RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 CSB-PGBD3P0DP91 1061 aa10.73□□□□□ -0.69
HPS4-203ENST00000402105 TDRD7Q8NHU6 1098 aaKnown RBP10.73□□□□□ -0.69
HPS4-203ENST00000402105 NLRP2Q9NX02 1062 aa10.73□□□□□ -0.69
HPS4-203ENST00000402105 CTNNA3Q9UI47 895 aa10.73□□□□□ -0.69
HPS4-203ENST00000402105 PREX1Q8TCU6 1659 aa10.73□□□□□ -0.69
HPS4-203ENST00000402105 DLC1Q96QB1 1528 aa10.73□□□□□ -0.69
HPS4-203ENST00000402105 GIGYF1O75420 1035 aaPredicted RBP10.72□□□□□ -0.69
HPS4-203ENST00000402105 MARCKSP29966 332 aaPredicted RBP10.72□□□□□ -0.69
HPS4-203ENST00000402105 SNW1Q13573 536 aaKnown RBP10.72□□□□□ -0.69
HPS4-203ENST00000402105 UTP14CQ5TAP6 766 aaKnown RBP10.72□□□□□ -0.69
HPS4-203ENST00000402105 TTLL5Q6EMB2 1281 aa10.72□□□□□ -0.69
HPS4-203ENST00000402105 LINS1Q8NG48 757 aa10.72□□□□□ -0.69
HPS4-203ENST00000402105 DBNLQ9UJU6 430 aaKnown RBP10.72□□□□□ -0.69
HPS4-203ENST00000402105 CPLX1O14810 134 aa10.72□□□□□ -0.69
HPS4-203ENST00000402105 RESTQ13127 1097 aa10.72□□□□□ -0.69
HPS4-203ENST00000402105 KMT5BQ4FZB7 885 aa10.72□□□□□ -0.69
HPS4-203ENST00000402105 PDILTQ8N807 584 aa10.72□□□□□ -0.69
HPS4-203ENST00000402105 ANO10Q9NW15 660 aa10.72□□□□□ -0.69
HPS4-203ENST00000402105 TNRQ92752 1358 aa10.72□□□□□ -0.69
HPS4-203ENST00000402105 A0A087WZG4 1122 aa10.72□□□□□ -0.69
HPS4-203ENST00000402105 EPB41L2O43491 1005 aaKnown RBP10.72□□□□□ -0.69
HPS4-203ENST00000402105 KAZALD1Q96I82 304 aa10.72□□□□□ -0.69
HPS4-203ENST00000402105 CTIFO43310 598 aaKnown RBP10.71□□□□□ -0.69
HPS4-203ENST00000402105 RXRAP19793 462 aa10.71□□□□□ -0.69
HPS4-203ENST00000402105 KRT32Q14532 448 aa10.71□□□□□ -0.69
HPS4-203ENST00000402105 FEZ1Q99689 392 aa10.71□□□□□ -0.69
HPS4-203ENST00000402105 DNAI1Q9UI46 699 aa10.71□□□□□ -0.69
HPS4-203ENST00000402105 VGLL3A8MV65 326 aa10.71□□□□□ -0.69
HPS4-203ENST00000402105 RNMTO43148 476 aaKnown RBP10.71□□□□□ -0.69
HPS4-203ENST00000402105 URI1O94763 535 aaPredicted RBP10.71□□□□□ -0.69
HPS4-203ENST00000402105 ATP2B1P20020 1258 aa10.71□□□□□ -0.69
HPS4-203ENST00000402105 FBXO38Q6PIJ6 1188 aa10.71□□□□□ -0.69
HPS4-203ENST00000402105 SYNE3Q6ZMZ3 975 aa10.71□□□□□ -0.69
HPS4-203ENST00000402105 NFATC2IPQ8NCF5 419 aa10.71□□□□□ -0.69
HPS4-203ENST00000402105 ZFP91Q96JP5 570 aaPredicted RBP10.71□□□□□ -0.69
HPS4-203ENST00000402105 NAT10Q9H0A0 1025 aaKnown RBP10.71□□□□□ -0.69
HPS4-203ENST00000402105 ELP1O95163 1332 aa10.71□□□□□ -0.7
HPS4-203ENST00000402105 NRDCO43847 1150 aa10.71□□□□□ -0.7
HPS4-203ENST00000402105 ALDH1L1O75891 902 aa10.71□□□□□ -0.7
HPS4-203ENST00000402105 SERPINC1P01008 464 aa10.71□□□□□ -0.7
HPS4-203ENST00000402105 SFPQP23246 707 aaKnown RBP eCLIP10.71□□□□□ -0.7
HPS4-203ENST00000402105 CREBRFQ8IUR6 639 aa10.71□□□□□ -0.7
HPS4-203ENST00000402105 KRT222Q8N1A0 295 aa10.71□□□□□ -0.7
HPS4-203ENST00000402105 ZNF396Q96N95 335 aaPredicted RBP10.71□□□□□ -0.7
HPS4-203ENST00000402105 XPO4Q9C0E2 1151 aaKnown RBP10.71□□□□□ -0.7
HPS4-203ENST00000402105 PHF8Q9UPP1 1060 aa10.71□□□□□ -0.7
HPS4-203ENST00000402105 TMEM2Q9UHN6 1383 aa10.7□□□□□ -0.7
HPS4-203ENST00000402105 DPCR1Q3MIW9 517 aa10.7□□□□□ -0.7
HPS4-203ENST00000402105 MCMDC2Q4G0Z9 681 aa10.7□□□□□ -0.7
HPS4-203ENST00000402105 ZSWIM4Q9H7M6 989 aa10.7□□□□□ -0.7
HPS4-203ENST00000402105 KIF20AO95235 890 aa10.7□□□□□ -0.7
HPS4-203ENST00000402105 IGKV5-2P06315 115 aa10.7□□□□□ -0.7
HPS4-203ENST00000402105 TNNI3KQ59H18 835 aa10.7□□□□□ -0.7
HPS4-203ENST00000402105 AKAP4Q5JQC9 854 aa10.7□□□□□ -0.7
HPS4-203ENST00000402105 LMBR1LQ6UX01 489 aa10.7□□□□□ -0.7
HPS4-203ENST00000402105 LRRN4CLQ8ND94 238 aa10.7□□□□□ -0.7
HPS4-203ENST00000402105 MNS1Q8NEH6 495 aa10.7□□□□□ -0.7
HPS4-203ENST00000402105 CHMP4AQ9BY43 222 aa10.7□□□□□ -0.7
HPS4-203ENST00000402105 EPC1Q9H2F5 836 aa10.7□□□□□ -0.7
HPS4-203ENST00000402105 ZSCAN16Q9H4T2 348 aaPredicted RBP10.7□□□□□ -0.7
HPS4-203ENST00000402105 FPGT-TNNI3KV9GXZ4 949 aa10.7□□□□□ -0.7
HPS4-203ENST00000402105 SLU7O95391 586 aaKnown RBP10.7□□□□□ -0.7
HPS4-203ENST00000402105 APPP05067 770 aa10.7□□□□□ -0.7
HPS4-203ENST00000402105 NDUFA8P51970 172 aa10.7□□□□□ -0.7
HPS4-203ENST00000402105 STOX1Q6ZVD7 989 aa10.7□□□□□ -0.7
HPS4-203ENST00000402105 ZNF594Q96JF6 807 aaPredicted RBP10.7□□□□□ -0.7
HPS4-203ENST00000402105 HMG20BQ9P0W2 317 aa10.7□□□□□ -0.7
HPS4-203ENST00000402105 U3KPZ7 1027 aaPredicted RBP10.7□□□□□ -0.7
HPS4-203ENST00000402105 KDRP35968 1356 aa10.7□□□□□ -0.7
HPS4-203ENST00000402105 IQCB1Q15051 598 aa10.69□□□□□ -0.7
HPS4-203ENST00000402105 CFAP100Q494V2 611 aa10.69□□□□□ -0.7
HPS4-203ENST00000402105 TTC5Q8N0Z6 440 aa10.69□□□□□ -0.7
HPS4-203ENST00000402105 TPM4P67936 248 aa10.69□□□□□ -0.7
HPS4-203ENST00000402105 ARHGAP29Q52LW3 1261 aa10.69□□□□□ -0.7
HPS4-203ENST00000402105 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.69□□□□□ -0.7
HPS4-203ENST00000402105 ZNF397Q8NF99 534 aaPredicted RBP10.69□□□□□ -0.7
HPS4-203ENST00000402105 BBXQ8WY36 941 aaPredicted RBP10.69□□□□□ -0.7
HPS4-203ENST00000402105 PCDHA7Q9UN72 937 aa10.69□□□□□ -0.7
HPS4-203ENST00000402105 CLIC4Q9Y696 253 aa10.69□□□□□ -0.7
HPS4-203ENST00000402105 USP31Q70CQ4 1352 aa10.69□□□□□ -0.7
HPS4-203ENST00000402105 CLTCQ00610 1675 aaKnown RBP10.69□□□□□ -0.7
HPS4-203ENST00000402105 ANKRD13DQ6ZTN6 518 aa10.69□□□□□ -0.7
HPS4-203ENST00000402105 DHX32Q7L7V1 743 aaKnown RBP10.69□□□□□ -0.7
HPS4-203ENST00000402105 CCDC82Q8N4S0 544 aa10.69□□□□□ -0.7
HPS4-203ENST00000402105 NSUN7Q8NE18 718 aaKnown RBP10.69□□□□□ -0.7
HPS4-203ENST00000402105 ANKRD24Q8TF21 1146 aa10.69□□□□□ -0.7
HPS4-203ENST00000402105 IP6K1Q92551 441 aa10.69□□□□□ -0.7
HPS4-203ENST00000402105 SIRT1Q96EB6 747 aa10.69□□□□□ -0.7
HPS4-203ENST00000402105 DDX41Q9UJV9 622 aaKnown RBP10.69□□□□□ -0.7
HPS4-203ENST00000402105 SLC3A2P08195 630 aaKnown RBP10.68□□□□□ -0.7
HPS4-203ENST00000402105 FAM160A1Q05DH4 1040 aa10.68□□□□□ -0.7
HPS4-203ENST00000402105 MRPS27Q92552 414 aaKnown RBP10.68□□□□□ -0.7
HPS4-203ENST00000402105 C8orf76Q96K31 380 aa10.68□□□□□ -0.7
HPS4-203ENST00000402105 GCKRQ14397 625 aa10.68□□□□□ -0.7
HPS4-203ENST00000402105 SPECC1Q5M775 1068 aa10.68□□□□□ -0.7
HPS4-203ENST00000402105 DHX40Q8IX18 779 aaKnown RBP10.68□□□□□ -0.7
HPS4-203ENST00000402105 NEURL1BA8MQ27 555 aa10.67□□□□□ -0.7
HPS4-203ENST00000402105 RAPGEF4Q8WZA2 1011 aa10.67□□□□□ -0.7
HPS4-203ENST00000402105 UBXN4Q92575 508 aa10.67□□□□□ -0.7
HPS4-203ENST00000402105 UTP14AQ9BVJ6 771 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms