RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 C4orf50Q6ZRC1 276 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 KIF21BO75037 1637 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 LRRC45Q96CN5 670 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 STK32BQ9NY57 414 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 MCM7P33993 719 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 PPP1R21Q6ZMI0 780 aa9.61□□□□□ -0.87
SCN9A-203ENST00000409672 ERCC3P19447 782 aa9.6□□□□□ -0.87
SCN9A-203ENST00000409672 SMARCA4P51532 1647 aa9.6□□□□□ -0.87
SCN9A-203ENST00000409672 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.6□□□□□ -0.87
SCN9A-203ENST00000409672 MARCKSP29966 332 aaPredicted RBP9.6□□□□□ -0.87
SCN9A-203ENST00000409672 PAFAH1B1P43034 410 aa9.6□□□□□ -0.87
SCN9A-203ENST00000409672 TNNI2P48788 182 aa9.6□□□□□ -0.87
SCN9A-203ENST00000409672 PPP4R4Q6NUP7 873 aa9.6□□□□□ -0.87
SCN9A-203ENST00000409672 FAM200AQ8TCP9 573 aa9.6□□□□□ -0.87
SCN9A-203ENST00000409672 PAGR1Q9BTK6 254 aa9.6□□□□□ -0.87
SCN9A-203ENST00000409672 IMPG2Q9BZV3 1241 aa9.6□□□□□ -0.87
SCN9A-203ENST00000409672 PPANQ9NQ55 473 aaKnown RBP9.6□□□□□ -0.87
SCN9A-203ENST00000409672 SNX16P57768 344 aa9.6□□□□□ -0.87
SCN9A-203ENST00000409672 DCAF17Q5H9S7 520 aaPredicted RBP9.6□□□□□ -0.87
SCN9A-203ENST00000409672 MAK16Q9BXY0 300 aaKnown RBP9.6□□□□□ -0.87
SCN9A-203ENST00000409672 UAP1Q16222 522 aaPredicted RBP9.6□□□□□ -0.87
SCN9A-203ENST00000409672 IVNS1ABPQ9Y6Y0 642 aa9.6□□□□□ -0.87
SCN9A-203ENST00000409672 PPP1R12AO14974 1030 aaPredicted RBP9.6□□□□□ -0.87
SCN9A-203ENST00000409672 GJB2P29033 226 aa9.6□□□□□ -0.87
SCN9A-203ENST00000409672 TRAPPC3LQ5T215 181 aa9.6□□□□□ -0.87
SCN9A-203ENST00000409672 TAOK3Q9H2K8 898 aa9.6□□□□□ -0.87
SCN9A-203ENST00000409672 ANKRD30BQ9BXX2 1392 aa9.6□□□□□ -0.87
SCN9A-203ENST00000409672 NFATC2IPQ8NCF5 419 aa9.6□□□□□ -0.87
SCN9A-203ENST00000409672 ZSCAN31Q96LW9 406 aaPredicted RBP9.6□□□□□ -0.87
SCN9A-203ENST00000409672 CCDC169A6NNP5 214 aa9.59□□□□□ -0.87
SCN9A-203ENST00000409672 SMCR8Q8TEV9 937 aaPredicted RBP9.59□□□□□ -0.87
SCN9A-203ENST00000409672 CCDC175P0C221 793 aa9.59□□□□□ -0.87
SCN9A-203ENST00000409672 BMS1Q14692 1282 aaKnown RBP9.59□□□□□ -0.87
SCN9A-203ENST00000409672 FLIIQ13045 1269 aa9.59□□□□□ -0.87
SCN9A-203ENST00000409672 CCDC25Q86WR0 208 aa9.59□□□□□ -0.87
SCN9A-203ENST00000409672 XAGE3Q8WTP9 111 aa9.59□□□□□ -0.87
SCN9A-203ENST00000409672 DBF4Q9UBU7 674 aaPredicted RBP9.59□□□□□ -0.87
SCN9A-203ENST00000409672 COPS6Q7L5N1 327 aa9.59□□□□□ -0.87
SCN9A-203ENST00000409672 SMC1BQ8NDV3 1235 aa9.59□□□□□ -0.87
SCN9A-203ENST00000409672 CEP135Q66GS9 1140 aa9.59□□□□□ -0.87
SCN9A-203ENST00000409672 C6orf50Q9HD87 102 aa9.59□□□□□ -0.87
SCN9A-203ENST00000409672 ORC3Q9UBD5 711 aaPredicted RBP9.59□□□□□ -0.87
SCN9A-203ENST00000409672 CLIP2Q9UDT6 1046 aa9.59□□□□□ -0.87
SCN9A-203ENST00000409672 FGD6Q6ZV73 1430 aa9.59□□□□□ -0.87
SCN9A-203ENST00000409672 NCOA2Q15596 1464 aa9.59□□□□□ -0.87
SCN9A-203ENST00000409672 YEATS4O95619 227 aa9.59□□□□□ -0.87
SCN9A-203ENST00000409672 ANKRD13DQ6ZTN6 518 aa9.59□□□□□ -0.87
SCN9A-203ENST00000409672 UBXN4Q92575 508 aa9.59□□□□□ -0.87
SCN9A-203ENST00000409672 CCDC114Q96M63 670 aa9.59□□□□□ -0.87
SCN9A-203ENST00000409672 CCDC160A6NGH7 325 aa9.58□□□□□ -0.88
SCN9A-203ENST00000409672 DAPK3O43293 454 aa9.58□□□□□ -0.88
SCN9A-203ENST00000409672 CRCPO75575 148 aa9.58□□□□□ -0.88
SCN9A-203ENST00000409672 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.58□□□□□ -0.88
SCN9A-203ENST00000409672 GADL1Q6ZQY3 521 aa9.58□□□□□ -0.88
SCN9A-203ENST00000409672 LARGE2Q8N3Y3 721 aa9.58□□□□□ -0.88
SCN9A-203ENST00000409672 BBXQ8WY36 941 aaPredicted RBP9.58□□□□□ -0.88
SCN9A-203ENST00000409672 SNAPC4Q5SXM2 1469 aa9.58□□□□□ -0.88
SCN9A-203ENST00000409672 SLU7O95391 586 aaKnown RBP9.58□□□□□ -0.88
SCN9A-203ENST00000409672 SFPQP23246 707 aaKnown RBP eCLIP9.58□□□□□ -0.88
SCN9A-203ENST00000409672 RRAGBQ5VZM2 374 aa9.58□□□□□ -0.88
SCN9A-203ENST00000409672 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.58□□□□□ -0.88
SCN9A-203ENST00000409672 SNRPA1P09661 255 aaKnown RBP9.58□□□□□ -0.88
SCN9A-203ENST00000409672 ZNF710Q8N1W2 664 aa9.58□□□□□ -0.88
SCN9A-203ENST00000409672 METTL13Q8N6R0 699 aa9.58□□□□□ -0.88
SCN9A-203ENST00000409672 PHAXQ9H814 394 aaKnown RBP9.58□□□□□ -0.88
SCN9A-203ENST00000409672 KLF18A0A0U1RQI7 1052 aa9.58□□□□□ -0.88
SCN9A-203ENST00000409672 KIAA0753Q2KHM9 967 aa9.58□□□□□ -0.88
SCN9A-203ENST00000409672 IQCGQ9H095 443 aaKnown RBP9.58□□□□□ -0.88
SCN9A-203ENST00000409672 UFL1O94874 794 aa9.57□□□□□ -0.88
SCN9A-203ENST00000409672 TCIRG1Q13488 830 aa9.57□□□□□ -0.88
SCN9A-203ENST00000409672 CADPS2Q86UW7 1296 aa9.57□□□□□ -0.88
SCN9A-203ENST00000409672 NCOA7Q8NI08 942 aa9.57□□□□□ -0.88
SCN9A-203ENST00000409672 AGTPBP1Q9UPW5 1226 aa9.57□□□□□ -0.88
SCN9A-203ENST00000409672 CD109Q6YHK3 1445 aa9.57□□□□□ -0.88
SCN9A-203ENST00000409672 PTPN14Q15678 1187 aa9.57□□□□□ -0.88
SCN9A-203ENST00000409672 Q3C1V9 767 aa9.57□□□□□ -0.88
SCN9A-203ENST00000409672 PA2G4Q9UQ80 394 aaKnown RBP9.57□□□□□ -0.88
SCN9A-203ENST00000409672 NYXQ9GZU5 481 aa9.57□□□□□ -0.88
SCN9A-203ENST00000409672 SPDYE16A6NNV3 312 aaPredicted RBP9.57□□□□□ -0.88
SCN9A-203ENST00000409672 SPDYE2Q495Y8 402 aa9.57□□□□□ -0.88
SCN9A-203ENST00000409672 SLC9C2Q5TAH2 1124 aa9.57□□□□□ -0.88
SCN9A-203ENST00000409672 KIFC2Q96AC6 838 aa9.57□□□□□ -0.88
SCN9A-203ENST00000409672 ANO10Q9NW15 660 aa9.57□□□□□ -0.88
SCN9A-203ENST00000409672 TPTE2Q6XPS3 522 aa9.57□□□□□ -0.88
SCN9A-203ENST00000409672 ERMNQ8TAM6 284 aa9.57□□□□□ -0.88
SCN9A-203ENST00000409672 C16orf45Q96MC5 204 aaPredicted RBP9.57□□□□□ -0.88
SCN9A-203ENST00000409672 TXNDC16Q9P2K2 825 aa9.57□□□□□ -0.88
SCN9A-203ENST00000409672 TPD52P55327 224 aaPredicted RBP9.57□□□□□ -0.88
SCN9A-203ENST00000409672 RTN1Q16799 776 aa9.57□□□□□ -0.88
SCN9A-203ENST00000409672 LDHBP07195 334 aaKnown RBP9.57□□□□□ -0.88
SCN9A-203ENST00000409672 ASIC1P78348 528 aa9.57□□□□□ -0.88
SCN9A-203ENST00000409672 RBM17Q96I25 401 aaKnown RBP9.56□□□□□ -0.88
SCN9A-203ENST00000409672 ACEP12821 1306 aa9.56□□□□□ -0.88
SCN9A-203ENST00000409672 KRT19P08727 400 aa9.56□□□□□ -0.88
SCN9A-203ENST00000409672 WDR63Q8IWG1 891 aa9.56□□□□□ -0.88
SCN9A-203ENST00000409672 GRPEL1Q9HAV7 217 aa9.56□□□□□ -0.88
SCN9A-203ENST00000409672 WDR7Q9Y4E6 1490 aa9.56□□□□□ -0.88
SCN9A-203ENST00000409672 H0YIN7 160 aa9.56□□□□□ -0.88
SCN9A-203ENST00000409672 MAP7D1Q3KQU3 841 aa9.56□□□□□ -0.88
SCN9A-203ENST00000409672 RBM27Q9P2N5 1060 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms