RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 HHIPL1Q96JK4 782 aa16.33■□□□□ 0.2
SNORD88B-201ENST00000408454 BSDC1Q9NW68 430 aaPredicted RBP16.33■□□□□ 0.2
SNORD88B-201ENST00000408454 ADAMTSL1Q8N6G6 1762 aa16.33■□□□□ 0.2
SNORD88B-201ENST00000408454 CACNA1FO60840 1977 aa16.33■□□□□ 0.2
SNORD88B-201ENST00000408454 GPSM2P81274 684 aa16.32■□□□□ 0.2
SNORD88B-201ENST00000408454 FAM9BQ8IZU0 186 aa16.32■□□□□ 0.2
SNORD88B-201ENST00000408454 OGFOD1Q8N543 542 aa16.32■□□□□ 0.2
SNORD88B-201ENST00000408454 TSPYL6Q8N831 410 aa16.32■□□□□ 0.2
SNORD88B-201ENST00000408454 AGBL3Q8NEM8 1001 aa16.32■□□□□ 0.2
SNORD88B-201ENST00000408454 DCPSQ96C86 337 aaKnown RBP16.32■□□□□ 0.2
SNORD88B-201ENST00000408454 PLA2G12BQ9BX93 195 aa16.32■□□□□ 0.2
SNORD88B-201ENST00000408454 LEMD3Q9Y2U8 911 aa16.32■□□□□ 0.2
SNORD88B-201ENST00000408454 RIMBP2O15034 1052 aa16.31■□□□□ 0.2
SNORD88B-201ENST00000408454 CA12O43570 354 aa16.31■□□□□ 0.2
SNORD88B-201ENST00000408454 KCNJ4P48050 445 aa16.31■□□□□ 0.2
SNORD88B-201ENST00000408454 CTCFP49711 727 aaPredicted RBP16.31■□□□□ 0.2
SNORD88B-201ENST00000408454 GCKRQ14397 625 aa16.31■□□□□ 0.2
SNORD88B-201ENST00000408454 PAXIP1Q6ZW49 1069 aaPredicted RBP16.31■□□□□ 0.2
SNORD88B-201ENST00000408454 UBE3BQ7Z3V4 1068 aa16.31■□□□□ 0.2
SNORD88B-201ENST00000408454 PGAP2Q9UHJ9 254 aa16.31■□□□□ 0.2
SNORD88B-201ENST00000408454 ZNF609O15014 1411 aa16.3■□□□□ 0.2
SNORD88B-201ENST00000408454 MED23Q9ULK4 1368 aa16.3■□□□□ 0.2
SNORD88B-201ENST00000408454 ANKRD18BA2A2Z9 1011 aa16.3■□□□□ 0.2
SNORD88B-201ENST00000408454 SULF1Q8IWU6 871 aa16.3■□□□□ 0.2
SNORD88B-201ENST00000408454 MICALL2Q8IY33 904 aa16.3■□□□□ 0.2
SNORD88B-201ENST00000408454 DBNDD1Q9H9R9 158 aa16.3■□□□□ 0.2
SNORD88B-201ENST00000408454 HDAC5Q9UQL6 1122 aa16.3■□□□□ 0.2
SNORD88B-201ENST00000408454 H7C1W4 665 aa16.29■□□□□ 0.2
SNORD88B-201ENST00000408454 MAP2K2P36507 400 aa16.29■□□□□ 0.2
SNORD88B-201ENST00000408454 TAF7LQ5H9L4 462 aa16.29■□□□□ 0.2
SNORD88B-201ENST00000408454 TNS4Q8IZW8 715 aa16.29■□□□□ 0.2
SNORD88B-201ENST00000408454 TTLL11Q8NHH1 800 aa16.29■□□□□ 0.2
SNORD88B-201ENST00000408454 POLLQ9UGP5 575 aa16.29■□□□□ 0.2
SNORD88B-201ENST00000408454 USP17L3A6NCW0 530 aa16.28■□□□□ 0.2
SNORD88B-201ENST00000408454 USP17L4A6NCW7 530 aa16.28■□□□□ 0.2
SNORD88B-201ENST00000408454 E9PSI1 815 aa16.28■□□□□ 0.2
SNORD88B-201ENST00000408454 PSMD14O00487 310 aa16.28■□□□□ 0.2
SNORD88B-201ENST00000408454 VAMP4O75379 141 aa16.28■□□□□ 0.2
SNORD88B-201ENST00000408454 IGKV5-2P06315 115 aa16.28■□□□□ 0.2
SNORD88B-201ENST00000408454 EXOSC9Q06265 439 aaKnown RBP16.28■□□□□ 0.2
SNORD88B-201ENST00000408454 IFIT5Q13325 482 aaKnown RBP16.28■□□□□ 0.2
SNORD88B-201ENST00000408454 USP17L1Q7RTZ2 530 aa16.28■□□□□ 0.2
SNORD88B-201ENST00000408454 COA1Q9GZY4 146 aa16.28■□□□□ 0.2
SNORD88B-201ENST00000408454 PRDM10Q9NQV6 1147 aa16.28■□□□□ 0.2
SNORD88B-201ENST00000408454 C9orf78Q9NZ63 289 aaPredicted RBP16.28■□□□□ 0.2
SNORD88B-201ENST00000408454 HDAC9Q9UKV0 1011 aa16.28■□□□□ 0.2
SNORD88B-201ENST00000408454 COL4A5P29400 1685 aa16.27■□□□□ 0.2
SNORD88B-201ENST00000408454 WDR33Q9C0J8 1336 aaKnown RBP16.27■□□□□ 0.2
SNORD88B-201ENST00000408454 DUOX1Q9NRD9 1551 aa16.27■□□□□ 0.2
SNORD88B-201ENST00000408454 ALDH1L1O75891 902 aa16.27■□□□□ 0.2
SNORD88B-201ENST00000408454 VIL1P09327 827 aaKnown RBP16.27■□□□□ 0.2
SNORD88B-201ENST00000408454 CCDC57Q2TAC2 916 aa16.27■□□□□ 0.2
SNORD88B-201ENST00000408454 CWF19L2Q2TBE0 894 aaKnown RBP16.27■□□□□ 0.2
SNORD88B-201ENST00000408454 C2orf69Q8N8R5 385 aa16.27■□□□□ 0.2
SNORD88B-201ENST00000408454 SEC31BQ9NQW1 1179 aa16.27■□□□□ 0.2
SNORD88B-201ENST00000408454 SALL2Q9Y467 1007 aaPredicted RBP16.27■□□□□ 0.2
SNORD88B-201ENST00000408454 TLL2Q9Y6L7 1015 aa16.27■□□□□ 0.2
SNORD88B-201ENST00000408454 CELF2O95319 508 aaKnown RBP16.26■□□□□ 0.19
SNORD88B-201ENST00000408454 ITGA6P23229 1130 aa16.26■□□□□ 0.19
SNORD88B-201ENST00000408454 VEGFBP49765 207 aa16.26■□□□□ 0.19
SNORD88B-201ENST00000408454 CCT4P50991 539 aaKnown RBP16.26■□□□□ 0.19
SNORD88B-201ENST00000408454 KIF4BQ2VIQ3 1234 aa16.26■□□□□ 0.19
SNORD88B-201ENST00000408454 CCDC184Q52MB2 194 aa16.26■□□□□ 0.19
SNORD88B-201ENST00000408454 RSBN1LQ6PCB5 846 aaPredicted RBP16.26■□□□□ 0.19
SNORD88B-201ENST00000408454 KRT26Q7Z3Y9 468 aa16.26■□□□□ 0.19
SNORD88B-201ENST00000408454 REM2Q8IYK8 340 aaPredicted RBP16.26■□□□□ 0.19
SNORD88B-201ENST00000408454 CEP350Q5VT06 3117 aa16.26■□□□□ 0.19
SNORD88B-201ENST00000408454 PTPRCP08575 1304 aa16.25■□□□□ 0.19
SNORD88B-201ENST00000408454 PITPNM2Q9BZ72 1349 aa16.25■□□□□ 0.19
SNORD88B-201ENST00000408454 YDJCA8MPS7 323 aa16.25■□□□□ 0.19
SNORD88B-201ENST00000408454 CT47B1P0C2W7 299 aaPredicted RBP16.25■□□□□ 0.19
SNORD88B-201ENST00000408454 USP17L8P0C7I0 530 aa16.25■□□□□ 0.19
SNORD88B-201ENST00000408454 NF2P35240 595 aa16.25■□□□□ 0.19
SNORD88B-201ENST00000408454 FKBP1BP68106 108 aa16.25■□□□□ 0.19
SNORD88B-201ENST00000408454 NOGQ13253 232 aa16.25■□□□□ 0.19
SNORD88B-201ENST00000408454 DOK7Q18PE1 504 aa16.25■□□□□ 0.19
SNORD88B-201ENST00000408454 CAPNS2Q96L46 248 aa16.25■□□□□ 0.19
SNORD88B-201ENST00000408454 SRCIN1Q9C0H9 1055 aa16.25■□□□□ 0.19
SNORD88B-201ENST00000408454 GREM2Q9H772 168 aa16.25■□□□□ 0.19
SNORD88B-201ENST00000408454 MYH3P11055 1940 aa16.24■□□□□ 0.19
SNORD88B-201ENST00000408454 STRIP1Q5VSL9 837 aa16.24■□□□□ 0.19
SNORD88B-201ENST00000408454 CCDC102AQ96A19 550 aa16.24■□□□□ 0.19
SNORD88B-201ENST00000408454 CCDC85AQ96PX6 553 aaPredicted RBP16.24■□□□□ 0.19
SNORD88B-201ENST00000408454 MINPP1Q9UNW1 487 aa16.24■□□□□ 0.19
SNORD88B-201ENST00000408454 CHMP3Q9Y3E7 222 aa16.24■□□□□ 0.19
SNORD88B-201ENST00000408454 ZNF804BA4D1E1 1349 aa16.23■□□□□ 0.19
SNORD88B-201ENST00000408454 GRM8O00222 908 aa16.23■□□□□ 0.19
SNORD88B-201ENST00000408454 CSF1RP07333 972 aa16.23■□□□□ 0.19
SNORD88B-201ENST00000408454 ZNF804AQ7Z570 1209 aa16.23■□□□□ 0.19
SNORD88B-201ENST00000408454 GPR101Q96P66 508 aaPredicted RBP16.23■□□□□ 0.19
SNORD88B-201ENST00000408454 SAPCD2Q86UD0 394 aa16.22■□□□□ 0.19
SNORD88B-201ENST00000408454 ZNF408Q9H9D4 720 aa16.22■□□□□ 0.19
SNORD88B-201ENST00000408454 WBP1LQ9NX94 342 aa16.22■□□□□ 0.19
SNORD88B-201ENST00000408454 ZBTB12Q9Y330 459 aaPredicted RBP16.22■□□□□ 0.19
SNORD88B-201ENST00000408454 TRPM7Q96QT4 1865 aa16.22■□□□□ 0.19
SNORD88B-201ENST00000408454 LTBP1Q14766 1721 aa16.22■□□□□ 0.19
SNORD88B-201ENST00000408454 MYO1BO43795 1136 aa16.21■□□□□ 0.19
SNORD88B-201ENST00000408454 BRPF1P55201 1214 aaPredicted RBP16.21■□□□□ 0.19
SNORD88B-201ENST00000408454 ZNF280AP59817 542 aaPredicted RBP16.21■□□□□ 0.19
SNORD88B-201ENST00000408454 TBC1D10BQ4KMP7 808 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 664.7 ms