RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 NSFL1CQ9UNZ2 370 aaKnown RBP23.66■■□□□ 1.38
LIMS2-207ENST00000409808 CDHR2Q9BYE9 1310 aa23.66■■□□□ 1.38
LIMS2-207ENST00000409808 ZNF500O60304 480 aaPredicted RBP23.66■■□□□ 1.38
LIMS2-207ENST00000409808 CSF1RP07333 972 aa23.66■■□□□ 1.38
LIMS2-207ENST00000409808 CCDC57Q2TAC2 916 aa23.66■■□□□ 1.38
LIMS2-207ENST00000409808 TNNI3KQ59H18 835 aa23.66■■□□□ 1.38
LIMS2-207ENST00000409808 SNX14Q9Y5W7 946 aa23.66■■□□□ 1.38
LIMS2-207ENST00000409808 FPGT-TNNI3KV9GXZ4 949 aa23.66■■□□□ 1.38
LIMS2-207ENST00000409808 UBE2Q2Q8WVN8 375 aa23.65■■□□□ 1.38
LIMS2-207ENST00000409808 TTC14Q96N46 770 aa23.65■■□□□ 1.38
LIMS2-207ENST00000409808 TSPY26PQ9H489 355 aa23.65■■□□□ 1.38
LIMS2-207ENST00000409808 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.65■■□□□ 1.38
LIMS2-207ENST00000409808 NOL8Q76FK4 1167 aaKnown RBP23.65■■□□□ 1.38
LIMS2-207ENST00000409808 TTLL11Q8NHH1 800 aa23.65■■□□□ 1.38
LIMS2-207ENST00000409808 GPATCH3Q96I76 525 aa23.65■■□□□ 1.38
LIMS2-207ENST00000409808 IL25Q9H293 177 aa23.65■■□□□ 1.38
LIMS2-207ENST00000409808 NIP7Q9Y221 180 aaKnown RBP eCLIP23.65■■□□□ 1.38
LIMS2-207ENST00000409808 CNTNAP4Q9C0A0 1308 aa23.65■■□□□ 1.38
LIMS2-207ENST00000409808 RRP9O43818 475 aaKnown RBP23.64■■□□□ 1.38
LIMS2-207ENST00000409808 AMIGO3Q86WK7 504 aa23.64■■□□□ 1.38
LIMS2-207ENST00000409808 GREM2Q9H772 168 aa23.64■■□□□ 1.38
LIMS2-207ENST00000409808 CCDC39Q9UFE4 941 aa23.64■■□□□ 1.38
LIMS2-207ENST00000409808 DBNLQ9UJU6 430 aaKnown RBP23.64■■□□□ 1.38
LIMS2-207ENST00000409808 LIMCH1Q9UPQ0 1083 aa23.64■■□□□ 1.38
LIMS2-207ENST00000409808 EYA2O00167 538 aa23.64■■□□□ 1.37
LIMS2-207ENST00000409808 MYH3P11055 1940 aa23.63■■□□□ 1.37
LIMS2-207ENST00000409808 HCLS1P14317 486 aaPredicted RBP23.63■■□□□ 1.37
LIMS2-207ENST00000409808 CHAMP1Q96JM3 812 aa23.63■■□□□ 1.37
LIMS2-207ENST00000409808 LY75O60449 1722 aa23.63■■□□□ 1.37
LIMS2-207ENST00000409808 GNPATO15228 680 aa23.62■■□□□ 1.37
LIMS2-207ENST00000409808 CTSWP56202 376 aa23.62■■□□□ 1.37
LIMS2-207ENST00000409808 KRT27Q7Z3Y8 459 aa23.62■■□□□ 1.37
LIMS2-207ENST00000409808 LETM1O95202 739 aaPredicted RBP23.62■■□□□ 1.37
LIMS2-207ENST00000409808 IFIT5Q13325 482 aaKnown RBP23.62■■□□□ 1.37
LIMS2-207ENST00000409808 DBNDD2Q9BQY9 259 aa23.62■■□□□ 1.37
LIMS2-207ENST00000409808 BCL11BQ9C0K0 894 aaPredicted RBP23.62■■□□□ 1.37
LIMS2-207ENST00000409808 BOLA2Q9H3K6 86 aa23.62■■□□□ 1.37
LIMS2-207ENST00000409808 ATP6V1DQ9Y5K8 247 aa23.62■■□□□ 1.37
LIMS2-207ENST00000409808 FAM184AQ8NB25 1140 aa23.61■■□□□ 1.37
LIMS2-207ENST00000409808 TAF1LQ8IZX4 1826 aa23.61■■□□□ 1.37
LIMS2-207ENST00000409808 BCORQ6W2J9 1755 aa23.61■■□□□ 1.37
LIMS2-207ENST00000409808 ITGA6P23229 1130 aa23.61■■□□□ 1.37
LIMS2-207ENST00000409808 IL15P40933 162 aaPredicted RBP23.61■■□□□ 1.37
LIMS2-207ENST00000409808 USP48Q86UV5 1035 aa23.61■■□□□ 1.37
LIMS2-207ENST00000409808 UTP14AQ9BVJ6 771 aaKnown RBP23.61■■□□□ 1.37
LIMS2-207ENST00000409808 ZKSCAN5Q9Y2L8 839 aa23.61■■□□□ 1.37
LIMS2-207ENST00000409808 PDE8AO60658 829 aa23.6■■□□□ 1.37
LIMS2-207ENST00000409808 TIMM10P62072 90 aa23.6■■□□□ 1.37
LIMS2-207ENST00000409808 UVSSAQ2YD98 709 aa23.6■■□□□ 1.37
LIMS2-207ENST00000409808 TAF7LQ5H9L4 462 aa23.6■■□□□ 1.37
LIMS2-207ENST00000409808 SRP68Q9UHB9 627 aaKnown RBP23.6■■□□□ 1.37
LIMS2-207ENST00000409808 ZSCAN22P10073 491 aaPredicted RBP23.6■■□□□ 1.37
LIMS2-207ENST00000409808 RC3H1Q5TC82 1133 aaKnown RBP23.6■■□□□ 1.37
LIMS2-207ENST00000409808 NEUROD6Q96NK8 337 aa23.6■■□□□ 1.37
LIMS2-207ENST00000409808 TM6SF1Q9BZW5 370 aa23.6■■□□□ 1.37
LIMS2-207ENST00000409808 DIAPH3Q9NSV4 1193 aa23.6■■□□□ 1.37
LIMS2-207ENST00000409808 LRRC4BQ9NT99 713 aa23.6■■□□□ 1.37
LIMS2-207ENST00000409808 SH3TC1Q8TE82 1336 aa23.59■■□□□ 1.37
LIMS2-207ENST00000409808 RPS6KA4O75676 772 aa23.59■■□□□ 1.37
LIMS2-207ENST00000409808 TRIM37O94972 964 aa23.59■■□□□ 1.37
LIMS2-207ENST00000409808 BICDL1Q6ZP65 573 aa23.59■■□□□ 1.37
LIMS2-207ENST00000409808 KCNB2Q92953 911 aa23.59■■□□□ 1.37
LIMS2-207ENST00000409808 ZSCAN31Q96LW9 406 aaPredicted RBP23.59■■□□□ 1.37
LIMS2-207ENST00000409808 AK2P54819 239 aa23.59■■□□□ 1.37
LIMS2-207ENST00000409808 CSPP1Q1MSJ5 1256 aa23.59■■□□□ 1.37
LIMS2-207ENST00000409808 NDUFB9Q9Y6M9 179 aa23.59■■□□□ 1.37
LIMS2-207ENST00000409808 RPAP1Q9BWH6 1393 aaPredicted RBP23.58■■□□□ 1.37
LIMS2-207ENST00000409808 CIAO1O76071 339 aa23.58■■□□□ 1.37
LIMS2-207ENST00000409808 PDIA4P13667 645 aaKnown RBP23.58■■□□□ 1.37
LIMS2-207ENST00000409808 CWC27Q6UX04 472 aaKnown RBP23.58■■□□□ 1.37
LIMS2-207ENST00000409808 ZNF652Q9Y2D9 606 aa23.58■■□□□ 1.37
LIMS2-207ENST00000409808 NTSR2O95665 410 aa23.58■■□□□ 1.36
LIMS2-207ENST00000409808 PARP10Q53GL7 1025 aa23.58■■□□□ 1.36
LIMS2-207ENST00000409808 USPL1Q5W0Q7 1092 aa23.58■■□□□ 1.36
LIMS2-207ENST00000409808 FAM196AQ6ZSG2 479 aa23.58■■□□□ 1.36
LIMS2-207ENST00000409808 EDC3Q96F86 508 aaKnown RBP23.58■■□□□ 1.36
LIMS2-207ENST00000409808 BCL2L12Q9HB09 334 aa23.58■■□□□ 1.36
LIMS2-207ENST00000409808 HSP90AA2PQ14568 343 aaPredicted RBP23.57■■□□□ 1.36
LIMS2-207ENST00000409808 VPS53Q5VIR6 699 aa23.57■■□□□ 1.36
LIMS2-207ENST00000409808 RASEFQ8IZ41 740 aa23.57■■□□□ 1.36
LIMS2-207ENST00000409808 HIP1O00291 1037 aa23.56■■□□□ 1.36
LIMS2-207ENST00000409808 STX6O43752 255 aa23.56■■□□□ 1.36
LIMS2-207ENST00000409808 RUFY3Q7L099 469 aa23.56■■□□□ 1.36
LIMS2-207ENST00000409808 EVI5LQ96CN4 794 aa23.56■■□□□ 1.36
LIMS2-207ENST00000409808 SH2B1Q9NRF2 756 aaPredicted RBP23.56■■□□□ 1.36
LIMS2-207ENST00000409808 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.56■■□□□ 1.36
LIMS2-207ENST00000409808 SMC3Q9UQE7 1217 aa23.56■■□□□ 1.36
LIMS2-207ENST00000409808 TBC1D9BQ66K14 1250 aa23.56■■□□□ 1.36
LIMS2-207ENST00000409808 CLEC4GQ6UXB4 293 aa23.56■■□□□ 1.36
LIMS2-207ENST00000409808 RTCBQ9Y3I0 505 aaKnown RBP23.56■■□□□ 1.36
LIMS2-207ENST00000409808 ANKRD18BA2A2Z9 1011 aa23.55■■□□□ 1.36
LIMS2-207ENST00000409808 CCDC183Q5T5S1 534 aa23.55■■□□□ 1.36
LIMS2-207ENST00000409808 CEP126Q9P2H0 1117 aa23.55■■□□□ 1.36
LIMS2-207ENST00000409808 DDX60Q8IY21 1712 aaKnown RBP23.55■■□□□ 1.36
LIMS2-207ENST00000409808 RBM6P78332 1123 aaKnown RBP23.55■■□□□ 1.36
LIMS2-207ENST00000409808 ZNF772Q68DY9 489 aaPredicted RBP23.55■■□□□ 1.36
LIMS2-207ENST00000409808 LDHAL6AQ6ZMR3 332 aa23.55■■□□□ 1.36
LIMS2-207ENST00000409808 GADD45BO75293 160 aaPredicted RBP23.54■■□□□ 1.36
LIMS2-207ENST00000409808 UBE2HP62256 183 aa23.54■■□□□ 1.36
LIMS2-207ENST00000409808 ARHGEF1Q92888 912 aaKnown RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms