RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 DUOX1Q9NRD9 1551 aa18.3■□□□□ 0.52
CDPF1-203ENST00000404583 LTBP1Q14766 1721 aa18.29■□□□□ 0.52
CDPF1-203ENST00000404583 C6orf229H3BNL8 230 aa18.29■□□□□ 0.52
CDPF1-203ENST00000404583 PPIP5K2O43314 1243 aa18.29■□□□□ 0.52
CDPF1-203ENST00000404583 GNAI3P08754 354 aa18.29■□□□□ 0.52
CDPF1-203ENST00000404583 AOC3Q16853 763 aa18.29■□□□□ 0.52
CDPF1-203ENST00000404583 TAF7LQ5H9L4 462 aa18.29■□□□□ 0.52
CDPF1-203ENST00000404583 LARGE2Q8N3Y3 721 aa18.29■□□□□ 0.52
CDPF1-203ENST00000404583 PODXL2Q9NZ53 605 aa18.29■□□□□ 0.52
CDPF1-203ENST00000404583 LRRFIP2Q9Y608 721 aaKnown RBP18.29■□□□□ 0.52
CDPF1-203ENST00000404583 COL4A5P29400 1685 aa18.28■□□□□ 0.52
CDPF1-203ENST00000404583 ITPRIPQ8IWB1 547 aa18.28■□□□□ 0.52
CDPF1-203ENST00000404583 TBC1D16Q8TBP0 767 aa18.28■□□□□ 0.52
CDPF1-203ENST00000404583 GPR101Q96P66 508 aaPredicted RBP18.28■□□□□ 0.52
CDPF1-203ENST00000404583 NMRK2Q9NPI5 230 aa18.28■□□□□ 0.52
CDPF1-203ENST00000404583 ZC3H4Q9UPT8 1303 aaKnown RBP18.28■□□□□ 0.52
CDPF1-203ENST00000404583 WTIPA6NIX2 430 aaPredicted RBP18.27■□□□□ 0.52
CDPF1-203ENST00000404583 VPS33BQ9H267 617 aa18.27■□□□□ 0.52
CDPF1-203ENST00000404583 HDAC5Q9UQL6 1122 aa18.27■□□□□ 0.52
CDPF1-203ENST00000404583 XDHP47989 1333 aa18.27■□□□□ 0.52
CDPF1-203ENST00000404583 RIMBP2O15034 1052 aa18.26■□□□□ 0.51
CDPF1-203ENST00000404583 UFL1O94874 794 aa18.26■□□□□ 0.51
CDPF1-203ENST00000404583 KIAA2012Q0VF49 1180 aa18.26■□□□□ 0.51
CDPF1-203ENST00000404583 WASHC4Q2M389 1173 aa18.26■□□□□ 0.51
CDPF1-203ENST00000404583 LDHAL6AQ6ZMR3 332 aa18.26■□□□□ 0.51
CDPF1-203ENST00000404583 JDP2Q8WYK2 163 aa18.26■□□□□ 0.51
CDPF1-203ENST00000404583 GGA1Q9UJY5 639 aa18.26■□□□□ 0.51
CDPF1-203ENST00000404583 MS4A1P11836 297 aa18.25■□□□□ 0.51
CDPF1-203ENST00000404583 CHRNDQ07001 517 aa18.25■□□□□ 0.51
CDPF1-203ENST00000404583 KLHDC4Q8TBB5 520 aa18.25■□□□□ 0.51
CDPF1-203ENST00000404583 PUS3Q9BZE2 481 aaKnown RBP18.25■□□□□ 0.51
CDPF1-203ENST00000404583 CNNM1Q9NRU3 951 aa18.25■□□□□ 0.51
CDPF1-203ENST00000404583 GLTPD2A6NH11 291 aa18.24■□□□□ 0.51
CDPF1-203ENST00000404583 FZD9O00144 591 aa18.24■□□□□ 0.51
CDPF1-203ENST00000404583 ZBTB7BO15156 539 aaPredicted RBP18.24■□□□□ 0.51
CDPF1-203ENST00000404583 GNAI2P04899 355 aa18.24■□□□□ 0.51
CDPF1-203ENST00000404583 ATP2B4P23634 1241 aa18.24■□□□□ 0.51
CDPF1-203ENST00000404583 HELBQ8NG08 1087 aaPredicted RBP18.24■□□□□ 0.51
CDPF1-203ENST00000404583 EYA3Q99504 573 aa18.24■□□□□ 0.51
CDPF1-203ENST00000404583 HSPA6P17066 643 aa18.23■□□□□ 0.51
CDPF1-203ENST00000404583 RFX5P48382 616 aaPredicted RBP18.23■□□□□ 0.51
CDPF1-203ENST00000404583 DPY19L2Q6NUT2 758 aa18.23■□□□□ 0.51
CDPF1-203ENST00000404583 NIM1KQ8IY84 436 aa18.23■□□□□ 0.51
CDPF1-203ENST00000404583 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.23■□□□□ 0.51
CDPF1-203ENST00000404583 ANKRD2Q9GZV1 360 aa18.23■□□□□ 0.51
CDPF1-203ENST00000404583 A0A1B0GUL6 1792 aa18.23■□□□□ 0.51
CDPF1-203ENST00000404583 ZNF541Q9H0D2 1346 aa18.23■□□□□ 0.51
CDPF1-203ENST00000404583 TAF5LO75529 589 aa18.23■□□□□ 0.51
CDPF1-203ENST00000404583 DDNO94850 711 aaPredicted RBP18.23■□□□□ 0.51
CDPF1-203ENST00000404583 LRRC24Q50LG9 513 aa18.23■□□□□ 0.51
CDPF1-203ENST00000404583 C20orf194Q5TEA3 1177 aa18.23■□□□□ 0.51
CDPF1-203ENST00000404583 ZC3H12CQ9C0D7 883 aaKnown RBP18.23■□□□□ 0.51
CDPF1-203ENST00000404583 COG6Q9Y2V7 657 aa18.23■□□□□ 0.51
CDPF1-203ENST00000404583 KDM2BQ8NHM5 1336 aa18.22■□□□□ 0.51
CDPF1-203ENST00000404583 SNAP23O00161 211 aa18.22■□□□□ 0.51
CDPF1-203ENST00000404583 PTPN12Q05209 780 aaKnown RBP18.22■□□□□ 0.51
CDPF1-203ENST00000404583 DBNDD1Q9H9R9 158 aa18.22■□□□□ 0.51
CDPF1-203ENST00000404583 LEMD3Q9Y2U8 911 aa18.22■□□□□ 0.51
CDPF1-203ENST00000404583 RIPOR2Q9Y4F9 1068 aa18.22■□□□□ 0.51
CDPF1-203ENST00000404583 EIF6P56537 245 aaKnown RBP18.21■□□□□ 0.51
CDPF1-203ENST00000404583 MVPQ14764 893 aaKnown RBP18.21■□□□□ 0.51
CDPF1-203ENST00000404583 DOK7Q18PE1 504 aa18.21■□□□□ 0.51
CDPF1-203ENST00000404583 C1orf115Q9H7X2 142 aa18.21■□□□□ 0.51
CDPF1-203ENST00000404583 ZNRF3Q9ULT6 936 aa18.21■□□□□ 0.51
CDPF1-203ENST00000404583 ZNF804BA4D1E1 1349 aa18.2■□□□□ 0.5
CDPF1-203ENST00000404583 PDE3AQ14432 1141 aa18.2■□□□□ 0.5
CDPF1-203ENST00000404583 RRAGCQ9HB90 399 aa18.2■□□□□ 0.5
CDPF1-203ENST00000404583 YDJCA8MPS7 323 aa18.19■□□□□ 0.5
CDPF1-203ENST00000404583 SRGAP3O43295 1099 aa18.19■□□□□ 0.5
CDPF1-203ENST00000404583 KCNJ4P48050 445 aa18.19■□□□□ 0.5
CDPF1-203ENST00000404583 MTX1Q13505 466 aa18.19■□□□□ 0.5
CDPF1-203ENST00000404583 TXNRD3Q86VQ6 643 aa18.19■□□□□ 0.5
CDPF1-203ENST00000404583 PA2G4Q9UQ80 394 aaKnown RBP18.19■□□□□ 0.5
CDPF1-203ENST00000404583 G3V3G9 751 aa18.18■□□□□ 0.5
CDPF1-203ENST00000404583 ECE2O60344 883 aa18.18■□□□□ 0.5
CDPF1-203ENST00000404583 TOMM70O94826 608 aa18.18■□□□□ 0.5
CDPF1-203ENST00000404583 KLRK1P26718 216 aa18.18■□□□□ 0.5
CDPF1-203ENST00000404583 CXCL9Q07325 125 aa18.18■□□□□ 0.5
CDPF1-203ENST00000404583 DCAF8Q5TAQ9 597 aa18.18■□□□□ 0.5
CDPF1-203ENST00000404583 SIL1Q9H173 461 aa18.18■□□□□ 0.5
CDPF1-203ENST00000404583 GJA3Q9Y6H8 435 aa18.18■□□□□ 0.5
CDPF1-203ENST00000404583 MED23Q9ULK4 1368 aa18.18■□□□□ 0.5
CDPF1-203ENST00000404583 MROH5Q6ZUA9 1318 aa18.18■□□□□ 0.5
CDPF1-203ENST00000404583 PNMA6EA0A0J9YXQ4 647 aa18.17■□□□□ 0.5
CDPF1-203ENST00000404583 EYA2O00167 538 aa18.17■□□□□ 0.5
CDPF1-203ENST00000404583 RAD17O75943 681 aa18.17■□□□□ 0.5
CDPF1-203ENST00000404583 METTL24Q5JXM2 366 aa18.17■□□□□ 0.5
CDPF1-203ENST00000404583 KCNQ5Q9NR82 932 aa18.17■□□□□ 0.5
CDPF1-203ENST00000404583 DDX19BQ9UMR2 479 aa18.17■□□□□ 0.5
CDPF1-203ENST00000404583 WDR90Q96KV7 1748 aa18.17■□□□□ 0.5
CDPF1-203ENST00000404583 SCN9AQ15858 1988 aa18.17■□□□□ 0.5
CDPF1-203ENST00000404583 POTECB2RU33 542 aa18.16■□□□□ 0.5
CDPF1-203ENST00000404583 RRP1P56182 461 aaKnown RBP18.16■□□□□ 0.5
CDPF1-203ENST00000404583 ATG9AQ7Z3C6 839 aa18.16■□□□□ 0.5
CDPF1-203ENST00000404583 GPC2Q8N158 579 aa18.16■□□□□ 0.5
CDPF1-203ENST00000404583 COPRSQ9NQ92 184 aa18.16■□□□□ 0.5
CDPF1-203ENST00000404583 ATP8B2P98198 1209 aa18.15■□□□□ 0.5
CDPF1-203ENST00000404583 CIAPIN1Q6FI81 312 aa18.15■□□□□ 0.5
CDPF1-203ENST00000404583 VGLL2Q8N8G2 317 aa18.15■□□□□ 0.5
CDPF1-203ENST00000404583 UBE4AQ14139 1066 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms