RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 G3V3G9 751 aa15.96■□□□□ 0.15
PRAME-204ENST00000403441 DOK7Q18PE1 504 aa15.96■□□□□ 0.15
PRAME-204ENST00000403441 DCAF8Q5TAQ9 597 aa15.96■□□□□ 0.15
PRAME-204ENST00000403441 ZBTB38Q8NAP3 1195 aaPredicted RBP15.96■□□□□ 0.15
PRAME-204ENST00000403441 TBC1D16Q8TBP0 767 aa15.96■□□□□ 0.15
PRAME-204ENST00000403441 DCPSQ96C86 337 aaKnown RBP15.96■□□□□ 0.15
PRAME-204ENST00000403441 ZC3H12CQ9C0D7 883 aaKnown RBP15.95■□□□□ 0.14
PRAME-204ENST00000403441 ANKIB1Q9P2G1 1089 aa15.95■□□□□ 0.14
PRAME-204ENST00000403441 RTL9Q8NET4 1388 aa15.95■□□□□ 0.14
PRAME-204ENST00000403441 COL4A1P02462 1669 aa15.95■□□□□ 0.14
PRAME-204ENST00000403441 UFL1O94874 794 aa15.94■□□□□ 0.14
PRAME-204ENST00000403441 GNAI1P63096 354 aa15.94■□□□□ 0.14
PRAME-204ENST00000403441 KIF4BQ2VIQ3 1234 aa15.94■□□□□ 0.14
PRAME-204ENST00000403441 FAM161AQ3B820 660 aa15.94■□□□□ 0.14
PRAME-204ENST00000403441 CCDC152Q4G0S7 254 aa15.94■□□□□ 0.14
PRAME-204ENST00000403441 RBM26Q5T8P6 1007 aaKnown RBP15.94■□□□□ 0.14
PRAME-204ENST00000403441 C2orf69Q8N8R5 385 aa15.94■□□□□ 0.14
PRAME-204ENST00000403441 IFT57Q9NWB7 429 aa15.94■□□□□ 0.14
PRAME-204ENST00000403441 PODXL2Q9NZ53 605 aa15.94■□□□□ 0.14
PRAME-204ENST00000403441 ANP32CO43423 234 aa15.93■□□□□ 0.14
PRAME-204ENST00000403441 EGFRP00533 1210 aa15.93■□□□□ 0.14
PRAME-204ENST00000403441 SULF1Q8IWU6 871 aa15.93■□□□□ 0.14
PRAME-204ENST00000403441 CCDC191Q8NCU4 936 aa15.93■□□□□ 0.14
PRAME-204ENST00000403441 MYD88Q99836 296 aa15.93■□□□□ 0.14
PRAME-204ENST00000403441 CHMP4AQ9BY43 222 aa15.93■□□□□ 0.14
PRAME-204ENST00000403441 GBA2Q9HCG7 927 aaPredicted RBP15.93■□□□□ 0.14
PRAME-204ENST00000403441 GGA1Q9UJY5 639 aa15.93■□□□□ 0.14
PRAME-204ENST00000403441 ADM5C9JUS6 153 aa15.92■□□□□ 0.14
PRAME-204ENST00000403441 DDX58O95786 925 aaKnown RBP15.92■□□□□ 0.14
PRAME-204ENST00000403441 PCCAP05165 728 aaPredicted RBP15.92■□□□□ 0.14
PRAME-204ENST00000403441 ZNF853P0CG23 659 aa15.92■□□□□ 0.14
PRAME-204ENST00000403441 RGMBQ6NW40 437 aa15.92■□□□□ 0.14
PRAME-204ENST00000403441 CCDC102AQ96A19 550 aa15.92■□□□□ 0.14
PRAME-204ENST00000403441 PHAXQ9H814 394 aaKnown RBP15.92■□□□□ 0.14
PRAME-204ENST00000403441 SEC31BQ9NQW1 1179 aa15.92■□□□□ 0.14
PRAME-204ENST00000403441 KCNQ5Q9NR82 932 aa15.92■□□□□ 0.14
PRAME-204ENST00000403441 CWC25Q9NXE8 425 aaPredicted RBP15.92■□□□□ 0.14
PRAME-204ENST00000403441 GGA3Q9NZ52 723 aa15.92■□□□□ 0.14
PRAME-204ENST00000403441 ELL2O00472 640 aaPredicted RBP15.91■□□□□ 0.14
PRAME-204ENST00000403441 PDE8AO60658 829 aa15.91■□□□□ 0.14
PRAME-204ENST00000403441 VIL1P09327 827 aaKnown RBP15.91■□□□□ 0.14
PRAME-204ENST00000403441 DLK2Q6UY11 383 aa15.91■□□□□ 0.14
PRAME-204ENST00000403441 APAF1O14727 1248 aa15.9■□□□□ 0.14
PRAME-204ENST00000403441 ZNF157P51786 506 aaPredicted RBP15.9■□□□□ 0.14
PRAME-204ENST00000403441 MLLT1Q03111 559 aaPredicted RBP15.9■□□□□ 0.14
PRAME-204ENST00000403441 ANKRD18AQ8IVF6 992 aa15.9■□□□□ 0.14
PRAME-204ENST00000403441 MCOLN1Q9GZU1 580 aa15.9■□□□□ 0.14
PRAME-204ENST00000403441 ZNF609O15014 1411 aa15.9■□□□□ 0.14
PRAME-204ENST00000403441 XDHP47989 1333 aa15.9■□□□□ 0.14
PRAME-204ENST00000403441 SCN9AQ15858 1988 aa15.89■□□□□ 0.13
PRAME-204ENST00000403441 CASP8AP2Q9UKL3 1982 aa15.89■□□□□ 0.13
PRAME-204ENST00000403441 FAM155AB1AL88 458 aaPredicted RBP15.89■□□□□ 0.13
PRAME-204ENST00000403441 DGKZQ13574 1117 aa15.89■□□□□ 0.13
PRAME-204ENST00000403441 CCDC30Q5VVM6 783 aa15.89■□□□□ 0.13
PRAME-204ENST00000403441 RSBN1LQ6PCB5 846 aaPredicted RBP15.89■□□□□ 0.13
PRAME-204ENST00000403441 AGBL3Q8NEM8 1001 aa15.89■□□□□ 0.13
PRAME-204ENST00000403441 SAGE1Q9NXZ1 904 aa15.89■□□□□ 0.13
PRAME-204ENST00000403441 NCBP3Q53F19 620 aaKnown RBP15.88■□□□□ 0.13
PRAME-204ENST00000403441 CCDC85AQ96PX6 553 aaPredicted RBP15.88■□□□□ 0.13
PRAME-204ENST00000403441 ZIC5Q96T25 663 aa15.88■□□□□ 0.13
PRAME-204ENST00000403441 CDC5LQ99459 802 aaKnown RBP15.88■□□□□ 0.13
PRAME-204ENST00000403441 METTL22Q9BUU2 404 aaPredicted RBP15.88■□□□□ 0.13
PRAME-204ENST00000403441 POLR2AP24928 1970 aaKnown RBP15.87■□□□□ 0.13
PRAME-204ENST00000403441 ATP2B4P23634 1241 aa15.87■□□□□ 0.13
PRAME-204ENST00000403441 CTSWP56202 376 aa15.87■□□□□ 0.13
PRAME-204ENST00000403441 ZNF280AP59817 542 aaPredicted RBP15.87■□□□□ 0.13
PRAME-204ENST00000403441 C8orf58Q8NAV2 365 aa15.87■□□□□ 0.13
PRAME-204ENST00000403441 CDCA5Q96FF9 252 aa15.87■□□□□ 0.13
PRAME-204ENST00000403441 SLC10A3P09131 477 aa15.86■□□□□ 0.13
PRAME-204ENST00000403441 USP17L8P0C7I0 530 aa15.86■□□□□ 0.13
PRAME-204ENST00000403441 RGS19P49795 217 aa15.86■□□□□ 0.13
PRAME-204ENST00000403441 KIF23Q02241 960 aaPredicted RBP15.86■□□□□ 0.13
PRAME-204ENST00000403441 SCARF1Q14162 830 aa15.86■□□□□ 0.13
PRAME-204ENST00000403441 ANGEL2Q5VTE6 544 aaKnown RBP15.86■□□□□ 0.13
PRAME-204ENST00000403441 JARID2Q92833 1246 aaPredicted RBP15.86■□□□□ 0.13
PRAME-204ENST00000403441 MRS2Q9HD23 443 aa15.86■□□□□ 0.13
PRAME-204ENST00000403441 MAP3K2Q9Y2U5 619 aa15.86■□□□□ 0.13
PRAME-204ENST00000403441 PSME4Q14997 1843 aa15.86■□□□□ 0.13
PRAME-204ENST00000403441 ASTN2O75129 1339 aaPredicted RBP15.86■□□□□ 0.13
PRAME-204ENST00000403441 USP17L3A6NCW0 530 aa15.85■□□□□ 0.13
PRAME-204ENST00000403441 USP17L4A6NCW7 530 aa15.85■□□□□ 0.13
PRAME-204ENST00000403441 FKBP1BP68106 108 aa15.85■□□□□ 0.13
PRAME-204ENST00000403441 NEXNQ0ZGT2 675 aa15.85■□□□□ 0.13
PRAME-204ENST00000403441 USP17L1Q7RTZ2 530 aa15.85■□□□□ 0.13
PRAME-204ENST00000403441 PODNQ7Z5L7 613 aa15.85■□□□□ 0.13
PRAME-204ENST00000403441 STK31Q9BXU1 1019 aa15.85■□□□□ 0.13
PRAME-204ENST00000403441 MYOZ2Q9NPC6 264 aa15.85■□□□□ 0.13
PRAME-204ENST00000403441 PITPNM2Q9BZ72 1349 aa15.85■□□□□ 0.13
PRAME-204ENST00000403441 TRPA1O75762 1119 aa15.84■□□□□ 0.13
PRAME-204ENST00000403441 KSR2Q6VAB6 950 aa15.84■□□□□ 0.13
PRAME-204ENST00000403441 REM2Q8IYK8 340 aaPredicted RBP15.84■□□□□ 0.13
PRAME-204ENST00000403441 PAPPA2Q9BXP8 1791 aa15.84■□□□□ 0.13
PRAME-204ENST00000403441 MED23Q9ULK4 1368 aa15.84■□□□□ 0.13
PRAME-204ENST00000403441 PI4KAP2A4QPH2 592 aa15.83■□□□□ 0.12
PRAME-204ENST00000403441 CCDC27Q2M243 656 aa15.83■□□□□ 0.12
PRAME-204ENST00000403441 PI4KAP1Q8N8J0 262 aa15.83■□□□□ 0.12
PRAME-204ENST00000403441 GMLQ99445 158 aa15.83■□□□□ 0.12
PRAME-204ENST00000403441 BSDC1Q9NW68 430 aaPredicted RBP15.83■□□□□ 0.12
PRAME-204ENST00000403441 RNF186Q9NXI6 227 aa15.83■□□□□ 0.12
PRAME-204ENST00000403441 MYH3P11055 1940 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms