RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 COPRSQ9NQ92 184 aa36.54■■■■□ 3.44
USP42-202ENST00000404008 MINPP1Q9UNW1 487 aa36.54■■■■□ 3.44
USP42-202ENST00000404008 AAMPQ13685 434 aa36.53■■■■□ 3.44
USP42-202ENST00000404008 GRIPAP1Q4V328 841 aa36.53■■■■□ 3.44
USP42-202ENST00000404008 CNNM1Q9NRU3 951 aa36.53■■■■□ 3.44
USP42-202ENST00000404008 DUOX1Q9NRD9 1551 aa36.53■■■■□ 3.44
USP42-202ENST00000404008 RTKN2Q8IZC4 609 aa36.53■■■■□ 3.44
USP42-202ENST00000404008 PUS3Q9BZE2 481 aaKnown RBP36.53■■■■□ 3.44
USP42-202ENST00000404008 SIRT2Q8IXJ6 389 aa36.52■■■■□ 3.44
USP42-202ENST00000404008 PA2G4Q9UQ80 394 aaKnown RBP36.52■■■■□ 3.44
USP42-202ENST00000404008 DCAF8L1A6NGE4 600 aa36.51■■■■□ 3.43
USP42-202ENST00000404008 ARHGAP27Q6ZUM4 889 aa36.51■■■■□ 3.43
USP42-202ENST00000404008 GPSM2P81274 684 aa36.5■■■■□ 3.43
USP42-202ENST00000404008 LRRC24Q50LG9 513 aa36.5■■■■□ 3.43
USP42-202ENST00000404008 RIPOR2Q9Y4F9 1068 aa36.5■■■■□ 3.43
USP42-202ENST00000404008 EYA2O00167 538 aa36.49■■■■□ 3.43
USP42-202ENST00000404008 NFKBIEO00221 500 aa36.49■■■■□ 3.43
USP42-202ENST00000404008 MPNDQ8N594 471 aa36.49■■■■□ 3.43
USP42-202ENST00000404008 SIL1Q9H173 461 aa36.49■■■■□ 3.43
USP42-202ENST00000404008 FBXO3Q9UK99 471 aa36.49■■■■□ 3.43
USP42-202ENST00000404008 CHRNDQ07001 517 aa36.48■■■■□ 3.43
USP42-202ENST00000404008 DPP8Q6V1X1 898 aaPredicted RBP36.48■■■■□ 3.43
USP42-202ENST00000404008 PODXL2Q9NZ53 605 aa36.48■■■■□ 3.43
USP42-202ENST00000404008 NSFL1CQ9UNZ2 370 aaKnown RBP36.48■■■■□ 3.43
USP42-202ENST00000404008 PCDHB15Q9Y5E8 787 aa36.48■■■■□ 3.43
USP42-202ENST00000404008 SBF1O95248 1867 aa36.48■■■■□ 3.43
USP42-202ENST00000404008 CCDC88AQ3V6T2 1871 aa36.47■■■■□ 3.43
USP42-202ENST00000404008 CIAO1O76071 339 aa36.47■■■■□ 3.43
USP42-202ENST00000404008 PSMD1Q99460 953 aa36.47■■■■□ 3.43
USP42-202ENST00000404008 XDHP47989 1333 aa36.47■■■■□ 3.43
USP42-202ENST00000404008 LTBP3Q9NS15 1303 aa36.47■■■■□ 3.43
USP42-202ENST00000404008 FKBP4Q02790 459 aaKnown RBP eCLIP36.46■■■■□ 3.43
USP42-202ENST00000404008 ATG9AQ7Z3C6 839 aa36.46■■■■□ 3.43
USP42-202ENST00000404008 ANKRD2Q9GZV1 360 aa36.46■■■■□ 3.43
USP42-202ENST00000404008 TAOK3Q9H2K8 898 aa36.46■■■■□ 3.43
USP42-202ENST00000404008 ANKIB1Q9P2G1 1089 aa36.46■■■■□ 3.43
USP42-202ENST00000404008 HMMRO75330 724 aa36.45■■■■□ 3.43
USP42-202ENST00000404008 RTFDC1Q9BY42 306 aaPredicted RBP36.45■■■■□ 3.43
USP42-202ENST00000404008 MROH5Q6ZUA9 1318 aa36.45■■■■□ 3.43
USP42-202ENST00000404008 RASSF7Q02833 373 aa36.44■■■■□ 3.42
USP42-202ENST00000404008 IL15P40933 162 aaPredicted RBP36.41■■■■□ 3.42
USP42-202ENST00000404008 HELBQ8NG08 1087 aaPredicted RBP36.41■■■■□ 3.42
USP42-202ENST00000404008 TBC1D16Q8TBP0 767 aa36.41■■■■□ 3.42
USP42-202ENST00000404008 POLLQ9UGP5 575 aa36.41■■■■□ 3.42
USP42-202ENST00000404008 NOP58Q9Y2X3 529 aaKnown RBP36.41■■■■□ 3.42
USP42-202ENST00000404008 METTL24Q5JXM2 366 aa36.4■■■■□ 3.42
USP42-202ENST00000404008 GGA1Q9UJY5 639 aa36.4■■■■□ 3.42
USP42-202ENST00000404008 DICER1Q9UPY3 1922 aaKnown RBP36.4■■■■□ 3.42
USP42-202ENST00000404008 TAF5LO75529 589 aa36.4■■■■□ 3.42
USP42-202ENST00000404008 VGLL2Q8N8G2 317 aa36.4■■■■□ 3.42
USP42-202ENST00000404008 SURF6O75683 361 aaKnown RBP36.39■■■■□ 3.42
USP42-202ENST00000404008 UFL1O94874 794 aa36.39■■■■□ 3.42
USP42-202ENST00000404008 ATP2B4P23634 1241 aa36.39■■■■□ 3.42
USP42-202ENST00000404008 SUPT20HQ8NEM7 779 aa36.39■■■■□ 3.42
USP42-202ENST00000404008 WTIPA6NIX2 430 aaPredicted RBP36.38■■■■□ 3.41
USP42-202ENST00000404008 PRELPP51888 382 aa36.38■■■■□ 3.41
USP42-202ENST00000404008 G3BP1Q13283 466 aaKnown RBP eCLIP36.38■■■■□ 3.41
USP42-202ENST00000404008 ZNF277Q9NRM2 450 aaPredicted RBP36.38■■■■□ 3.41
USP42-202ENST00000404008 LEMD3Q9Y2U8 911 aa36.38■■■■□ 3.41
USP42-202ENST00000404008 C6orf229H3BNL8 230 aa36.37■■■■□ 3.41
USP42-202ENST00000404008 ZNF804BA4D1E1 1349 aa36.36■■■■□ 3.41
USP42-202ENST00000404008 PDE8BO95263 885 aa36.36■■■■□ 3.41
USP42-202ENST00000404008 CHD4Q14839 1912 aa36.35■■■■□ 3.41
USP42-202ENST00000404008 LMNB1P20700 586 aa36.34■■■■□ 3.41
USP42-202ENST00000404008 GPR101Q96P66 508 aaPredicted RBP36.34■■■■□ 3.41
USP42-202ENST00000404008 EXOC6BQ9Y2D4 811 aa36.34■■■■□ 3.41
USP42-202ENST00000404008 SNAP23O00161 211 aa36.33■■■■□ 3.41
USP42-202ENST00000404008 NEFLP07196 543 aa36.33■■■■□ 3.41
USP42-202ENST00000404008 IARSP41252 1262 aaKnown RBP36.33■■■■□ 3.41
USP42-202ENST00000404008 KCNJ4P48050 445 aa36.33■■■■□ 3.41
USP42-202ENST00000404008 OS9Q13438 667 aaPredicted RBP36.33■■■■□ 3.41
USP42-202ENST00000404008 VPS33BQ9H267 617 aa36.33■■■■□ 3.41
USP42-202ENST00000404008 CEP126Q9P2H0 1117 aa36.33■■■■□ 3.41
USP42-202ENST00000404008 TIAM2Q8IVF5 1701 aa36.32■■■■□ 3.41
USP42-202ENST00000404008 SASH1O94885 1247 aa36.32■■■■□ 3.4
USP42-202ENST00000404008 EYA3Q99504 573 aa36.32■■■■□ 3.4
USP42-202ENST00000404008 COL4A5P29400 1685 aa36.32■■■■□ 3.4
USP42-202ENST00000404008 TFCP2Q12800 502 aa36.31■■■■□ 3.4
USP42-202ENST00000404008 WASHC4Q2M389 1173 aa36.31■■■■□ 3.4
USP42-202ENST00000404008 MED23Q9ULK4 1368 aa36.31■■■■□ 3.4
USP42-202ENST00000404008 ARAP2Q8WZ64 1704 aa36.3■■■■□ 3.4
USP42-202ENST00000404008 KIAA2012Q0VF49 1180 aa36.3■■■■□ 3.4
USP42-202ENST00000404008 HDAC1Q13547 482 aaPredicted RBP36.3■■■■□ 3.4
USP42-202ENST00000404008 UBE4AQ14139 1066 aa36.3■■■■□ 3.4
USP42-202ENST00000404008 AOC3Q16853 763 aa36.3■■■■□ 3.4
USP42-202ENST00000404008 HSP90AB4PQ58FF6 505 aa36.3■■■■□ 3.4
USP42-202ENST00000404008 PPIP5K2O43314 1243 aa36.29■■■■□ 3.4
USP42-202ENST00000404008 PUM3Q15397 648 aaKnown RBP36.29■■■■□ 3.4
USP42-202ENST00000404008 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP36.29■■■■□ 3.4
USP42-202ENST00000404008 IRS2Q9Y4H2 1338 aa36.29■■■■□ 3.4
USP42-202ENST00000404008 FGFR2P21802 821 aa36.27■■■■□ 3.4
USP42-202ENST00000404008 KLRK1P26718 216 aa36.27■■■■□ 3.4
USP42-202ENST00000404008 ERC1Q8IUD2 1116 aa36.27■■■■□ 3.4
USP42-202ENST00000404008 ZC3H12CQ9C0D7 883 aaKnown RBP36.27■■■■□ 3.4
USP42-202ENST00000404008 DCTPP1Q9H773 170 aa36.27■■■■□ 3.4
USP42-202ENST00000404008 RIMBP2O15034 1052 aa36.27■■■■□ 3.4
USP42-202ENST00000404008 C9orf131Q5VYM1 1079 aa36.27■■■■□ 3.4
USP42-202ENST00000404008 LARGE2Q8N3Y3 721 aa36.27■■■■□ 3.4
USP42-202ENST00000404008 RNF181Q9P0P0 153 aa36.27■■■■□ 3.4
USP42-202ENST00000404008 C15orf52Q6ZUT6 534 aaKnown RBP36.26■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms