RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 NRXN1Q9ULB1 1477 aa13.5□□□□□ -0.25
SNX13-202ENST00000409604 GTF2IP78347 998 aa13.49□□□□□ -0.25
SNX13-202ENST00000409604 CCAR1Q8IX12 1150 aaKnown RBP13.49□□□□□ -0.25
SNX13-202ENST00000409604 ZNF444Q8N0Y2 327 aaPredicted RBP13.49□□□□□ -0.25
SNX13-202ENST00000409604 BRF1Q92994 677 aa13.49□□□□□ -0.25
SNX13-202ENST00000409604 SIGLEC1Q9BZZ2 1709 aa13.49□□□□□ -0.25
SNX13-202ENST00000409604 TSPY2A6NKD2 308 aa13.49□□□□□ -0.25
SNX13-202ENST00000409604 HIBADHP31937 336 aaKnown RBP13.49□□□□□ -0.25
SNX13-202ENST00000409604 SAFBQ15424 915 aaKnown RBP eCLIP13.49□□□□□ -0.25
SNX13-202ENST00000409604 C2CD5Q86YS7 1000 aa13.49□□□□□ -0.25
SNX13-202ENST00000409604 OGFOD1Q8N543 542 aa13.49□□□□□ -0.25
SNX13-202ENST00000409604 GDPD2Q9HCC8 539 aa13.49□□□□□ -0.25
SNX13-202ENST00000409604 K7ELQ4 463 aaPredicted RBP13.49□□□□□ -0.25
SNX13-202ENST00000409604 CYP19A1P11511 503 aaPredicted RBP13.49□□□□□ -0.25
SNX13-202ENST00000409604 SCNN1DP51172 638 aa13.49□□□□□ -0.25
SNX13-202ENST00000409604 ITPK1Q13572 414 aa13.49□□□□□ -0.25
SNX13-202ENST00000409604 DNTTIP2Q5QJE6 756 aaKnown RBP13.49□□□□□ -0.25
SNX13-202ENST00000409604 ARMT1Q9H993 441 aa13.49□□□□□ -0.25
SNX13-202ENST00000409604 MCM9Q9NXL9 1143 aa13.49□□□□□ -0.25
SNX13-202ENST00000409604 EIF6P56537 245 aaKnown RBP13.49□□□□□ -0.25
SNX13-202ENST00000409604 TBC1D9BQ66K14 1250 aa13.49□□□□□ -0.25
SNX13-202ENST00000409604 ZNF526Q8TF50 670 aaPredicted RBP13.49□□□□□ -0.25
SNX13-202ENST00000409604 DEPDC5O75140 1603 aa13.48□□□□□ -0.25
SNX13-202ENST00000409604 ZC3H13Q5T200 1668 aaKnown RBP13.48□□□□□ -0.25
SNX13-202ENST00000409604 MBD4O95243 580 aa13.48□□□□□ -0.25
SNX13-202ENST00000409604 VPS72Q15906 364 aa13.48□□□□□ -0.25
SNX13-202ENST00000409604 HOMER1Q86YM7 354 aa13.48□□□□□ -0.25
SNX13-202ENST00000409604 ESYT1Q9BSJ8 1104 aa13.48□□□□□ -0.25
SNX13-202ENST00000409604 ZNF408Q9H9D4 720 aa13.48□□□□□ -0.25
SNX13-202ENST00000409604 AATFQ9NY61 560 aaKnown RBP eCLIP13.48□□□□□ -0.25
SNX13-202ENST00000409604 DEKP35659 375 aaKnown RBP13.48□□□□□ -0.25
SNX13-202ENST00000409604 KIAA0825Q8IV33 1275 aa13.48□□□□□ -0.25
SNX13-202ENST00000409604 RNF214Q8ND24 703 aa13.48□□□□□ -0.25
SNX13-202ENST00000409604 RBM17Q96I25 401 aaKnown RBP13.48□□□□□ -0.25
SNX13-202ENST00000409604 THRAP3Q9Y2W1 955 aaKnown RBP13.48□□□□□ -0.25
SNX13-202ENST00000409604 LRRC7Q96NW7 1537 aa13.48□□□□□ -0.25
SNX13-202ENST00000409604 UQCRFS1P1P0C7P4 283 aa13.48□□□□□ -0.25
SNX13-202ENST00000409604 PHKA1P46020 1223 aa13.48□□□□□ -0.25
SNX13-202ENST00000409604 CHMP4BP1P59074 171 aa13.48□□□□□ -0.25
SNX13-202ENST00000409604 R3HDM1Q15032 1099 aaKnown RBP13.48□□□□□ -0.25
SNX13-202ENST00000409604 C8orf34Q49A92 452 aa13.48□□□□□ -0.25
SNX13-202ENST00000409604 TBC1D2Q9BYX2 928 aa13.48□□□□□ -0.25
SNX13-202ENST00000409604 TCEAL9Q9UHQ7 104 aa13.48□□□□□ -0.25
SNX13-202ENST00000409604 GGA1Q9UJY5 639 aa13.48□□□□□ -0.25
SNX13-202ENST00000409604 NFKBIBQ15653 356 aa13.47□□□□□ -0.25
SNX13-202ENST00000409604 L1TD1Q5T7N2 865 aaKnown RBP13.47□□□□□ -0.25
SNX13-202ENST00000409604 CDK11BP21127 795 aaKnown RBP13.47□□□□□ -0.25
SNX13-202ENST00000409604 CHRNDQ07001 517 aa13.47□□□□□ -0.25
SNX13-202ENST00000409604 CCDC96Q2M329 555 aa13.47□□□□□ -0.25
SNX13-202ENST00000409604 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.47□□□□□ -0.25
SNX13-202ENST00000409604 LDHBP07195 334 aaKnown RBP13.46□□□□□ -0.25
SNX13-202ENST00000409604 PUM3Q15397 648 aaKnown RBP13.46□□□□□ -0.25
SNX13-202ENST00000409604 GPR162Q16538 588 aa13.46□□□□□ -0.25
SNX13-202ENST00000409604 ZNF804AQ7Z570 1209 aa13.46□□□□□ -0.25
SNX13-202ENST00000409604 MPNDQ8N594 471 aa13.46□□□□□ -0.25
SNX13-202ENST00000409604 ANTXR1Q9H6X2 564 aa13.46□□□□□ -0.25
SNX13-202ENST00000409604 DBNDD1Q9H9R9 158 aa13.46□□□□□ -0.25
SNX13-202ENST00000409604 CHMLP26374 656 aa13.46□□□□□ -0.25
SNX13-202ENST00000409604 KDRP35968 1356 aa13.46□□□□□ -0.25
SNX13-202ENST00000409604 GOLGA8BA8MQT2 603 aa13.46□□□□□ -0.26
SNX13-202ENST00000409604 PCCAP05165 728 aaPredicted RBP13.46□□□□□ -0.26
SNX13-202ENST00000409604 MCMDC2Q4G0Z9 681 aa13.46□□□□□ -0.26
SNX13-202ENST00000409604 SPATA31A5Q5VU36 1347 aa13.46□□□□□ -0.26
SNX13-202ENST00000409604 SPATA31A7Q8IWB4 1347 aa13.46□□□□□ -0.26
SNX13-202ENST00000409604 PPIP5K2O43314 1243 aa13.45□□□□□ -0.26
SNX13-202ENST00000409604 CD163L1Q9NR16 1453 aa13.45□□□□□ -0.26
SNX13-202ENST00000409604 BAG3O95817 575 aa13.45□□□□□ -0.26
SNX13-202ENST00000409604 ARHGAP27Q6ZUM4 889 aa13.45□□□□□ -0.26
SNX13-202ENST00000409604 SSH2Q76I76 1423 aa13.45□□□□□ -0.26
SNX13-202ENST00000409604 SSH3Q8TE77 659 aa13.45□□□□□ -0.26
SNX13-202ENST00000409604 FEZ1Q99689 392 aa13.45□□□□□ -0.26
SNX13-202ENST00000409604 KIF24Q5T7B8 1368 aa13.45□□□□□ -0.26
SNX13-202ENST00000409604 TTF1Q15361 905 aaPredicted RBP13.45□□□□□ -0.26
SNX13-202ENST00000409604 NLGN1Q8N2Q7 840 aa13.45□□□□□ -0.26
SNX13-202ENST00000409604 C3P01024 1663 aa13.45□□□□□ -0.26
SNX13-202ENST00000409604 PPLO60437 1756 aa13.45□□□□□ -0.26
SNX13-202ENST00000409604 TMEM67Q5HYA8 995 aa13.45□□□□□ -0.26
SNX13-202ENST00000409604 MFSD6Q6ZSS7 791 aa13.45□□□□□ -0.26
SNX13-202ENST00000409604 TFIP11Q9UBB9 837 aaKnown RBP13.45□□□□□ -0.26
SNX13-202ENST00000409604 DBNLQ9UJU6 430 aaKnown RBP13.45□□□□□ -0.26
SNX13-202ENST00000409604 MYCNP04198 464 aaPredicted RBP13.44□□□□□ -0.26
SNX13-202ENST00000409604 EZH2Q15910 746 aaKnown RBP13.44□□□□□ -0.26
SNX13-202ENST00000409604 ZYXQ15942 572 aaKnown RBP13.44□□□□□ -0.26
SNX13-202ENST00000409604 NEK1Q96PY6 1258 aa13.44□□□□□ -0.26
SNX13-202ENST00000409604 ATP6V1DQ9Y5K8 247 aa13.44□□□□□ -0.26
SNX13-202ENST00000409604 MAGEB6P1A0A0J9YX57 407 aa13.44□□□□□ -0.26
SNX13-202ENST00000409604 LINC00116Q8NCU8 138 aa13.44□□□□□ -0.26
SNX13-202ENST00000409604 TRIM22Q8IYM9 498 aa13.44□□□□□ -0.26
SNX13-202ENST00000409604 CELF1Q92879 486 aaKnown RBP13.44□□□□□ -0.26
SNX13-202ENST00000409604 C21orf2O43822 256 aa13.43□□□□□ -0.26
SNX13-202ENST00000409604 GSPT1P15170 499 aaKnown RBP13.43□□□□□ -0.26
SNX13-202ENST00000409604 TTLL5Q6EMB2 1281 aa13.43□□□□□ -0.26
SNX13-202ENST00000409604 IQCA1Q86XH1 822 aa13.43□□□□□ -0.26
SNX13-202ENST00000409604 NOC3LQ8WTT2 800 aaKnown RBP13.43□□□□□ -0.26
SNX13-202ENST00000409604 DLC1Q96QB1 1528 aa13.43□□□□□ -0.26
SNX13-202ENST00000409604 RNF113AO15541 343 aaKnown RBP13.43□□□□□ -0.26
SNX13-202ENST00000409604 RPS6KA4O75676 772 aa13.43□□□□□ -0.26
SNX13-202ENST00000409604 LDHCP07864 332 aa13.43□□□□□ -0.26
SNX13-202ENST00000409604 CHRNA5P30532 468 aa13.43□□□□□ -0.26
SNX13-202ENST00000409604 CCDC102BQ68D86 513 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms