RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 ELP3Q9H9T3 547 aa8.36□□□□□ -1.07
SAMSN1-202ENST00000400564 ABI2Q9NYB9 513 aaPredicted RBP8.36□□□□□ -1.07
SAMSN1-202ENST00000400564 GNEQ9Y223 722 aaKnown RBP8.36□□□□□ -1.07
SAMSN1-202ENST00000400564 IVNS1ABPQ9Y6Y0 642 aa8.36□□□□□ -1.07
SAMSN1-202ENST00000400564 KRTAP9-6A0A140TA67 174 aa8.35□□□□□ -1.07
SAMSN1-202ENST00000400564 SOWAHDA6NJG2 315 aa8.35□□□□□ -1.07
SAMSN1-202ENST00000400564 COL9A3Q14050 684 aaPredicted RBP8.35□□□□□ -1.07
SAMSN1-202ENST00000400564 PERM1Q5SV97 790 aa8.35□□□□□ -1.07
SAMSN1-202ENST00000400564 OR13H1Q8NG92 308 aa8.35□□□□□ -1.07
SAMSN1-202ENST00000400564 LPIN3Q9BQK8 851 aa8.35□□□□□ -1.07
SAMSN1-202ENST00000400564 JPH1Q9HDC5 661 aaPredicted RBP8.35□□□□□ -1.07
SAMSN1-202ENST00000400564 CNTN3Q9P232 1028 aa8.35□□□□□ -1.07
SAMSN1-202ENST00000400564 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.35□□□□□ -1.07
SAMSN1-202ENST00000400564 FURINP09958 794 aa8.35□□□□□ -1.07
SAMSN1-202ENST00000400564 PCSK2P16519 638 aa8.35□□□□□ -1.07
SAMSN1-202ENST00000400564 TTC39BQ5VTQ0 682 aaPredicted RBP8.35□□□□□ -1.07
SAMSN1-202ENST00000400564 PDE12Q6L8Q7 609 aaKnown RBP8.35□□□□□ -1.07
SAMSN1-202ENST00000400564 LOC102724428A0A0B4J2F2 783 aa8.34□□□□□ -1.07
SAMSN1-202ENST00000400564 GNB5O14775 395 aa8.34□□□□□ -1.07
SAMSN1-202ENST00000400564 EIF2AK2P19525 551 aaKnown RBP8.34□□□□□ -1.07
SAMSN1-202ENST00000400564 COL8A1P27658 744 aa8.34□□□□□ -1.07
SAMSN1-202ENST00000400564 SOX18P35713 384 aa8.34□□□□□ -1.07
SAMSN1-202ENST00000400564 SIK1P57059 783 aa8.34□□□□□ -1.07
SAMSN1-202ENST00000400564 C1orf127Q8N9H9 656 aa8.34□□□□□ -1.07
SAMSN1-202ENST00000400564 KANSL3Q9P2N6 904 aa8.34□□□□□ -1.07
SAMSN1-202ENST00000400564 RPLP1P05386 114 aaKnown RBP8.33□□□□□ -1.08
SAMSN1-202ENST00000400564 NID1P14543 1247 aa8.33□□□□□ -1.08
SAMSN1-202ENST00000400564 PCSK7Q16549 785 aa8.33□□□□□ -1.08
SAMSN1-202ENST00000400564 XKR5Q6UX68 686 aa8.33□□□□□ -1.08
SAMSN1-202ENST00000400564 GJD3Q8N144 294 aa8.33□□□□□ -1.08
SAMSN1-202ENST00000400564 TTC16Q8NEE8 873 aa8.33□□□□□ -1.08
SAMSN1-202ENST00000400564 SMG9Q9H0W8 520 aaKnown RBP8.33□□□□□ -1.08
SAMSN1-202ENST00000400564 FOXD3Q9UJU5 478 aaPredicted RBP8.33□□□□□ -1.08
SAMSN1-202ENST00000400564 KRBA1A5PL33 1030 aa8.32□□□□□ -1.08
SAMSN1-202ENST00000400564 LILRB5O75023 590 aa8.32□□□□□ -1.08
SAMSN1-202ENST00000400564 RGS9O75916 674 aaPredicted RBP8.32□□□□□ -1.08
SAMSN1-202ENST00000400564 HOXD8P13378 290 aaPredicted RBP8.32□□□□□ -1.08
SAMSN1-202ENST00000400564 PDIA4P13667 645 aaKnown RBP8.32□□□□□ -1.08
SAMSN1-202ENST00000400564 KCNA1Q09470 495 aa8.32□□□□□ -1.08
SAMSN1-202ENST00000400564 ELMSAN1Q6PJG2 1045 aa8.32□□□□□ -1.08
SAMSN1-202ENST00000400564 PLVAPQ9BX97 442 aa8.32□□□□□ -1.08
SAMSN1-202ENST00000400564 CHRDQ9H2X0 955 aa8.32□□□□□ -1.08
SAMSN1-202ENST00000400564 BRPF3Q9ULD4 1205 aa8.32□□□□□ -1.08
SAMSN1-202ENST00000400564 AFF1P51825 1210 aaKnown RBP8.31□□□□□ -1.08
SAMSN1-202ENST00000400564 GRIK5Q16478 980 aa8.31□□□□□ -1.08
SAMSN1-202ENST00000400564 PLD4Q96BZ4 506 aa8.31□□□□□ -1.08
SAMSN1-202ENST00000400564 PRDM6Q9NQX0 595 aa8.31□□□□□ -1.08
SAMSN1-202ENST00000400564 BIN2Q9UBW5 565 aaPredicted RBP8.31□□□□□ -1.08
SAMSN1-202ENST00000400564 TNFRSF21O75509 655 aa8.3□□□□□ -1.08
SAMSN1-202ENST00000400564 GHRHP01286 108 aa8.3□□□□□ -1.08
SAMSN1-202ENST00000400564 ACPPP15309 386 aa8.3□□□□□ -1.08
SAMSN1-202ENST00000400564 USP5P45974 858 aa8.3□□□□□ -1.08
SAMSN1-202ENST00000400564 ATP11AP98196 1134 aa8.3□□□□□ -1.08
SAMSN1-202ENST00000400564 KRTAP1-3Q8IUG1 177 aa8.3□□□□□ -1.08
SAMSN1-202ENST00000400564 AEBP1Q8IUX7 1158 aa8.3□□□□□ -1.08
SAMSN1-202ENST00000400564 FRRS1LQ9P0K9 344 aa8.3□□□□□ -1.08
SAMSN1-202ENST00000400564 FAM229AH3BQW9 127 aa8.29□□□□□ -1.08
SAMSN1-202ENST00000400564 EREGO14944 169 aa8.29□□□□□ -1.08
SAMSN1-202ENST00000400564 NDUFB5O43674 189 aa8.29□□□□□ -1.08
SAMSN1-202ENST00000400564 KIF4AO95239 1232 aa8.29□□□□□ -1.08
SAMSN1-202ENST00000400564 HYAL2Q12891 473 aa8.29□□□□□ -1.08
SAMSN1-202ENST00000400564 CES1P23141 567 aa8.28□□□□□ -1.08
SAMSN1-202ENST00000400564 EHHADHQ08426 723 aa8.28□□□□□ -1.08
SAMSN1-202ENST00000400564 TRIM33Q9UPN9 1127 aa8.28□□□□□ -1.08
SAMSN1-202ENST00000400564 PIK3R2O00459 728 aa8.27□□□□□ -1.09
SAMSN1-202ENST00000400564 PHACTR2O75167 634 aa8.27□□□□□ -1.09
SAMSN1-202ENST00000400564 ADAMTSL4Q6UY14 1074 aa8.27□□□□□ -1.09
SAMSN1-202ENST00000400564 NCAPG2Q86XI2 1143 aa8.27□□□□□ -1.09
SAMSN1-202ENST00000400564 DMRTC2Q8IXT2 367 aaPredicted RBP8.27□□□□□ -1.09
SAMSN1-202ENST00000400564 SNX29Q8TEQ0 813 aa8.27□□□□□ -1.09
SAMSN1-202ENST00000400564 FAM129BQ96TA1 746 aa8.27□□□□□ -1.09
SAMSN1-202ENST00000400564 RASSF4Q9H2L5 321 aa8.27□□□□□ -1.09
SAMSN1-202ENST00000400564 SALL4Q9UJQ4 1053 aa8.27□□□□□ -1.09
SAMSN1-202ENST00000400564 TRPA1O75762 1119 aa8.26□□□□□ -1.09
SAMSN1-202ENST00000400564 IGHA2P01877 340 aa8.26□□□□□ -1.09
SAMSN1-202ENST00000400564 TRAPPC3LQ5T215 181 aa8.26□□□□□ -1.09
SAMSN1-202ENST00000400564 GDF6Q6KF10 455 aaPredicted RBP8.26□□□□□ -1.09
SAMSN1-202ENST00000400564 RBSNQ9H1K0 784 aa8.26□□□□□ -1.09
SAMSN1-202ENST00000400564 NOP53Q9NZM5 478 aaKnown RBP8.26□□□□□ -1.09
SAMSN1-202ENST00000400564 GPR182O15218 404 aa8.25□□□□□ -1.09
SAMSN1-202ENST00000400564 MSL1Q68DK7 614 aa8.25□□□□□ -1.09
SAMSN1-202ENST00000400564 CEP120Q8N960 986 aa8.25□□□□□ -1.09
SAMSN1-202ENST00000400564 TMC1Q8TDI8 760 aa8.25□□□□□ -1.09
SAMSN1-202ENST00000400564 TTC9Q92623 222 aa8.25□□□□□ -1.09
SAMSN1-202ENST00000400564 SPACA7Q96KW9 195 aa8.25□□□□□ -1.09
SAMSN1-202ENST00000400564 POLR3DP05423 398 aaPredicted RBP8.24□□□□□ -1.09
SAMSN1-202ENST00000400564 ORC1Q13415 861 aa8.24□□□□□ -1.09
SAMSN1-202ENST00000400564 USPL1Q5W0Q7 1092 aa8.24□□□□□ -1.09
SAMSN1-202ENST00000400564 CEP135Q66GS9 1140 aa8.24□□□□□ -1.09
SAMSN1-202ENST00000400564 ILDR2Q71H61 639 aa8.24□□□□□ -1.09
SAMSN1-202ENST00000400564 ZFYVE28Q9HCC9 887 aa8.24□□□□□ -1.09
SAMSN1-202ENST00000400564 MAPK1P28482 360 aa8.23□□□□□ -1.09
SAMSN1-202ENST00000400564 HHIPQ96QV1 700 aa8.23□□□□□ -1.09
SAMSN1-202ENST00000400564 NIF3L1Q9GZT8 377 aa8.23□□□□□ -1.09
SAMSN1-202ENST00000400564 LACRTQ9GZZ8 138 aa8.23□□□□□ -1.09
SAMSN1-202ENST00000400564 LATS2Q9NRM7 1088 aa8.23□□□□□ -1.09
SAMSN1-202ENST00000400564 DCTN4Q9UJW0 460 aa8.23□□□□□ -1.09
SAMSN1-202ENST00000400564 A0A0A0MRY4 1105 aa8.22□□□□□ -1.09
SAMSN1-202ENST00000400564 TMC7Q7Z402 723 aa8.22□□□□□ -1.09
SAMSN1-202ENST00000400564 WFDC8Q8IUA0 241 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms