RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 NFKBIBQ15653 356 aa8.77□□□□□ -1
SH3D19-203ENST00000409598 TTLL5Q6EMB2 1281 aa8.77□□□□□ -1
SH3D19-203ENST00000409598 METTL22Q9BUU2 404 aaPredicted RBP8.77□□□□□ -1
SH3D19-203ENST00000409598 MROH5Q6ZUA9 1318 aa8.77□□□□□ -1.01
SH3D19-203ENST00000409598 IL1RAPL2Q9NP60 686 aa8.77□□□□□ -1.01
SH3D19-203ENST00000409598 ASAP1Q9ULH1 1129 aa8.77□□□□□ -1.01
SH3D19-203ENST00000409598 STX8Q9UNK0 236 aa8.77□□□□□ -1.01
SH3D19-203ENST00000409598 TTF2Q9UNY4 1162 aaKnown RBP8.77□□□□□ -1.01
SH3D19-203ENST00000409598 SHROOM2Q13796 1616 aa8.77□□□□□ -1.01
SH3D19-203ENST00000409598 PANK1Q8TE04 598 aa8.77□□□□□ -1.01
SH3D19-203ENST00000409598 NARFQ9UHQ1 456 aa8.77□□□□□ -1.01
SH3D19-203ENST00000409598 F6X3S4 739 aa8.77□□□□□ -1.01
SH3D19-203ENST00000409598 JMYQ8N9B5 988 aa8.77□□□□□ -1.01
SH3D19-203ENST00000409598 MTIF3Q9H2K0 278 aaKnown RBP8.77□□□□□ -1.01
SH3D19-203ENST00000409598 PLXNC1O60486 1568 aa8.77□□□□□ -1.01
SH3D19-203ENST00000409598 MFSD6Q6ZSS7 791 aa8.76□□□□□ -1.01
SH3D19-203ENST00000409598 APOBEC3FQ8IUX4 373 aaKnown RBP8.76□□□□□ -1.01
SH3D19-203ENST00000409598 GOPCQ9HD26 462 aa8.76□□□□□ -1.01
SH3D19-203ENST00000409598 MAP3K15Q6ZN16 1313 aa8.76□□□□□ -1.01
SH3D19-203ENST00000409598 UBE2Q2Q8WVN8 375 aa8.76□□□□□ -1.01
SH3D19-203ENST00000409598 ZHX3Q9H4I2 956 aa8.76□□□□□ -1.01
SH3D19-203ENST00000409598 SOS2Q07890 1332 aaPredicted RBP8.76□□□□□ -1.01
SH3D19-203ENST00000409598 ZBTB24O43167 697 aaPredicted RBP8.76□□□□□ -1.01
SH3D19-203ENST00000409598 TPM3P06753 285 aa8.76□□□□□ -1.01
SH3D19-203ENST00000409598 ATP2B1P20020 1258 aa8.76□□□□□ -1.01
SH3D19-203ENST00000409598 UBXN2AP68543 259 aa8.76□□□□□ -1.01
SH3D19-203ENST00000409598 RAB3GAP1Q15042 981 aa8.76□□□□□ -1.01
SH3D19-203ENST00000409598 TMEM266Q2M3C6 531 aa8.76□□□□□ -1.01
SH3D19-203ENST00000409598 BOLA2Q9H3K6 86 aa8.76□□□□□ -1.01
SH3D19-203ENST00000409598 C1orf115Q9H7X2 142 aa8.76□□□□□ -1.01
SH3D19-203ENST00000409598 MCM9Q9NXL9 1143 aa8.76□□□□□ -1.01
SH3D19-203ENST00000409598 ASXL1Q8IXJ9 1541 aa8.76□□□□□ -1.01
SH3D19-203ENST00000409598 VEGFAP15692 232 aaPredicted RBP8.76□□□□□ -1.01
SH3D19-203ENST00000409598 PDCP20941 246 aa8.76□□□□□ -1.01
SH3D19-203ENST00000409598 SAMM50Q9Y512 469 aa8.76□□□□□ -1.01
SH3D19-203ENST00000409598 CFAP65Q6ZU64 1925 aaKnown RBP8.76□□□□□ -1.01
SH3D19-203ENST00000409598 RAD50Q92878 1312 aa8.76□□□□□ -1.01
SH3D19-203ENST00000409598 CDC42BPGQ6DT37 1551 aa8.76□□□□□ -1.01
SH3D19-203ENST00000409598 ERVV-1B6SEH8 477 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 SOCS7O14512 581 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 KIF4AO95239 1232 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 SYCP1Q15431 976 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 JARID2Q92833 1246 aaPredicted RBP8.75□□□□□ -1.01
SH3D19-203ENST00000409598 COA7Q96BR5 231 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 TGFB2P61812 414 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 SREBF2Q12772 1141 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 MFSD14BQ5SR56 506 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 HELBQ8NG08 1087 aaPredicted RBP8.75□□□□□ -1.01
SH3D19-203ENST00000409598 SMARCC2Q8TAQ2 1214 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 CCDC8Q9H0W5 538 aaPredicted RBP8.75□□□□□ -1.01
SH3D19-203ENST00000409598 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.75□□□□□ -1.01
SH3D19-203ENST00000409598 CYP46A1Q9Y6A2 500 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 SLC4A4Q9Y6R1 1079 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 DOK7Q18PE1 504 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 ESR2Q92731 530 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 PDCL3Q9H2J4 239 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 SNRKQ9NRH2 765 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 CARMIL3Q8ND23 1372 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 GOLIM4O00461 696 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 IPO7O95373 1038 aaKnown RBP8.75□□□□□ -1.01
SH3D19-203ENST00000409598 LMNB1P20700 586 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 ELMSAN1Q6PJG2 1045 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 EP400NLQ6ZTU2 488 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 BRIP1Q9BX63 1249 aa8.75□□□□□ -1.01
SH3D19-203ENST00000409598 HMGB1P09429 215 aaKnown RBP8.74□□□□□ -1.01
SH3D19-203ENST00000409598 RC3H1Q5TC82 1133 aaKnown RBP8.74□□□□□ -1.01
SH3D19-203ENST00000409598 NBPF11Q86T75 865 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 KRT23Q9C075 422 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 MADDQ8WXG6 1647 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 SSBP05455 408 aaKnown RBP eCLIP8.74□□□□□ -1.01
SH3D19-203ENST00000409598 PPM1FP49593 454 aaPredicted RBP8.74□□□□□ -1.01
SH3D19-203ENST00000409598 USP14P54578 494 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 SYNE4Q8N205 404 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 CNNM2Q9H8M5 875 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 TAF12Q16514 161 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 KRT26Q7Z3Y9 468 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 DPP9Q86TI2 863 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 DHX37Q8IY37 1157 aaKnown RBP8.74□□□□□ -1.01
SH3D19-203ENST00000409598 CCDC150Q8NCX0 1101 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 SMC1BQ8NDV3 1235 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 PIGBQ92521 554 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 FERMT2Q96AC1 680 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 KCNH4Q9UQ05 1017 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 SLC12A7Q9Y666 1083 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 DIP2CQ9Y2E4 1556 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 USP17L3A6NCW0 530 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 USP17L4A6NCW7 530 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 IFIT3O14879 490 aaKnown RBP8.74□□□□□ -1.01
SH3D19-203ENST00000409598 USP17L1Q7RTZ2 530 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 KIAA0825Q8IV33 1275 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 TMTC2Q8N394 836 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 PAGR1Q9BTK6 254 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 ECHDC1Q9NTX5 307 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 RNF123Q5XPI4 1314 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 RAD17O75943 681 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 USP17L8P0C7I0 530 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 BLOC1S2Q6QNY1 142 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 FAM43AQ8N2R8 423 aa8.74□□□□□ -1.01
SH3D19-203ENST00000409598 LBHD1Q9BQE6 289 aaPredicted RBP8.74□□□□□ -1.01
SH3D19-203ENST00000409598 USP40Q9NVE5 1235 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms