RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 RC3H1Q5TC82 1133 aaKnown RBP10.05□□□□□ -0.8
SH3D19-202ENST00000409252 TBC1D9BQ66K14 1250 aa10.05□□□□□ -0.8
SH3D19-202ENST00000409252 FPGT-TNNI3KV9GXZ4 949 aa10.05□□□□□ -0.8
SH3D19-202ENST00000409252 CAMTA1Q9Y6Y1 1673 aa10.04□□□□□ -0.8
SH3D19-202ENST00000409252 CCDC69A6NI79 296 aa10.04□□□□□ -0.8
SH3D19-202ENST00000409252 FOSBP53539 338 aa10.04□□□□□ -0.8
SH3D19-202ENST00000409252 SKAP1Q86WV1 359 aa10.04□□□□□ -0.8
SH3D19-202ENST00000409252 LPIN2Q92539 896 aa10.04□□□□□ -0.8
SH3D19-202ENST00000409252 PAG1Q9NWQ8 432 aa10.04□□□□□ -0.8
SH3D19-202ENST00000409252 KDM4AO75164 1064 aa10.04□□□□□ -0.8
SH3D19-202ENST00000409252 SPON1Q9HCB6 807 aa10.04□□□□□ -0.8
SH3D19-202ENST00000409252 CYP46A1Q9Y6A2 500 aa10.04□□□□□ -0.8
SH3D19-202ENST00000409252 PDE1AP54750 535 aa10.04□□□□□ -0.8
SH3D19-202ENST00000409252 PICALMQ13492 652 aa10.04□□□□□ -0.8
SH3D19-202ENST00000409252 XAGE2Q96GT9 111 aa10.04□□□□□ -0.8
SH3D19-202ENST00000409252 ZFYP08048 801 aaPredicted RBP10.04□□□□□ -0.8
SH3D19-202ENST00000409252 NEK4P51957 841 aa10.04□□□□□ -0.8
SH3D19-202ENST00000409252 TTC22Q5TAA0 569 aa10.04□□□□□ -0.8
SH3D19-202ENST00000409252 SLC9C2Q5TAH2 1124 aa10.04□□□□□ -0.8
SH3D19-202ENST00000409252 NUP133Q8WUM0 1156 aa10.04□□□□□ -0.8
SH3D19-202ENST00000409252 U3KPZ7 1027 aaPredicted RBP10.04□□□□□ -0.8
SH3D19-202ENST00000409252 DALRD3Q5D0E6 543 aaKnown RBP10.03□□□□□ -0.8
SH3D19-202ENST00000409252 SMC3Q9UQE7 1217 aa10.03□□□□□ -0.8
SH3D19-202ENST00000409252 TTC41PQ6P2S7 1318 aa10.03□□□□□ -0.8
SH3D19-202ENST00000409252 NBPF26B4DH59 902 aa10.03□□□□□ -0.8
SH3D19-202ENST00000409252 ATP2B4P23634 1241 aa10.03□□□□□ -0.8
SH3D19-202ENST00000409252 KRT32Q14532 448 aa10.03□□□□□ -0.8
SH3D19-202ENST00000409252 SF3A1Q15459 793 aaKnown RBP10.03□□□□□ -0.8
SH3D19-202ENST00000409252 SLC15A2Q16348 729 aa10.03□□□□□ -0.8
SH3D19-202ENST00000409252 NBPF10Q6P3W6 841 aaKnown RBP10.03□□□□□ -0.8
SH3D19-202ENST00000409252 ZNF444Q8N0Y2 327 aaPredicted RBP10.03□□□□□ -0.8
SH3D19-202ENST00000409252 NBPF15Q8N660 670 aa10.03□□□□□ -0.8
SH3D19-202ENST00000409252 GBP4Q96PP9 640 aa10.03□□□□□ -0.8
SH3D19-202ENST00000409252 DBNDD2Q9BQY9 259 aa10.03□□□□□ -0.8
SH3D19-202ENST00000409252 NPR1P16066 1061 aa10.02□□□□□ -0.8
SH3D19-202ENST00000409252 BLOC1S2Q6QNY1 142 aa10.02□□□□□ -0.8
SH3D19-202ENST00000409252 JAKMIP1Q96N16 626 aaKnown RBP10.02□□□□□ -0.8
SH3D19-202ENST00000409252 CNTNAP4Q9C0A0 1308 aa10.02□□□□□ -0.8
SH3D19-202ENST00000409252 MON2Q7Z3U7 1717 aa10.02□□□□□ -0.8
SH3D19-202ENST00000409252 PRPF40BQ6NWY9 871 aaKnown RBP10.02□□□□□ -0.81
SH3D19-202ENST00000409252 CEMIPQ8WUJ3 1361 aa10.02□□□□□ -0.81
SH3D19-202ENST00000409252 ZNF213O14771 459 aa10.02□□□□□ -0.81
SH3D19-202ENST00000409252 RANBP6O60518 1105 aaKnown RBP10.02□□□□□ -0.81
SH3D19-202ENST00000409252 SAFBQ15424 915 aaKnown RBP eCLIP10.02□□□□□ -0.81
SH3D19-202ENST00000409252 POTEAQ6S8J7 498 aa10.02□□□□□ -0.81
SH3D19-202ENST00000409252 TMC4Q7Z404 712 aa10.02□□□□□ -0.81
SH3D19-202ENST00000409252 MAGEB6Q8N7X4 407 aa10.02□□□□□ -0.81
SH3D19-202ENST00000409252 SEC31BQ9NQW1 1179 aa10.02□□□□□ -0.81
SH3D19-202ENST00000409252 PIK3C2AO00443 1686 aa10.02□□□□□ -0.81
SH3D19-202ENST00000409252 SLIT3O75094 1523 aa10.02□□□□□ -0.81
SH3D19-202ENST00000409252 XBP1P17861 261 aa10.02□□□□□ -0.81
SH3D19-202ENST00000409252 CHRNDQ07001 517 aa10.02□□□□□ -0.81
SH3D19-202ENST00000409252 NFIXQ14938 502 aa10.02□□□□□ -0.81
SH3D19-202ENST00000409252 RNF41Q9H4P4 317 aaPredicted RBP10.02□□□□□ -0.81
SH3D19-202ENST00000409252 COL3A1P02461 1466 aaPredicted RBP10.02□□□□□ -0.81
SH3D19-202ENST00000409252 NF2P35240 595 aa10.01□□□□□ -0.81
SH3D19-202ENST00000409252 MASTLQ96GX5 879 aa10.01□□□□□ -0.81
SH3D19-202ENST00000409252 ANP32EQ9BTT0 268 aa10.01□□□□□ -0.81
SH3D19-202ENST00000409252 MAGEB6P1A0A0J9YX57 407 aa10.01□□□□□ -0.81
SH3D19-202ENST00000409252 WDHD1O75717 1129 aaPredicted RBP10.01□□□□□ -0.81
SH3D19-202ENST00000409252 TTLL6Q8N841 843 aa10.01□□□□□ -0.81
SH3D19-202ENST00000409252 SLC4A4Q9Y6R1 1079 aa10.01□□□□□ -0.81
SH3D19-202ENST00000409252 XDHP47989 1333 aa10.01□□□□□ -0.81
SH3D19-202ENST00000409252 RNF123Q5XPI4 1314 aa10.01□□□□□ -0.81
SH3D19-202ENST00000409252 RGPD8O14715 1765 aaPredicted RBP10.01□□□□□ -0.81
SH3D19-202ENST00000409252 BBOX1O75936 387 aa10.01□□□□□ -0.81
SH3D19-202ENST00000409252 CLSTN1O94985 981 aa10.01□□□□□ -0.81
SH3D19-202ENST00000409252 PLCG2P16885 1265 aa10.01□□□□□ -0.81
SH3D19-202ENST00000409252 BRPF1P55201 1214 aaPredicted RBP10.01□□□□□ -0.81
SH3D19-202ENST00000409252 CCDC93Q567U6 631 aa10.01□□□□□ -0.81
SH3D19-202ENST00000409252 MIGA1Q8NAN2 632 aa10.01□□□□□ -0.81
SH3D19-202ENST00000409252 BRMS1Q9HCU9 246 aa10.01□□□□□ -0.81
SH3D19-202ENST00000409252 PIM2Q9P1W9 311 aa10.01□□□□□ -0.81
SH3D19-202ENST00000409252 MAST3O60307 1309 aa10.01□□□□□ -0.81
SH3D19-202ENST00000409252 KDM6AO15550 1401 aaPredicted RBP10.01□□□□□ -0.81
SH3D19-202ENST00000409252 RABEP1Q15276 862 aa10.01□□□□□ -0.81
SH3D19-202ENST00000409252 WDR66Q8TBY9 1149 aa10.01□□□□□ -0.81
SH3D19-202ENST00000409252 FEZ1Q99689 392 aa10.01□□□□□ -0.81
SH3D19-202ENST00000409252 VPS37CA5D8V6 355 aaPredicted RBP10□□□□□ -0.81
SH3D19-202ENST00000409252 EIF5P55010 431 aaKnown RBP10□□□□□ -0.81
SH3D19-202ENST00000409252 CABP5Q9NP86 173 aa10□□□□□ -0.81
SH3D19-202ENST00000409252 DOK7Q18PE1 504 aa10□□□□□ -0.81
SH3D19-202ENST00000409252 LRRC24Q50LG9 513 aa10□□□□□ -0.81
SH3D19-202ENST00000409252 BMP2KLQ5H9B9 411 aa10□□□□□ -0.81
SH3D19-202ENST00000409252 PDE4BQ07343 736 aa10□□□□□ -0.81
SH3D19-202ENST00000409252 GRAPQ13588 217 aa10□□□□□ -0.81
SH3D19-202ENST00000409252 CSPP1Q1MSJ5 1256 aa10□□□□□ -0.81
SH3D19-202ENST00000409252 GRAPLQ8TC17 118 aaPredicted RBP10□□□□□ -0.81
SH3D19-202ENST00000409252 CCDC34Q96HJ3 373 aa10□□□□□ -0.81
SH3D19-202ENST00000409252 STK3Q13188 491 aa10□□□□□ -0.81
SH3D19-202ENST00000409252 ANKRD1Q15327 319 aa10□□□□□ -0.81
SH3D19-202ENST00000409252 ZNF804BA4D1E1 1349 aa9.99□□□□□ -0.81
SH3D19-202ENST00000409252 GTF2IP78347 998 aa9.99□□□□□ -0.81
SH3D19-202ENST00000409252 FOXD4L6Q3SYB3 417 aaPredicted RBP9.99□□□□□ -0.81
SH3D19-202ENST00000409252 DPY19L2Q6NUT2 758 aa9.99□□□□□ -0.81
SH3D19-202ENST00000409252 FOXD4L3Q6VB84 417 aaPredicted RBP9.99□□□□□ -0.81
SH3D19-202ENST00000409252 IQCA1Q86XH1 822 aa9.99□□□□□ -0.81
SH3D19-202ENST00000409252 TNNI2P48788 182 aa9.99□□□□□ -0.81
SH3D19-202ENST00000409252 HAND2P61296 217 aa9.99□□□□□ -0.81
SH3D19-202ENST00000409252 GRM1Q13255 1194 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms