RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 SSRP1Q08945 709 aaKnown RBP4.42□□□□□ -1.7
RGPD4-201ENST00000408999 CAMK4Q16566 473 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 DCAF5Q96JK2 942 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 UTP14AQ9BVJ6 771 aaKnown RBP4.42□□□□□ -1.7
RGPD4-201ENST00000408999 ZHX3Q9H4I2 956 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 SNRKQ9NRH2 765 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 GOLGA8AA7E2F4 631 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 ATP8B2P98198 1209 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 SLF2Q8IX21 1173 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 DDX17Q92841 729 aaKnown RBP4.42□□□□□ -1.7
RGPD4-201ENST00000408999 BTG4Q9NY30 223 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 MLH3Q9UHC1 1453 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 DZIP3Q86Y13 1208 aaKnown RBP4.42□□□□□ -1.7
RGPD4-201ENST00000408999 MNS1Q8NEH6 495 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 CAGE1Q8TC20 777 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 ZNF622Q969S3 477 aaKnown RBP eCLIP4.42□□□□□ -1.7
RGPD4-201ENST00000408999 CFAP65Q6ZU64 1925 aaKnown RBP4.42□□□□□ -1.7
RGPD4-201ENST00000408999 ERVK-7P63135 1459 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 PLEKHG1Q9ULL1 1385 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 PRDM15P57071 1507 aaPredicted RBP4.42□□□□□ -1.7
RGPD4-201ENST00000408999 C6orf229H3BNL8 230 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 VAMP4O75379 141 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 UQCRFS1P1P0C7P4 283 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 GJB2P29033 226 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 GPS2Q13227 327 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 STIM1Q13586 685 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 ANKRD44Q8N8A2 993 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 SMARCC1Q92922 1105 aaPredicted RBP4.42□□□□□ -1.7
RGPD4-201ENST00000408999 ORAI2Q96SN7 254 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 SETDB2Q96T68 719 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 RNF41Q9H4P4 317 aaPredicted RBP4.42□□□□□ -1.7
RGPD4-201ENST00000408999 GRPEL1Q9HAV7 217 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 LIMCH1Q9UPQ0 1083 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 FAM135BQ49AJ0 1406 aa4.42□□□□□ -1.7
RGPD4-201ENST00000408999 CLTCL1P53675 1640 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 LMTK2Q8IWU2 1503 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 SDSP20132 328 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 SSFA2P28290 1259 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 MCM4P33991 863 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 CCT2P78371 535 aaKnown RBP4.41□□□□□ -1.7
RGPD4-201ENST00000408999 GUCY1B3Q02153 619 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 CCDC96Q2M329 555 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 CWF19L2Q2TBE0 894 aaKnown RBP4.41□□□□□ -1.7
RGPD4-201ENST00000408999 CEP85Q6P2H3 762 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 CCDC144CPQ8IYA2 1237 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 ZNF444Q8N0Y2 327 aaPredicted RBP4.41□□□□□ -1.7
RGPD4-201ENST00000408999 FUCA2Q9BTY2 467 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 TANGO6Q9C0B7 1094 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 PA2G4Q9UQ80 394 aaKnown RBP4.41□□□□□ -1.7
RGPD4-201ENST00000408999 NIP7Q9Y221 180 aaKnown RBP eCLIP4.41□□□□□ -1.7
RGPD4-201ENST00000408999 UNC13BO14795 1591 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 IFIT3O14879 490 aaKnown RBP4.41□□□□□ -1.7
RGPD4-201ENST00000408999 CCP110O43303 1012 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 CHMLP26374 656 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 HAND2P61296 217 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 FOXR1Q6PIV2 292 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 FERMT3Q86UX7 667 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 ANKRD18AQ8IVF6 992 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 REXO1L1PQ8IX06 675 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 CELSR2Q9HCU4 2923 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 IQGAP1P46940 1657 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 SYCE3A1L190 88 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 CBFA2T2O43439 604 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 OFD1O75665 1012 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 GSTO1P78417 241 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 FAM43BQ6ZT52 329 aaPredicted RBP4.41□□□□□ -1.7
RGPD4-201ENST00000408999 CATIPQ7Z7H3 387 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 C16orf71Q8IYS4 520 aaPredicted RBP4.41□□□□□ -1.7
RGPD4-201ENST00000408999 C8orf76Q96K31 380 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 PHAXQ9H814 394 aaKnown RBP4.41□□□□□ -1.7
RGPD4-201ENST00000408999 R3HCC1Q9Y3T6 440 aaKnown RBP4.41□□□□□ -1.7
RGPD4-201ENST00000408999 USP16Q9Y5T5 823 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.41□□□□□ -1.7
RGPD4-201ENST00000408999 PDE1AP54750 535 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 TMEM67Q5HYA8 995 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 SPTY2D1Q68D10 685 aaPredicted RBP4.41□□□□□ -1.7
RGPD4-201ENST00000408999 CTCFLQ8NI51 663 aaPredicted RBP4.41□□□□□ -1.7
RGPD4-201ENST00000408999 BICC1Q9H694 974 aaKnown RBP4.41□□□□□ -1.7
RGPD4-201ENST00000408999 HMG20BQ9P0W2 317 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 TMEM63CQ9P1W3 806 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 MYH15Q9Y2K3 1946 aa4.41□□□□□ -1.7
RGPD4-201ENST00000408999 MICAL3Q7RTP6 2002 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 FER1L4A9Z1Z3 1794 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 CLASP1Q7Z460 1538 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 SSBP05455 408 aaKnown RBP eCLIP4.4□□□□□ -1.7
RGPD4-201ENST00000408999 LTKP29376 864 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 TFCP2Q12800 502 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 LMBR1LQ6UX01 489 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 IQCA1Q86XH1 822 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 RAB11FIP4Q86YS3 637 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 NKX2-3Q8TAU0 364 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 TBC1D32Q96NH3 1257 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 NYXQ9GZU5 481 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 CCDC196A0A1B0GTZ2 297 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 NMIQ13287 307 aaPredicted RBP4.4□□□□□ -1.7
RGPD4-201ENST00000408999 MAP3K11Q16584 847 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 ODF2Q5BJF6 829 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 WWC2Q6AWC2 1192 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 MFSD6Q6ZSS7 791 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 PPFIBP1Q86W92 1011 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms