RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 NEUROD6Q96NK8 337 aa12.82□□□□□ -0.36
LINC00649-202ENST00000400353 PAG1Q9NWQ8 432 aa12.82□□□□□ -0.36
LINC00649-202ENST00000400353 ABCC12Q96J65 1359 aa12.81□□□□□ -0.36
LINC00649-202ENST00000400353 EXOC5O00471 708 aa12.81□□□□□ -0.36
LINC00649-202ENST00000400353 GIGYF2Q6Y7W6 1299 aaKnown RBP12.81□□□□□ -0.36
LINC00649-202ENST00000400353 ZNF589Q86UQ0 364 aaPredicted RBP12.81□□□□□ -0.36
LINC00649-202ENST00000400353 PANK2Q9BZ23 570 aa12.81□□□□□ -0.36
LINC00649-202ENST00000400353 ASAP1Q9ULH1 1129 aa12.81□□□□□ -0.36
LINC00649-202ENST00000400353 PHF14O94880 888 aa12.81□□□□□ -0.36
LINC00649-202ENST00000400353 F13A1P00488 732 aa12.81□□□□□ -0.36
LINC00649-202ENST00000400353 CSF1RP07333 972 aa12.81□□□□□ -0.36
LINC00649-202ENST00000400353 CPA1P15085 419 aa12.81□□□□□ -0.36
LINC00649-202ENST00000400353 PDCP20941 246 aa12.81□□□□□ -0.36
LINC00649-202ENST00000400353 SYT1P21579 422 aa12.81□□□□□ -0.36
LINC00649-202ENST00000400353 CCDC173Q0VFZ6 552 aa12.81□□□□□ -0.36
LINC00649-202ENST00000400353 HMGB1P09429 215 aaKnown RBP12.8□□□□□ -0.36
LINC00649-202ENST00000400353 IFIT1P09914 478 aaKnown RBP12.8□□□□□ -0.36
LINC00649-202ENST00000400353 GJB2P29033 226 aa12.8□□□□□ -0.36
LINC00649-202ENST00000400353 NASPP49321 788 aaPredicted RBP12.8□□□□□ -0.36
LINC00649-202ENST00000400353 EDC3Q96F86 508 aaKnown RBP12.8□□□□□ -0.36
LINC00649-202ENST00000400353 DSCC1Q9BVC3 393 aa12.8□□□□□ -0.36
LINC00649-202ENST00000400353 A0A1B0GUL7 405 aa12.79□□□□□ -0.36
LINC00649-202ENST00000400353 LARGE1O95461 756 aa12.79□□□□□ -0.36
LINC00649-202ENST00000400353 ME3Q16798 604 aa12.79□□□□□ -0.36
LINC00649-202ENST00000400353 LRRC24Q50LG9 513 aa12.79□□□□□ -0.36
LINC00649-202ENST00000400353 CCDC158Q5M9N0 1113 aa12.79□□□□□ -0.36
LINC00649-202ENST00000400353 LRSAM1Q6UWE0 723 aa12.79□□□□□ -0.36
LINC00649-202ENST00000400353 THRAP3Q9Y2W1 955 aaKnown RBP12.79□□□□□ -0.36
LINC00649-202ENST00000400353 ERVV-1B6SEH8 477 aa12.79□□□□□ -0.36
LINC00649-202ENST00000400353 CYP19A1P11511 503 aaPredicted RBP12.79□□□□□ -0.36
LINC00649-202ENST00000400353 IFIT5Q13325 482 aaKnown RBP12.79□□□□□ -0.36
LINC00649-202ENST00000400353 TPRNQ4KMQ1 711 aa12.79□□□□□ -0.36
LINC00649-202ENST00000400353 ZMYM1Q5SVZ6 1142 aa12.79□□□□□ -0.36
LINC00649-202ENST00000400353 DDX46Q7L014 1031 aaKnown RBP12.79□□□□□ -0.36
LINC00649-202ENST00000400353 C8orf37Q96NL8 207 aa12.79□□□□□ -0.36
LINC00649-202ENST00000400353 NEK1Q96PY6 1258 aa12.79□□□□□ -0.36
LINC00649-202ENST00000400353 TPCN1Q9ULQ1 816 aa12.79□□□□□ -0.36
LINC00649-202ENST00000400353 ANKRD36CQ5JPF3 1778 aa12.79□□□□□ -0.36
LINC00649-202ENST00000400353 GOLIM4O00461 696 aa12.78□□□□□ -0.36
LINC00649-202ENST00000400353 RNF113AO15541 343 aaKnown RBP12.78□□□□□ -0.36
LINC00649-202ENST00000400353 ZFYP08048 801 aaPredicted RBP12.78□□□□□ -0.36
LINC00649-202ENST00000400353 TEX2Q8IWB9 1127 aa12.78□□□□□ -0.36
LINC00649-202ENST00000400353 BBXQ8WY36 941 aaPredicted RBP12.78□□□□□ -0.36
LINC00649-202ENST00000400353 ZNF330Q9Y3S2 320 aaPredicted RBP12.78□□□□□ -0.36
LINC00649-202ENST00000400353 LETM1O95202 739 aaPredicted RBP12.77□□□□□ -0.36
LINC00649-202ENST00000400353 TIMM10P62072 90 aa12.77□□□□□ -0.36
LINC00649-202ENST00000400353 TTC39AQ5SRH9 613 aa12.77□□□□□ -0.36
LINC00649-202ENST00000400353 USP48Q86UV5 1035 aa12.77□□□□□ -0.36
LINC00649-202ENST00000400353 CHMP4CQ96CF2 233 aa12.77□□□□□ -0.36
LINC00649-202ENST00000400353 ZNF594Q96JF6 807 aaPredicted RBP12.77□□□□□ -0.36
LINC00649-202ENST00000400353 PPP1R9BQ96SB3 815 aa12.77□□□□□ -0.36
LINC00649-202ENST00000400353 TMEM63CQ9P1W3 806 aa12.77□□□□□ -0.36
LINC00649-202ENST00000400353 MTMR6Q9Y217 621 aa12.77□□□□□ -0.36
LINC00649-202ENST00000400353 IL6STP40189 918 aaPredicted RBP12.77□□□□□ -0.37
LINC00649-202ENST00000400353 GORABQ5T7V8 394 aa12.77□□□□□ -0.37
LINC00649-202ENST00000400353 NLRP10Q86W26 655 aa12.77□□□□□ -0.37
LINC00649-202ENST00000400353 TRIM44Q96DX7 344 aaPredicted RBP12.77□□□□□ -0.37
LINC00649-202ENST00000400353 AK7Q96M32 723 aa12.77□□□□□ -0.37
LINC00649-202ENST00000400353 LARP6Q9BRS8 491 aaKnown RBP12.77□□□□□ -0.37
LINC00649-202ENST00000400353 RBM27Q9P2N5 1060 aaKnown RBP12.77□□□□□ -0.37
LINC00649-202ENST00000400353 GTF2E1P29083 439 aaPredicted RBP12.76□□□□□ -0.37
LINC00649-202ENST00000400353 UBE2HP62256 183 aa12.76□□□□□ -0.37
LINC00649-202ENST00000400353 ST3GAL1Q11201 340 aa12.76□□□□□ -0.37
LINC00649-202ENST00000400353 TOB2Q14106 344 aaPredicted RBP12.76□□□□□ -0.37
LINC00649-202ENST00000400353 PRDM4Q9UKN5 801 aa12.76□□□□□ -0.37
LINC00649-202ENST00000400353 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.76□□□□□ -0.37
LINC00649-202ENST00000400353 ANKRD18BA2A2Z9 1011 aa12.76□□□□□ -0.37
LINC00649-202ENST00000400353 ILDR1Q86SU0 546 aaPredicted RBP12.76□□□□□ -0.37
LINC00649-202ENST00000400353 NGLY1Q96IV0 654 aa12.76□□□□□ -0.37
LINC00649-202ENST00000400353 ZFP91Q96JP5 570 aaPredicted RBP12.76□□□□□ -0.37
LINC00649-202ENST00000400353 PUS3Q9BZE2 481 aaKnown RBP12.76□□□□□ -0.37
LINC00649-202ENST00000400353 CTSWP56202 376 aa12.75□□□□□ -0.37
LINC00649-202ENST00000400353 LARP1BQ659C4 914 aaKnown RBP12.75□□□□□ -0.37
LINC00649-202ENST00000400353 CCDC129Q6ZRS4 1044 aa12.75□□□□□ -0.37
LINC00649-202ENST00000400353 FAM89AQ96GI7 184 aa12.75□□□□□ -0.37
LINC00649-202ENST00000400353 XAGE2Q96GT9 111 aa12.75□□□□□ -0.37
LINC00649-202ENST00000400353 NRAPQ86VF7 1730 aa12.75□□□□□ -0.37
LINC00649-202ENST00000400353 SPATA31A6Q5VVP1 1343 aa12.75□□□□□ -0.37
LINC00649-202ENST00000400353 PDE8AO60658 829 aa12.74□□□□□ -0.37
LINC00649-202ENST00000400353 CYP21A2P08686 494 aa12.74□□□□□ -0.37
LINC00649-202ENST00000400353 CCDC183Q5T5S1 534 aa12.74□□□□□ -0.37
LINC00649-202ENST00000400353 NECAB1Q8N987 351 aa12.74□□□□□ -0.37
LINC00649-202ENST00000400353 CHAMP1Q96JM3 812 aa12.74□□□□□ -0.37
LINC00649-202ENST00000400353 ZNF512BQ96KM6 892 aaPredicted RBP12.74□□□□□ -0.37
LINC00649-202ENST00000400353 SEC62Q99442 399 aaKnown RBP12.74□□□□□ -0.37
LINC00649-202ENST00000400353 CTNNA3Q9UI47 895 aa12.74□□□□□ -0.37
LINC00649-202ENST00000400353 CNPY2Q9Y2B0 182 aa12.74□□□□□ -0.37
LINC00649-202ENST00000400353 NDUFB9Q9Y6M9 179 aa12.74□□□□□ -0.37
LINC00649-202ENST00000400353 CICQ96RK0 1608 aaPredicted RBP12.74□□□□□ -0.37
LINC00649-202ENST00000400353 DOT1LQ8TEK3 1739 aa12.74□□□□□ -0.37
LINC00649-202ENST00000400353 PRIM1P49642 420 aaKnown RBP12.74□□□□□ -0.37
LINC00649-202ENST00000400353 MEX3CQ5U5Q3 659 aaKnown RBP12.74□□□□□ -0.37
LINC00649-202ENST00000400353 ZSCAN25Q6NSZ9 544 aa12.74□□□□□ -0.37
LINC00649-202ENST00000400353 TTLL11Q8NHH1 800 aa12.74□□□□□ -0.37
LINC00649-202ENST00000400353 GTF3C6Q969F1 213 aa12.74□□□□□ -0.37
LINC00649-202ENST00000400353 LLPHQ9BRT6 129 aaKnown RBP12.74□□□□□ -0.37
LINC00649-202ENST00000400353 TSPY26PQ9H489 355 aa12.74□□□□□ -0.37
LINC00649-202ENST00000400353 NSFL1CQ9UNZ2 370 aaKnown RBP12.74□□□□□ -0.37
LINC00649-202ENST00000400353 RIC1Q4ADV7 1423 aa12.73□□□□□ -0.37
LINC00649-202ENST00000400353 SYCE3A1L190 88 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms