RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 GLRX3O76003 335 aaKnown RBP9.13□□□□□ -0.95
CXCR4-202ENST00000409817 PTPREP23469 700 aa9.13□□□□□ -0.95
CXCR4-202ENST00000409817 SUCLG2Q96I99 432 aa9.13□□□□□ -0.95
CXCR4-202ENST00000409817 MYD88Q99836 296 aa9.13□□□□□ -0.95
CXCR4-202ENST00000409817 TRIM6-TRIM34B2RNG4 842 aa9.13□□□□□ -0.95
CXCR4-202ENST00000409817 TRAK2O60296 914 aa9.13□□□□□ -0.95
CXCR4-202ENST00000409817 MCCP23508 829 aa9.13□□□□□ -0.95
CXCR4-202ENST00000409817 G3BP1Q13283 466 aaKnown RBP eCLIP9.13□□□□□ -0.95
CXCR4-202ENST00000409817 MAMSTRQ6ZN01 415 aa9.13□□□□□ -0.95
CXCR4-202ENST00000409817 CNTROBQ8N137 903 aa9.13□□□□□ -0.95
CXCR4-202ENST00000409817 POM121Q96HA1 1249 aa9.13□□□□□ -0.95
CXCR4-202ENST00000409817 KAZALD1Q96I82 304 aa9.13□□□□□ -0.95
CXCR4-202ENST00000409817 BICC1Q9H694 974 aaKnown RBP9.13□□□□□ -0.95
CXCR4-202ENST00000409817 IL1RAPL2Q9NP60 686 aa9.13□□□□□ -0.95
CXCR4-202ENST00000409817 CHMP5Q9NZZ3 219 aa9.13□□□□□ -0.95
CXCR4-202ENST00000409817 THRAP3Q9Y2W1 955 aaKnown RBP9.13□□□□□ -0.95
CXCR4-202ENST00000409817 COL16A1Q07092 1604 aaPredicted RBP9.12□□□□□ -0.95
CXCR4-202ENST00000409817 K7ELQ4 463 aaPredicted RBP9.12□□□□□ -0.95
CXCR4-202ENST00000409817 CHMLP26374 656 aa9.12□□□□□ -0.95
CXCR4-202ENST00000409817 ANAPC15P60006 121 aa9.12□□□□□ -0.95
CXCR4-202ENST00000409817 PROX2Q3B8N5 592 aa9.12□□□□□ -0.95
CXCR4-202ENST00000409817 RABL6Q3YEC7 729 aaPredicted RBP9.12□□□□□ -0.95
CXCR4-202ENST00000409817 PI4K2BQ8TCG2 481 aa9.12□□□□□ -0.95
CXCR4-202ENST00000409817 TATDN2Q93075 761 aa9.12□□□□□ -0.95
CXCR4-202ENST00000409817 ESYT1Q9BSJ8 1104 aa9.12□□□□□ -0.95
CXCR4-202ENST00000409817 TMEM134Q9H6X4 195 aa9.12□□□□□ -0.95
CXCR4-202ENST00000409817 TOGARAM1Q9Y4F4 1720 aa9.12□□□□□ -0.95
CXCR4-202ENST00000409817 RFC5P40937 340 aa9.11□□□□□ -0.95
CXCR4-202ENST00000409817 IL17RAQ96F46 866 aa9.11□□□□□ -0.95
CXCR4-202ENST00000409817 BCL11AQ9H165 835 aa9.11□□□□□ -0.95
CXCR4-202ENST00000409817 COPRSQ9NQ92 184 aa9.11□□□□□ -0.95
CXCR4-202ENST00000409817 ECHDC1Q9NTX5 307 aa9.11□□□□□ -0.95
CXCR4-202ENST00000409817 AFDNP55196 1824 aaKnown RBP9.11□□□□□ -0.95
CXCR4-202ENST00000409817 NUP188Q5SRE5 1749 aa9.11□□□□□ -0.95
CXCR4-202ENST00000409817 WNK3Q9BYP7 1800 aa9.11□□□□□ -0.95
CXCR4-202ENST00000409817 NBPF26B4DH59 902 aa9.11□□□□□ -0.95
CXCR4-202ENST00000409817 EXOC5O00471 708 aa9.11□□□□□ -0.95
CXCR4-202ENST00000409817 ST18O60284 1047 aa9.11□□□□□ -0.95
CXCR4-202ENST00000409817 IFIT2P09913 472 aaKnown RBP9.11□□□□□ -0.95
CXCR4-202ENST00000409817 DNAJB2P25686 324 aa9.11□□□□□ -0.95
CXCR4-202ENST00000409817 NBPF14Q5TI25 921 aa9.11□□□□□ -0.95
CXCR4-202ENST00000409817 NBPF10Q6P3W6 841 aaKnown RBP9.11□□□□□ -0.95
CXCR4-202ENST00000409817 NUTM1Q86Y26 1132 aa9.11□□□□□ -0.95
CXCR4-202ENST00000409817 NBPF15Q8N660 670 aa9.11□□□□□ -0.95
CXCR4-202ENST00000409817 CCDC191Q8NCU4 936 aa9.11□□□□□ -0.95
CXCR4-202ENST00000409817 RILPL2Q969X0 211 aa9.11□□□□□ -0.95
CXCR4-202ENST00000409817 SLKQ9H2G2 1235 aaPredicted RBP9.11□□□□□ -0.95
CXCR4-202ENST00000409817 SMAPO00193 183 aa9.1□□□□□ -0.95
CXCR4-202ENST00000409817 STARD3NLO95772 234 aa9.1□□□□□ -0.95
CXCR4-202ENST00000409817 DIXDC1Q155Q3 683 aa9.1□□□□□ -0.95
CXCR4-202ENST00000409817 PPP2R2DQ66LE6 453 aa9.1□□□□□ -0.95
CXCR4-202ENST00000409817 FNBP4Q8N3X1 1017 aaPredicted RBP9.1□□□□□ -0.95
CXCR4-202ENST00000409817 ARID3AQ99856 593 aa9.1□□□□□ -0.95
CXCR4-202ENST00000409817 CWC25Q9NXE8 425 aaPredicted RBP9.1□□□□□ -0.95
CXCR4-202ENST00000409817 PNMA3Q9UL41 463 aa9.1□□□□□ -0.95
CXCR4-202ENST00000409817 AK9Q5TCS8 1911 aa9.1□□□□□ -0.95
CXCR4-202ENST00000409817 PHLPP1O60346 1717 aa9.1□□□□□ -0.95
CXCR4-202ENST00000409817 BCL9O00512 1426 aa9.1□□□□□ -0.95
CXCR4-202ENST00000409817 A0A087WZG4 1122 aa9.09□□□□□ -0.95
CXCR4-202ENST00000409817 H7C1W4 665 aa9.09□□□□□ -0.95
CXCR4-202ENST00000409817 HIP1O00291 1037 aa9.09□□□□□ -0.95
CXCR4-202ENST00000409817 PTCD1O75127 700 aaKnown RBP9.09□□□□□ -0.95
CXCR4-202ENST00000409817 DDIT3P35638 169 aa9.09□□□□□ -0.95
CXCR4-202ENST00000409817 MCM2P49736 904 aa9.09□□□□□ -0.95
CXCR4-202ENST00000409817 CASP7P55210 303 aa9.09□□□□□ -0.95
CXCR4-202ENST00000409817 TRIM28Q13263 835 aaKnown RBP9.09□□□□□ -0.95
CXCR4-202ENST00000409817 RUFY2Q8WXA3 655 aa9.09□□□□□ -0.95
CXCR4-202ENST00000409817 SNRKQ9NRH2 765 aa9.09□□□□□ -0.95
CXCR4-202ENST00000409817 ITGB4P16144 1822 aa9.09□□□□□ -0.95
CXCR4-202ENST00000409817 DDX11L8A8MPP1 907 aa9.08□□□□□ -0.96
CXCR4-202ENST00000409817 TOM1O60784 492 aa9.08□□□□□ -0.96
CXCR4-202ENST00000409817 TSHZ3Q63HK5 1081 aa9.08□□□□□ -0.96
CXCR4-202ENST00000409817 UBE3BQ7Z3V4 1068 aa9.08□□□□□ -0.96
CXCR4-202ENST00000409817 PIGBQ92521 554 aa9.08□□□□□ -0.96
CXCR4-202ENST00000409817 EVI5LQ96CN4 794 aa9.08□□□□□ -0.96
CXCR4-202ENST00000409817 ATG3Q9NT62 314 aa9.08□□□□□ -0.96
CXCR4-202ENST00000409817 NWD2Q9ULI1 1742 aa9.08□□□□□ -0.96
CXCR4-202ENST00000409817 SPDYE5A6NIY4 337 aa9.08□□□□□ -0.96
CXCR4-202ENST00000409817 SPTLC1O15269 473 aa9.08□□□□□ -0.96
CXCR4-202ENST00000409817 SASH1O94885 1247 aa9.08□□□□□ -0.96
CXCR4-202ENST00000409817 A1BGP04217 495 aa9.08□□□□□ -0.96
CXCR4-202ENST00000409817 HSP90AA1P07900 732 aaKnown RBP9.08□□□□□ -0.96
CXCR4-202ENST00000409817 LHX8Q68G74 356 aa9.08□□□□□ -0.96
CXCR4-202ENST00000409817 RSBN1LQ6PCB5 846 aaPredicted RBP9.08□□□□□ -0.96
CXCR4-202ENST00000409817 AACSQ86V21 672 aa9.08□□□□□ -0.96
CXCR4-202ENST00000409817 TICAM2Q86XR7 235 aa9.08□□□□□ -0.96
CXCR4-202ENST00000409817 PA2G4Q9UQ80 394 aaKnown RBP9.08□□□□□ -0.96
CXCR4-202ENST00000409817 NRAPQ86VF7 1730 aa9.08□□□□□ -0.96
CXCR4-202ENST00000409817 MOXD2PA6NHM9 499 aa9.07□□□□□ -0.96
CXCR4-202ENST00000409817 SGSM2O43147 1006 aa9.07□□□□□ -0.96
CXCR4-202ENST00000409817 RFX5P48382 616 aaPredicted RBP9.07□□□□□ -0.96
CXCR4-202ENST00000409817 TUSC1Q2TAM9 212 aa9.07□□□□□ -0.96
CXCR4-202ENST00000409817 HSP90AB3PQ58FF7 597 aa9.07□□□□□ -0.96
CXCR4-202ENST00000409817 KIF6Q6ZMV9 814 aa9.07□□□□□ -0.96
CXCR4-202ENST00000409817 TTLL7Q6ZT98 887 aa9.07□□□□□ -0.96
CXCR4-202ENST00000409817 UNC5CLQ8IV45 518 aa9.07□□□□□ -0.96
CXCR4-202ENST00000409817 SULF1Q8IWU6 871 aa9.07□□□□□ -0.96
CXCR4-202ENST00000409817 KCNK17Q96T54 332 aa9.07□□□□□ -0.96
CXCR4-202ENST00000409817 ISCA1Q9BUE6 129 aa9.07□□□□□ -0.96
CXCR4-202ENST00000409817 ANO2Q9NQ90 1003 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms