RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.25□□□□□ -0.45
PBRM1-205ENST00000409057 V9GYY5 206 aaPredicted RBP12.25□□□□□ -0.45
PBRM1-205ENST00000409057 UHRF1BP1LA0JNW5 1464 aa12.25□□□□□ -0.45
PBRM1-205ENST00000409057 CYLC1P35663 651 aaPredicted RBP12.25□□□□□ -0.45
PBRM1-205ENST00000409057 MPHOSPH10O00566 681 aaKnown RBP12.24□□□□□ -0.45
PBRM1-205ENST00000409057 HSF2BPO75031 334 aa12.24□□□□□ -0.45
PBRM1-205ENST00000409057 ZFYP08048 801 aaPredicted RBP12.24□□□□□ -0.45
PBRM1-205ENST00000409057 MATR3P43243 847 aaKnown RBP eCLIP12.24□□□□□ -0.45
PBRM1-205ENST00000409057 LINS1Q8NG48 757 aa12.24□□□□□ -0.45
PBRM1-205ENST00000409057 LRRC2Q9BYS8 371 aa12.24□□□□□ -0.45
PBRM1-205ENST00000409057 IDEP14735 1019 aa12.24□□□□□ -0.45
PBRM1-205ENST00000409057 TRIM21P19474 475 aaKnown RBP12.24□□□□□ -0.45
PBRM1-205ENST00000409057 AK2P54819 239 aa12.24□□□□□ -0.45
PBRM1-205ENST00000409057 CCDC40Q4G0X9 1142 aa12.24□□□□□ -0.45
PBRM1-205ENST00000409057 MFSD6Q6ZSS7 791 aa12.24□□□□□ -0.45
PBRM1-205ENST00000409057 GOLGA1Q92805 767 aa12.24□□□□□ -0.45
PBRM1-205ENST00000409057 CDC5LQ99459 802 aaKnown RBP12.24□□□□□ -0.45
PBRM1-205ENST00000409057 KIF5BP33176 963 aa12.24□□□□□ -0.45
PBRM1-205ENST00000409057 LMBR1LQ6UX01 489 aa12.23□□□□□ -0.45
PBRM1-205ENST00000409057 GIGYF2Q6Y7W6 1299 aaKnown RBP12.23□□□□□ -0.45
PBRM1-205ENST00000409057 CRACR2BQ8N4Y2 399 aaPredicted RBP12.23□□□□□ -0.45
PBRM1-205ENST00000409057 TRIM47Q96LD4 638 aa12.23□□□□□ -0.45
PBRM1-205ENST00000409057 UBA5Q9GZZ9 404 aa12.23□□□□□ -0.45
PBRM1-205ENST00000409057 RSPH14Q9UHP6 348 aa12.23□□□□□ -0.45
PBRM1-205ENST00000409057 LMOD1P29536 600 aaPredicted RBP12.23□□□□□ -0.45
PBRM1-205ENST00000409057 SLC39A6Q13433 755 aa12.23□□□□□ -0.45
PBRM1-205ENST00000409057 AKAP4Q5JQC9 854 aa12.23□□□□□ -0.45
PBRM1-205ENST00000409057 SMAP1Q8IYB5 467 aaPredicted RBP12.23□□□□□ -0.45
PBRM1-205ENST00000409057 GPATCH11Q8N954 259 aa12.23□□□□□ -0.45
PBRM1-205ENST00000409057 ALG1Q9BT22 464 aa12.23□□□□□ -0.45
PBRM1-205ENST00000409057 RBSNQ9H1K0 784 aa12.23□□□□□ -0.45
PBRM1-205ENST00000409057 FLT4P35916 1363 aa12.23□□□□□ -0.45
PBRM1-205ENST00000409057 COL17A1Q9UMD9 1497 aaPredicted RBP12.23□□□□□ -0.45
PBRM1-205ENST00000409057 NOP2P46087 812 aaKnown RBP12.23□□□□□ -0.45
PBRM1-205ENST00000409057 Q6ZUG5 572 aa12.23□□□□□ -0.45
PBRM1-205ENST00000409057 UQCRFS1P1P0C7P4 283 aa12.23□□□□□ -0.45
PBRM1-205ENST00000409057 PIP4K2BP78356 416 aa12.23□□□□□ -0.45
PBRM1-205ENST00000409057 MCMDC2Q4G0Z9 681 aa12.23□□□□□ -0.45
PBRM1-205ENST00000409057 TTC41PQ6P2S7 1318 aa12.23□□□□□ -0.45
PBRM1-205ENST00000409057 A0A1W2PP64 1363 aa12.23□□□□□ -0.45
PBRM1-205ENST00000409057 NPATQ14207 1427 aa12.23□□□□□ -0.45
PBRM1-205ENST00000409057 SPTLC2O15270 562 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 ZBTB43O43298 467 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 TUBBP07437 444 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 CAPN2P17655 700 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 TERF1P54274 439 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 PAF1Q8N7H5 531 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 RNF216Q9NWF9 866 aaPredicted RBP12.22□□□□□ -0.45
PBRM1-205ENST00000409057 PA2G4Q9UQ80 394 aaKnown RBP12.22□□□□□ -0.45
PBRM1-205ENST00000409057 CTAGE9A4FU28 777 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 CADPS2Q86UW7 1296 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.22□□□□□ -0.45
PBRM1-205ENST00000409057 RTL1A6NKG5 1358 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 ZNF518AQ6AHZ1 1483 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 ASXL2Q76L83 1435 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 RIMS2Q9UQ26 1411 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 NBPF7P0C2Y1 421 aaPredicted RBP12.22□□□□□ -0.45
PBRM1-205ENST00000409057 CETN1Q12798 172 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 TICAM2Q86XR7 235 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 PPP1R1BQ9UD71 204 aaPredicted RBP12.22□□□□□ -0.45
PBRM1-205ENST00000409057 PZPP20742 1482 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 SHANK2Q9UPX8 1470 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 ZFYVE9O95405 1425 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 KDM2BQ8NHM5 1336 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 ADAMTS2O95450 1211 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 IFI16Q16666 785 aaKnown RBP12.22□□□□□ -0.45
PBRM1-205ENST00000409057 RRAGBQ5VZM2 374 aa12.22□□□□□ -0.45
PBRM1-205ENST00000409057 IL15P40933 162 aaPredicted RBP12.21□□□□□ -0.45
PBRM1-205ENST00000409057 ATP2B3Q16720 1220 aa12.21□□□□□ -0.45
PBRM1-205ENST00000409057 CCDC96Q2M329 555 aa12.21□□□□□ -0.45
PBRM1-205ENST00000409057 NPC1L1Q9UHC9 1359 aa12.21□□□□□ -0.45
PBRM1-205ENST00000409057 CFAP43Q8NDM7 1665 aa12.21□□□□□ -0.45
PBRM1-205ENST00000409057 TSPY2A6NKD2 308 aa12.21□□□□□ -0.45
PBRM1-205ENST00000409057 OPA1O60313 960 aa12.21□□□□□ -0.45
PBRM1-205ENST00000409057 CHMLP26374 656 aa12.21□□□□□ -0.45
PBRM1-205ENST00000409057 ZNF445P59923 1031 aa12.21□□□□□ -0.45
PBRM1-205ENST00000409057 LRRC27Q9C0I9 530 aa12.21□□□□□ -0.45
PBRM1-205ENST00000409057 MYO1BO43795 1136 aa12.21□□□□□ -0.45
PBRM1-205ENST00000409057 TNIP1Q15025 636 aa12.21□□□□□ -0.45
PBRM1-205ENST00000409057 HSP90AA4PQ58FG1 418 aa12.21□□□□□ -0.45
PBRM1-205ENST00000409057 TMTC2Q8N394 836 aa12.21□□□□□ -0.45
PBRM1-205ENST00000409057 WDR62O43379 1518 aa12.21□□□□□ -0.45
PBRM1-205ENST00000409057 SOS1Q07889 1333 aaPredicted RBP12.21□□□□□ -0.46
PBRM1-205ENST00000409057 ZFP91Q96JP5 570 aaPredicted RBP12.21□□□□□ -0.46
PBRM1-205ENST00000409057 ZBTB7BO15156 539 aaPredicted RBP12.2□□□□□ -0.46
PBRM1-205ENST00000409057 LDHCP07864 332 aa12.2□□□□□ -0.46
PBRM1-205ENST00000409057 HMGB2P26583 209 aaKnown RBP12.2□□□□□ -0.46
PBRM1-205ENST00000409057 HSPA4P34932 840 aa12.2□□□□□ -0.46
PBRM1-205ENST00000409057 NMIQ13287 307 aaPredicted RBP12.2□□□□□ -0.46
PBRM1-205ENST00000409057 TCERG1LQ5VWI1 586 aa12.2□□□□□ -0.46
PBRM1-205ENST00000409057 HOOK3Q86VS8 718 aa12.2□□□□□ -0.46
PBRM1-205ENST00000409057 CTNNBL1Q8WYA6 563 aaPredicted RBP12.2□□□□□ -0.46
PBRM1-205ENST00000409057 RNF123Q5XPI4 1314 aa12.2□□□□□ -0.46
PBRM1-205ENST00000409057 CTTNBP2Q8WZ74 1663 aa12.2□□□□□ -0.46
PBRM1-205ENST00000409057 MARCKSP29966 332 aaPredicted RBP12.2□□□□□ -0.46
PBRM1-205ENST00000409057 AFMP43652 599 aa12.2□□□□□ -0.46
PBRM1-205ENST00000409057 GTF2A1P52655 376 aaPredicted RBP12.2□□□□□ -0.46
PBRM1-205ENST00000409057 PDE4BQ07343 736 aa12.2□□□□□ -0.46
PBRM1-205ENST00000409057 PRPF4BQ13523 1007 aaKnown RBP12.2□□□□□ -0.46
PBRM1-205ENST00000409057 SYT10Q6XYQ8 523 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms