RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 A0A1B0GTH6 734 aa9.04□□□□□ -0.96
LSM5-203ENST00000409782 SCAMP3O14828 347 aaKnown RBP9.04□□□□□ -0.96
LSM5-203ENST00000409782 HSPA2P54652 639 aa9.04□□□□□ -0.96
LSM5-203ENST00000409782 SF3A1Q15459 793 aaKnown RBP9.04□□□□□ -0.96
LSM5-203ENST00000409782 C16orf46Q6P387 395 aa9.04□□□□□ -0.96
LSM5-203ENST00000409782 TREML4Q6UXN2 200 aa9.04□□□□□ -0.96
LSM5-203ENST00000409782 RIPOR1Q6ZS17 1223 aa9.04□□□□□ -0.96
LSM5-203ENST00000409782 IRF7Q92985 503 aa9.04□□□□□ -0.96
LSM5-203ENST00000409782 IQSEC3Q9UPP2 1182 aaPredicted RBP9.04□□□□□ -0.96
LSM5-203ENST00000409782 CHMP3Q9Y3E7 222 aa9.04□□□□□ -0.96
LSM5-203ENST00000409782 CEP170BQ9Y4F5 1589 aaPredicted RBP9.03□□□□□ -0.96
LSM5-203ENST00000409782 ATAD2Q6PL18 1390 aa9.03□□□□□ -0.96
LSM5-203ENST00000409782 ANKRD30AQ9BXX3 1397 aa9.03□□□□□ -0.96
LSM5-203ENST00000409782 DEPDC5O75140 1603 aa9.03□□□□□ -0.96
LSM5-203ENST00000409782 F11P03951 625 aa9.03□□□□□ -0.96
LSM5-203ENST00000409782 PLA2G4AP47712 749 aa9.03□□□□□ -0.96
LSM5-203ENST00000409782 FOXK2Q01167 660 aa9.03□□□□□ -0.96
LSM5-203ENST00000409782 NFX1Q12986 1120 aaKnown RBP9.03□□□□□ -0.96
LSM5-203ENST00000409782 DSC3Q14574 896 aa9.03□□□□□ -0.96
LSM5-203ENST00000409782 SLC9A9Q8IVB4 645 aa9.03□□□□□ -0.96
LSM5-203ENST00000409782 SCG3Q8WXD2 468 aaKnown RBP9.03□□□□□ -0.96
LSM5-203ENST00000409782 VTI1AQ96AJ9 217 aa9.03□□□□□ -0.96
LSM5-203ENST00000409782 AIDAQ96BJ3 306 aa9.03□□□□□ -0.96
LSM5-203ENST00000409782 ALKBH8Q96BT7 664 aaKnown RBP9.03□□□□□ -0.96
LSM5-203ENST00000409782 PUS7Q96PZ0 661 aaKnown RBP9.03□□□□□ -0.96
LSM5-203ENST00000409782 BRPF3Q9ULD4 1205 aa9.03□□□□□ -0.96
LSM5-203ENST00000409782 NCOA1Q15788 1441 aa9.03□□□□□ -0.96
LSM5-203ENST00000409782 PLA2R1Q13018 1463 aa9.02□□□□□ -0.96
LSM5-203ENST00000409782 H7C1W4 665 aa9.02□□□□□ -0.97
LSM5-203ENST00000409782 LGR5O75473 907 aa9.02□□□□□ -0.97
LSM5-203ENST00000409782 MPSTP25325 297 aa9.02□□□□□ -0.97
LSM5-203ENST00000409782 NAA30Q147X3 362 aaPredicted RBP9.02□□□□□ -0.97
LSM5-203ENST00000409782 NBPF1Q3BBV0 1214 aa9.02□□□□□ -0.97
LSM5-203ENST00000409782 POTEAQ6S8J7 498 aa9.02□□□□□ -0.97
LSM5-203ENST00000409782 A2ML1A8K2U0 1454 aa9.02□□□□□ -0.97
LSM5-203ENST00000409782 TNRQ92752 1358 aa9.01□□□□□ -0.97
LSM5-203ENST00000409782 PRPF40AO75400 957 aaKnown RBP9.01□□□□□ -0.97
LSM5-203ENST00000409782 IGHA2P01877 340 aa9.01□□□□□ -0.97
LSM5-203ENST00000409782 TSNAXIP1Q2TAA8 658 aa9.01□□□□□ -0.97
LSM5-203ENST00000409782 TBCELQ5QJ74 424 aa9.01□□□□□ -0.97
LSM5-203ENST00000409782 PGBD3Q8N328 593 aa9.01□□□□□ -0.97
LSM5-203ENST00000409782 UBXN4Q92575 508 aa9.01□□□□□ -0.97
LSM5-203ENST00000409782 MYO19Q96H55 970 aa9.01□□□□□ -0.97
LSM5-203ENST00000409782 GMCL1Q96IK5 515 aa9.01□□□□□ -0.97
LSM5-203ENST00000409782 FAM129BQ96TA1 746 aa9.01□□□□□ -0.97
LSM5-203ENST00000409782 TSPAN10Q9H1Z9 355 aaPredicted RBP9.01□□□□□ -0.97
LSM5-203ENST00000409782 ZNF232Q9UNY5 417 aa9.01□□□□□ -0.97
LSM5-203ENST00000409782 USP3Q9Y6I4 520 aa9.01□□□□□ -0.97
LSM5-203ENST00000409782 STRCQ7RTU9 1775 aa9.01□□□□□ -0.97
LSM5-203ENST00000409782 CAMSAP1Q5T5Y3 1602 aa9.01□□□□□ -0.97
LSM5-203ENST00000409782 NLRP1Q9C000 1473 aa9.01□□□□□ -0.97
LSM5-203ENST00000409782 WASHC2CQ9Y4E1 1318 aa9.01□□□□□ -0.97
LSM5-203ENST00000409782 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9□□□□□ -0.97
LSM5-203ENST00000409782 SPATA31D1Q6ZQQ2 1576 aa9□□□□□ -0.97
LSM5-203ENST00000409782 PTPRTO14522 1441 aa9□□□□□ -0.97
LSM5-203ENST00000409782 CDC14CA4D256 554 aa9□□□□□ -0.97
LSM5-203ENST00000409782 CANXP27824 592 aaKnown RBP9□□□□□ -0.97
LSM5-203ENST00000409782 PSMA6P60900 246 aaKnown RBP9□□□□□ -0.97
LSM5-203ENST00000409782 PDE3BQ13370 1112 aa9□□□□□ -0.97
LSM5-203ENST00000409782 TEAD4Q15561 434 aa9□□□□□ -0.97
LSM5-203ENST00000409782 NAALADL2Q58DX5 795 aa9□□□□□ -0.97
LSM5-203ENST00000409782 BACH2Q9BYV9 841 aa9□□□□□ -0.97
LSM5-203ENST00000409782 GPAMQ9HCL2 828 aa9□□□□□ -0.97
LSM5-203ENST00000409782 ERVK-7P63135 1459 aa9□□□□□ -0.97
LSM5-203ENST00000409782 LMTK2Q8IWU2 1503 aa9□□□□□ -0.97
LSM5-203ENST00000409782 VWDEQ8N2E2 1590 aa8.99□□□□□ -0.97
LSM5-203ENST00000409782 ARHGAP31Q2M1Z3 1444 aa8.99□□□□□ -0.97
LSM5-203ENST00000409782 SERTM1A2A2V5 107 aa8.99□□□□□ -0.97
LSM5-203ENST00000409782 PPP1R12BO60237 982 aaPredicted RBP8.99□□□□□ -0.97
LSM5-203ENST00000409782 HSP90B1P14625 803 aaKnown RBP8.99□□□□□ -0.97
LSM5-203ENST00000409782 TATP17735 454 aaPredicted RBP8.99□□□□□ -0.97
LSM5-203ENST00000409782 MSX1P28360 303 aa8.99□□□□□ -0.97
LSM5-203ENST00000409782 NOS2P35228 1153 aa8.99□□□□□ -0.97
LSM5-203ENST00000409782 SV2AQ7L0J3 742 aa8.99□□□□□ -0.97
LSM5-203ENST00000409782 TRIM22Q8IYM9 498 aa8.99□□□□□ -0.97
LSM5-203ENST00000409782 VWA5B2Q8N398 1253 aa8.99□□□□□ -0.97
LSM5-203ENST00000409782 ABTB2Q8N961 1025 aa8.99□□□□□ -0.97
LSM5-203ENST00000409782 NANOS1Q8WY41 292 aaKnown RBP8.99□□□□□ -0.97
LSM5-203ENST00000409782 L3MBTL2Q969R5 705 aa8.99□□□□□ -0.97
LSM5-203ENST00000409782 C2orf49Q9BVC5 232 aaPredicted RBP8.99□□□□□ -0.97
LSM5-203ENST00000409782 METTL5Q9NRN9 209 aaKnown RBP8.99□□□□□ -0.97
LSM5-203ENST00000409782 STIM2Q9P246 746 aa8.99□□□□□ -0.97
LSM5-203ENST00000409782 PARP3Q9Y6F1 533 aa8.99□□□□□ -0.97
LSM5-203ENST00000409782 CEP152O94986 1710 aa8.99□□□□□ -0.97
LSM5-203ENST00000409782 TNFRSF10BO14763 440 aa8.98□□□□□ -0.97
LSM5-203ENST00000409782 FZD6O60353 706 aa8.98□□□□□ -0.97
LSM5-203ENST00000409782 VSIG8P0DPA2 414 aa8.98□□□□□ -0.97
LSM5-203ENST00000409782 EIF1AXP47813 144 aaKnown RBP8.98□□□□□ -0.97
LSM5-203ENST00000409782 FAM50AQ14320 339 aaKnown RBP8.98□□□□□ -0.97
LSM5-203ENST00000409782 LDLRAD1Q5T700 205 aa8.98□□□□□ -0.97
LSM5-203ENST00000409782 FOXR1Q6PIV2 292 aa8.98□□□□□ -0.97
LSM5-203ENST00000409782 TMC4Q7Z404 712 aa8.98□□□□□ -0.97
LSM5-203ENST00000409782 ZNF295-AS1Q8N0V1 137 aa8.98□□□□□ -0.97
LSM5-203ENST00000409782 RRP7BPQ9NSQ0 103 aa8.98□□□□□ -0.97
LSM5-203ENST00000409782 ZDHHC3Q9NYG2 299 aa8.98□□□□□ -0.97
LSM5-203ENST00000409782 ROCK1Q13464 1354 aa8.98□□□□□ -0.97
LSM5-203ENST00000409782 KANK1Q14678 1352 aa8.98□□□□□ -0.97
LSM5-203ENST00000409782 ANKRD50Q9ULJ7 1429 aa8.97□□□□□ -0.97
LSM5-203ENST00000409782 ERCC5P28715 1186 aaPredicted RBP8.97□□□□□ -0.97
LSM5-203ENST00000409782 HIRAP54198 1017 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms