987 GLIS3Q8NEA6 775 aa8.27□□□□□ -1.09
LSM5-206ENST00000409987 ZBTB42B2RXF5 422 aa8.26□□□□□ -1.09
LSM5-206ENST00000409987 USP17L7P0C7H9 530 aa8.26□□□□□ -1.09
LSM5-206ENST00000409987 FANCCQ00597 558 aa8.26□□□□□ -1.09
LSM5-206ENST00000409987 HYAL2Q12891 473 aa8.26□□□□□ -1.09
LSM5-206ENST00000409987 C9orf131Q5VYM1 1079 aa8.26□□□□□ -1.09
LSM5-206ENST00000409987 METTL16Q86W50 562 aaKnown RBP8.26□□□□□ -1.09
LSM5-206ENST00000409987 CNTNAP3BQ96NU0 1288 aa8.26□□□□□ -1.09
LSM5-206ENST00000409987 NSUN5Q96P11 429 aaKnown RBP8.26□□□□□ -1.09
LSM5-206ENST00000409987 CNTNAP3Q9BZ76 1288 aa8.26□□□□□ -1.09
LSM5-206ENST00000409987 NRLP54845 237 aa8.25□□□□□ -1.09
LSM5-206ENST00000409987 NEUROD1Q13562 356 aa8.25□□□□□ -1.09
LSM5-206ENST00000409987 GAS6Q14393 721 aa8.25□□□□□ -1.09
LSM5-206ENST00000409987 SYT9Q86SS6 491 aa8.25□□□□□ -1.09
LSM5-206ENST00000409987 NCAPG2Q86XI2 1143 aa8.25□□□□□ -1.09
LSM5-206ENST00000409987 TRPM4Q8TD43 1214 aa8.25□□□□□ -1.09
LSM5-206ENST00000409987 EHD4Q9H223 541 aa8.25□□□□□ -1.09
LSM5-206ENST00000409987 FAM8A1Q9UBU6 413 aa8.25□□□□□ -1.09
LSM5-206ENST00000409987 BMP4P12644 408 aa8.24□□□□□ -1.09
LSM5-206ENST00000409987 GPLD1P80108 840 aa8.24□□□□□ -1.09
LSM5-206ENST00000409987 MEI1Q5TIA1 1274 aa8.24□□□□□ -1.09
LSM5-206ENST00000409987 ZNF468Q5VIY5 522 aaPredicted RBP8.24□□□□□ -1.09
LSM5-206ENST00000409987 CEP120Q8N960 986 aa8.24□□□□□ -1.09
LSM5-206ENST00000409987 ZKSCAN3Q9BRR0 538 aa8.24□□□□□ -1.09
LSM5-206ENST00000409987 SRCIN1Q9C0H9 1055 aa8.24□□□□□ -1.09
LSM5-206ENST00000409987 METTL5Q9NRN9 209 aaKnown RBP8.24□□□□□ -1.09
LSM5-206ENST00000409987 NXF1Q9UBU9 619 aaKnown RBP8.24□□□□□ -1.09
LSM5-206ENST00000409987 PRR12Q9ULL5 1215 aa8.24□□□□□ -1.09
LSM5-206ENST00000409987 TRPA1O75762 1119 aa8.23□□□□□ -1.09
LSM5-206ENST00000409987 ZNF76P36508 570 aa8.23□□□□□ -1.09
LSM5-206ENST00000409987 MLLT1Q03111 559 aaPredicted RBP8.23□□□□□ -1.09
LSM5-206ENST00000409987 PRPF40BQ6NWY9 871 aaKnown RBP8.23□□□□□ -1.09
LSM5-206ENST00000409987 GPR161Q8N6U8 529 aaKnown RBP8.23□□□□□ -1.09
LSM5-206ENST00000409987 ZNF775Q96BV0 537 aaPredicted RBP8.23□□□□□ -1.09
LSM5-206ENST00000409987 TCF12Q99081 682 aa8.23□□□□□ -1.09
LSM5-206ENST00000409987 OSMRQ99650 979 aa8.23□□□□□ -1.09
LSM5-206ENST00000409987 LIN7BQ9HAP6 207 aa8.23□□□□□ -1.09
LSM5-206ENST00000409987 DNAJB12Q9NXW2 375 aaKnown RBP8.23□□□□□ -1.09
LSM5-206ENST00000409987 USP31Q70CQ4 1352 aa8.22□□□□□ -1.09
LSM5-206ENST00000409987 J3QW42 95 aa8.22□□□□□ -1.09
LSM5-206ENST00000409987 SIN3BO75182 1162 aa8.22□□□□□ -1.09
LSM5-206ENST00000409987 PCBP4P57723 403 aaKnown RBP8.22□□□□□ -1.09
LSM5-206ENST00000409987 RAD51AP2Q09MP3 1159 aa8.22□□□□□ -1.09
LSM5-206ENST00000409987 HFE2Q6ZVN8 426 aa8.22□□□□□ -1.09
LSM5-206ENST00000409987 C3orf58Q8NDZ4 430 aa8.22□□□□□ -1.09
LSM5-206ENST00000409987 RNF34Q969K3 372 aa8.22□□□□□ -1.09
LSM5-206ENST00000409987 HHIPQ96QV1 700 aa8.22□□□□□ -1.09
LSM5-206ENST00000409987 IGFLR1Q9H665 355 aa8.22□□□□□ -1.09
LSM5-206ENST00000409987 ABCB6Q9NP58 842 aa8.22□□□□□ -1.09
LSM5-206ENST00000409987 DZANK1Q9NVP4 752 aa8.22□□□□□ -1.09
LSM5-206ENST00000409987 KLF15Q9UIH9 416 aa8.22□□□□□ -1.09
LSM5-206ENST00000409987 TRAK1Q9UPV9 953 aa8.22□□□□□ -1.09
LSM5-206ENST00000409987 LOC102724428A0A0B4J2F2 783 aa8.21□□□□□ -1.1
LSM5-206ENST00000409987 NFKBIEO00221 500 aa8.21□□□□□ -1.1
LSM5-206ENST00000409987 MX2P20592 715 aa8.21□□□□□ -1.1
LSM5-206ENST00000409987 ERCC5P28715 1186 aaPredicted RBP8.21□□□□□ -1.1
LSM5-206ENST00000409987 GSTT1P30711 240 aa8.21□□□□□ -1.1
LSM5-206ENST00000409987 SIK1P57059 783 aa8.21□□□□□ -1.1
LSM5-206ENST00000409987 TBC1D8BQ0IIM8 1120 aa8.21□□□□□ -1.1
LSM5-206ENST00000409987 NT5DC4Q86YG4 428 aa8.21□□□□□ -1.1
LSM5-206ENST00000409987 CCNJLQ8IV13 435 aa8.21□□□□□ -1.1
LSM5-206ENST00000409987 UBE2OQ9C0C9 1292 aaKnown RBP8.21□□□□□ -1.1
LSM5-206ENST00000409987 H3BM21 787 aa8.2□□□□□ -1.1
LSM5-206ENST00000409987 ST13P50502 369 aaKnown RBP8.2□□□□□ -1.1
LSM5-206ENST00000409987 FCGRTP55899 365 aa8.2□□□□□ -1.1
LSM5-206ENST00000409987 ATP11AP98196 1134 aa8.2□□□□□ -1.1
LSM5-206ENST00000409987 TAF1CQ15572 869 aaPredicted RBP8.2□□□□□ -1.1
LSM5-206ENST00000409987 RASSF4Q9H2L5 321 aa8.2□□□□□ -1.1
LSM5-206ENST00000409987 AVENQ9NQS1 362 aaPredicted RBP8.2□□□□□ -1.1
LSM5-206ENST00000409987 TMEM238LA0A1B0GVL6 79 aa8.19□□□□□ -1.1
LSM5-206ENST00000409987 NPAS3Q8IXF0 933 aa8.19□□□□□ -1.1
LSM5-206ENST00000409987 TNFRSF25Q93038 417 aa8.19□□□□□ -1.1
LSM5-206ENST00000409987 SPACA7Q96KW9 195 aa8.19□□□□□ -1.1
LSM5-206ENST00000409987 OXCT2Q9BYC2 517 aaPredicted RBP8.19□□□□□ -1.1
LSM5-206ENST00000409987 BHLHE41Q9C0J9 482 aaPredicted RBP8.19□□□□□ -1.1
LSM5-206ENST00000409987 METTL12A8MUP2 240 aa8.18□□□□□ -1.1
LSM5-206ENST00000409987 ARAFP10398 606 aa8.18□□□□□ -1.1
LSM5-206ENST00000409987 GRIA4P48058 902 aa8.18□□□□□ -1.1
LSM5-206ENST00000409987 TMEM102Q8N9M5 508 aaPredicted RBP8.18□□□□□ -1.1
LSM5-206ENST00000409987 NXPE3Q969Y0 559 aa8.18□□□□□ -1.1
LSM5-206ENST00000409987 C8orf37Q96NL8 207 aa8.18□□□□□ -1.1
LSM5-206ENST00000409987 MDFIQ99750 246 aa8.18□□□□□ -1.1
LSM5-206ENST00000409987 PBX4Q9BYU1 374 aa8.18□□□□□ -1.1
LSM5-206ENST00000409987 MBIPQ9NS73 344 aa8.18□□□□□ -1.1
LSM5-206ENST00000409987 PPP4R2Q9NY27 417 aa8.18□□□□□ -1.1
LSM5-206ENST00000409987 SLC6A14Q9UN76 642 aa8.18□□□□□ -1.1
LSM5-206ENST00000409987 VSIG8P0DPA2 414 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms