RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 TBC1D10BQ4KMP7 808 aaPredicted RBP12.42□□□□□ -0.42
NUP43-204ENST00000403890 FBXO46Q6PJ61 603 aaPredicted RBP12.42□□□□□ -0.42
NUP43-204ENST00000403890 C3orf67Q6ZVT6 689 aa12.42□□□□□ -0.42
NUP43-204ENST00000403890 SP8Q8IXZ3 490 aa12.42□□□□□ -0.42
NUP43-204ENST00000403890 NGEFQ8N5V2 710 aa12.42□□□□□ -0.42
NUP43-204ENST00000403890 ZNF296Q8WUU4 475 aaPredicted RBP12.42□□□□□ -0.42
NUP43-204ENST00000403890 PCDHB8Q9UN66 801 aa12.42□□□□□ -0.42
NUP43-204ENST00000403890 IBTKQ9P2D0 1353 aaPredicted RBP12.42□□□□□ -0.42
NUP43-204ENST00000403890 MAP3K15Q6ZN16 1313 aa12.41□□□□□ -0.42
NUP43-204ENST00000403890 YDJCA8MPS7 323 aa12.41□□□□□ -0.42
NUP43-204ENST00000403890 FXR1P51114 621 aaKnown RBP eCLIP12.41□□□□□ -0.42
NUP43-204ENST00000403890 TMEM121BQ9BXQ6 578 aaPredicted RBP12.41□□□□□ -0.42
NUP43-204ENST00000403890 UBN2Q6ZU65 1347 aa12.4□□□□□ -0.42
NUP43-204ENST00000403890 ST18O60284 1047 aa12.4□□□□□ -0.42
NUP43-204ENST00000403890 TBC1D8O95759 1140 aa12.4□□□□□ -0.42
NUP43-204ENST00000403890 KIF6Q6ZMV9 814 aa12.4□□□□□ -0.42
NUP43-204ENST00000403890 PPP1R42Q7Z4L9 355 aa12.4□□□□□ -0.42
NUP43-204ENST00000403890 SULF1Q8IWU6 871 aa12.4□□□□□ -0.42
NUP43-204ENST00000403890 RTF1Q92541 710 aaKnown RBP12.4□□□□□ -0.42
NUP43-204ENST00000403890 PHACTR3Q96KR7 559 aa12.4□□□□□ -0.42
NUP43-204ENST00000403890 NTSR2O95665 410 aa12.39□□□□□ -0.43
NUP43-204ENST00000403890 EGFRP00533 1210 aa12.39□□□□□ -0.43
NUP43-204ENST00000403890 CHRM1P11229 460 aaPredicted RBP12.39□□□□□ -0.43
NUP43-204ENST00000403890 EIF4G2P78344 907 aaKnown RBP eCLIP12.39□□□□□ -0.43
NUP43-204ENST00000403890 MKRN3Q13064 507 aaKnown RBP12.39□□□□□ -0.43
NUP43-204ENST00000403890 SLC10A5Q5PT55 438 aa12.39□□□□□ -0.43
NUP43-204ENST00000403890 RBM26Q5T8P6 1007 aaKnown RBP12.39□□□□□ -0.43
NUP43-204ENST00000403890 RASAL3Q86YV0 1011 aa12.39□□□□□ -0.43
NUP43-204ENST00000403890 ZNF34Q8IZ26 560 aa12.39□□□□□ -0.43
NUP43-204ENST00000403890 POLR2AP24928 1970 aaKnown RBP12.38□□□□□ -0.43
NUP43-204ENST00000403890 GPR25O00155 361 aa12.38□□□□□ -0.43
NUP43-204ENST00000403890 PSMD14O00487 310 aa12.38□□□□□ -0.43
NUP43-204ENST00000403890 RPS12P25398 132 aaKnown RBP12.38□□□□□ -0.43
NUP43-204ENST00000403890 NOM1Q5C9Z4 860 aaKnown RBP12.38□□□□□ -0.43
NUP43-204ENST00000403890 TTLL7Q6ZT98 887 aa12.38□□□□□ -0.43
NUP43-204ENST00000403890 MCM10Q7L590 875 aa12.38□□□□□ -0.43
NUP43-204ENST00000403890 ZBTB3Q9H5J0 574 aa12.38□□□□□ -0.43
NUP43-204ENST00000403890 TIMELESSQ9UNS1 1208 aa12.38□□□□□ -0.43
NUP43-204ENST00000403890 RRP7AQ9Y3A4 280 aaKnown RBP12.38□□□□□ -0.43
NUP43-204ENST00000403890 ABCC4O15439 1325 aa12.37□□□□□ -0.43
NUP43-204ENST00000403890 FKBP1BP68106 108 aa12.37□□□□□ -0.43
NUP43-204ENST00000403890 PARP10Q53GL7 1025 aa12.37□□□□□ -0.43
NUP43-204ENST00000403890 CDCA5Q96FF9 252 aa12.37□□□□□ -0.43
NUP43-204ENST00000403890 HSPA5P11021 654 aaKnown RBP12.36□□□□□ -0.43
NUP43-204ENST00000403890 PRKAR2BP31323 418 aa12.36□□□□□ -0.43
NUP43-204ENST00000403890 GIGYF2Q6Y7W6 1299 aaKnown RBP12.36□□□□□ -0.43
NUP43-204ENST00000403890 UTP14AQ9BVJ6 771 aaKnown RBP12.36□□□□□ -0.43
NUP43-204ENST00000403890 GGA3Q9NZ52 723 aa12.36□□□□□ -0.43
NUP43-204ENST00000403890 NUP98P52948 1817 aa12.35□□□□□ -0.43
NUP43-204ENST00000403890 FKTNO75072 461 aa12.35□□□□□ -0.43
NUP43-204ENST00000403890 MYL6BP14649 208 aa12.35□□□□□ -0.43
NUP43-204ENST00000403890 TM4SF4P48230 202 aa12.35□□□□□ -0.43
NUP43-204ENST00000403890 TAF7Q15545 349 aaPredicted RBP12.35□□□□□ -0.43
NUP43-204ENST00000403890 WASHC4Q2M389 1173 aa12.35□□□□□ -0.43
NUP43-204ENST00000403890 KIF4BQ2VIQ3 1234 aa12.35□□□□□ -0.43
NUP43-204ENST00000403890 INTS3Q68E01 1043 aaKnown RBP12.35□□□□□ -0.43
NUP43-204ENST00000403890 DDX46Q7L014 1031 aaKnown RBP12.35□□□□□ -0.43
NUP43-204ENST00000403890 MKI67P46013 3256 aaKnown RBP12.35□□□□□ -0.43
NUP43-204ENST00000403890 KIAA0100Q14667 2235 aaKnown RBP12.35□□□□□ -0.43
NUP43-204ENST00000403890 GRAPQ13588 217 aa12.34□□□□□ -0.43
NUP43-204ENST00000403890 CC2D1BQ5T0F9 858 aaKnown RBP12.34□□□□□ -0.43
NUP43-204ENST00000403890 TMC4Q7Z404 712 aa12.34□□□□□ -0.43
NUP43-204ENST00000403890 GRAPLQ8TC17 118 aaPredicted RBP12.34□□□□□ -0.43
NUP43-204ENST00000403890 DBNDD1Q9H9R9 158 aa12.34□□□□□ -0.43
NUP43-204ENST00000403890 MIS18AQ9NYP9 233 aa12.34□□□□□ -0.43
NUP43-204ENST00000403890 HTATSF1O43719 755 aaKnown RBP12.33□□□□□ -0.44
NUP43-204ENST00000403890 DCTN1Q14203 1278 aa12.33□□□□□ -0.44
NUP43-204ENST00000403890 RSPH6AQ9H0K4 717 aa12.33□□□□□ -0.44
NUP43-204ENST00000403890 ASTN2O75129 1339 aaPredicted RBP12.33□□□□□ -0.44
NUP43-204ENST00000403890 TRIOBPQ9H2D6 2365 aa12.33□□□□□ -0.44
NUP43-204ENST00000403890 CEP290O15078 2479 aa12.32□□□□□ -0.44
NUP43-204ENST00000403890 UBE2Q2LH0YL09 131 aa12.32□□□□□ -0.44
NUP43-204ENST00000403890 DLL1O00548 723 aa12.32□□□□□ -0.44
NUP43-204ENST00000403890 RIMBP2O15034 1052 aa12.32□□□□□ -0.44
NUP43-204ENST00000403890 HCLS1P14317 486 aaPredicted RBP12.32□□□□□ -0.44
NUP43-204ENST00000403890 CFHR5Q9BXR6 569 aa12.32□□□□□ -0.44
NUP43-204ENST00000403890 KCNQ5Q9NR82 932 aa12.32□□□□□ -0.44
NUP43-204ENST00000403890 NSFL1CQ9UNZ2 370 aaKnown RBP12.32□□□□□ -0.44
NUP43-204ENST00000403890 COL3A1P02461 1466 aaPredicted RBP12.32□□□□□ -0.44
NUP43-204ENST00000403890 C6orf229H3BNL8 230 aa12.31□□□□□ -0.44
NUP43-204ENST00000403890 PER1O15534 1290 aaPredicted RBP12.31□□□□□ -0.44
NUP43-204ENST00000403890 ECE2O60344 883 aa12.31□□□□□ -0.44
NUP43-204ENST00000403890 VIL1P09327 827 aaKnown RBP12.31□□□□□ -0.44
NUP43-204ENST00000403890 SCARF1Q14162 830 aa12.31□□□□□ -0.44
NUP43-204ENST00000403890 ANGEL2Q5VTE6 544 aaKnown RBP12.31□□□□□ -0.44
NUP43-204ENST00000403890 MOB2Q70IA6 237 aa12.31□□□□□ -0.44
NUP43-204ENST00000403890 RTL9Q8NET4 1388 aa12.3□□□□□ -0.44
NUP43-204ENST00000403890 SREBF2Q12772 1141 aa12.3□□□□□ -0.44
NUP43-204ENST00000403890 DOK7Q18PE1 504 aa12.3□□□□□ -0.44
NUP43-204ENST00000403890 PNISRQ8TF01 805 aaKnown RBP12.3□□□□□ -0.44
NUP43-204ENST00000403890 R3HDMLQ9H3Y0 253 aa12.3□□□□□ -0.44
NUP43-204ENST00000403890 TRIM17Q9Y577 477 aa12.3□□□□□ -0.44
NUP43-204ENST00000403890 EN2P19622 333 aaPredicted RBP12.29□□□□□ -0.44
NUP43-204ENST00000403890 ZNF280AP59817 542 aaPredicted RBP12.29□□□□□ -0.44
NUP43-204ENST00000403890 EYA3Q99504 573 aa12.29□□□□□ -0.44
NUP43-204ENST00000403890 POLLQ9UGP5 575 aa12.29□□□□□ -0.44
NUP43-204ENST00000403890 NUDCQ9Y266 331 aa12.29□□□□□ -0.44
NUP43-204ENST00000403890 CUL9Q8IWT3 2517 aa12.29□□□□□ -0.44
NUP43-204ENST00000403890 DUOX1Q9NRD9 1551 aa12.28□□□□□ -0.44
NUP43-204ENST00000403890 ALDH1A1P00352 501 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 207.3 ms