RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 CSPG5O95196 566 aa15.71■□□□□ 0.11
VAPA-202ENST00000400000 DDX23Q9BUQ8 820 aaKnown RBP15.71■□□□□ 0.11
VAPA-202ENST00000400000 MEIS3Q99687 375 aa15.71■□□□□ 0.11
VAPA-202ENST00000400000 CCDC175P0C221 793 aa15.71■□□□□ 0.11
VAPA-202ENST00000400000 TAF12Q16514 161 aa15.71■□□□□ 0.11
VAPA-202ENST00000400000 DZIP3Q86Y13 1208 aaKnown RBP15.71■□□□□ 0.11
VAPA-202ENST00000400000 NLRP3Q96P20 1036 aa15.71■□□□□ 0.11
VAPA-202ENST00000400000 ADGRL1O94910 1474 aa15.71■□□□□ 0.11
VAPA-202ENST00000400000 GNG11P61952 73 aa15.71■□□□□ 0.11
VAPA-202ENST00000400000 SLC9C2Q5TAH2 1124 aa15.71■□□□□ 0.11
VAPA-202ENST00000400000 SYKP43405 635 aa15.71■□□□□ 0.11
VAPA-202ENST00000400000 ACTN2P35609 894 aa15.71■□□□□ 0.1
VAPA-202ENST00000400000 TNNI2P48788 182 aa15.71■□□□□ 0.1
VAPA-202ENST00000400000 SNW1Q13573 536 aaKnown RBP15.71■□□□□ 0.1
VAPA-202ENST00000400000 RTN1Q16799 776 aa15.71■□□□□ 0.1
VAPA-202ENST00000400000 NFATC2IPQ8NCF5 419 aa15.71■□□□□ 0.1
VAPA-202ENST00000400000 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.71■□□□□ 0.1
VAPA-202ENST00000400000 V9GYY5 206 aaPredicted RBP15.71■□□□□ 0.1
VAPA-202ENST00000400000 FAM135AQ9P2D6 1515 aa15.7■□□□□ 0.1
VAPA-202ENST00000400000 NOS1P29475 1434 aa15.7■□□□□ 0.1
VAPA-202ENST00000400000 SORBS3O60504 671 aa15.7■□□□□ 0.1
VAPA-202ENST00000400000 ASIC1P78348 528 aa15.7■□□□□ 0.1
VAPA-202ENST00000400000 MRRFQ96E11 262 aaKnown RBP15.7■□□□□ 0.1
VAPA-202ENST00000400000 TAOK3Q9H2K8 898 aa15.7■□□□□ 0.1
VAPA-202ENST00000400000 LRPPRCP42704 1394 aaKnown RBP15.7■□□□□ 0.1
VAPA-202ENST00000400000 ZBTB43O43298 467 aa15.7■□□□□ 0.1
VAPA-202ENST00000400000 CHMP2AO43633 222 aa15.7■□□□□ 0.1
VAPA-202ENST00000400000 PLEKHH2Q8IVE3 1493 aa15.7■□□□□ 0.1
VAPA-202ENST00000400000 ERCC3P19447 782 aa15.7■□□□□ 0.1
VAPA-202ENST00000400000 TROQ12816 1431 aaPredicted RBP15.7■□□□□ 0.1
VAPA-202ENST00000400000 MAGEB6P1A0A0J9YX57 407 aa15.7■□□□□ 0.1
VAPA-202ENST00000400000 ATXN8OSP0DMR3 200 aa15.7■□□□□ 0.1
VAPA-202ENST00000400000 PSMC4P43686 418 aa15.7■□□□□ 0.1
VAPA-202ENST00000400000 LMBR1LQ6UX01 489 aa15.7■□□□□ 0.1
VAPA-202ENST00000400000 SYNJ1O43426 1573 aa15.7■□□□□ 0.1
VAPA-202ENST00000400000 IRX5P78411 483 aaPredicted RBP15.7■□□□□ 0.1
VAPA-202ENST00000400000 MPHOSPH6Q99547 160 aaKnown RBP15.7■□□□□ 0.1
VAPA-202ENST00000400000 HCLS1P14317 486 aaPredicted RBP15.69■□□□□ 0.1
VAPA-202ENST00000400000 UBASH3AP57075 661 aa15.69■□□□□ 0.1
VAPA-202ENST00000400000 MCM5P33992 734 aa15.69■□□□□ 0.1
VAPA-202ENST00000400000 PLCB3Q01970 1234 aa15.69■□□□□ 0.1
VAPA-202ENST00000400000 KIAA0753Q2KHM9 967 aa15.69■□□□□ 0.1
VAPA-202ENST00000400000 STXBP4Q6ZWJ1 553 aa15.69■□□□□ 0.1
VAPA-202ENST00000400000 JDP2Q8WYK2 163 aa15.69■□□□□ 0.1
VAPA-202ENST00000400000 GNPATO15228 680 aa15.69■□□□□ 0.1
VAPA-202ENST00000400000 MCM9Q9NXL9 1143 aa15.69■□□□□ 0.1
VAPA-202ENST00000400000 AKR1B10O60218 316 aa15.69■□□□□ 0.1
VAPA-202ENST00000400000 ANO6Q4KMQ2 910 aa15.69■□□□□ 0.1
VAPA-202ENST00000400000 DDX17Q92841 729 aaKnown RBP15.69■□□□□ 0.1
VAPA-202ENST00000400000 GSTO1P78417 241 aa15.69■□□□□ 0.1
VAPA-202ENST00000400000 CCDC102BQ68D86 513 aa15.68■□□□□ 0.1
VAPA-202ENST00000400000 LRSAM1Q6UWE0 723 aa15.68■□□□□ 0.1
VAPA-202ENST00000400000 TTC21AQ8NDW8 1320 aa15.68■□□□□ 0.1
VAPA-202ENST00000400000 LMOD1P29536 600 aaPredicted RBP15.68■□□□□ 0.1
VAPA-202ENST00000400000 SMARCC1Q92922 1105 aaPredicted RBP15.68■□□□□ 0.1
VAPA-202ENST00000400000 SPAG5Q96R06 1193 aa15.68■□□□□ 0.1
VAPA-202ENST00000400000 GBP3Q9H0R5 595 aa15.68■□□□□ 0.1
VAPA-202ENST00000400000 RTCBQ9Y3I0 505 aaKnown RBP15.68■□□□□ 0.1
VAPA-202ENST00000400000 PPP4R3BQ5MIZ7 849 aa15.68■□□□□ 0.1
VAPA-202ENST00000400000 EAPPQ56P03 285 aaPredicted RBP15.68■□□□□ 0.1
VAPA-202ENST00000400000 DDX39AO00148 427 aaKnown RBP15.68■□□□□ 0.1
VAPA-202ENST00000400000 ZNF165P49910 485 aa15.68■□□□□ 0.1
VAPA-202ENST00000400000 CWF19L2Q2TBE0 894 aaKnown RBP15.68■□□□□ 0.1
VAPA-202ENST00000400000 ALDH1L2Q3SY69 923 aa15.68■□□□□ 0.1
VAPA-202ENST00000400000 DNAJC21Q5F1R6 531 aaKnown RBP15.68■□□□□ 0.1
VAPA-202ENST00000400000 ZSCAN30Q86W11 494 aa15.68■□□□□ 0.1
VAPA-202ENST00000400000 ZC3H12CQ9C0D7 883 aaKnown RBP15.68■□□□□ 0.1
VAPA-202ENST00000400000 GPCPD1Q9NPB8 672 aa15.68■□□□□ 0.1
VAPA-202ENST00000400000 NKTRP30414 1462 aaKnown RBP15.68■□□□□ 0.1
VAPA-202ENST00000400000 IFT140Q96RY7 1462 aa15.68■□□□□ 0.1
VAPA-202ENST00000400000 CCDC25Q86WR0 208 aa15.67■□□□□ 0.1
VAPA-202ENST00000400000 CEP135Q66GS9 1140 aa15.67■□□□□ 0.1
VAPA-202ENST00000400000 MSL1Q68DK7 614 aa15.67■□□□□ 0.1
VAPA-202ENST00000400000 ZNF804AQ7Z570 1209 aa15.67■□□□□ 0.1
VAPA-202ENST00000400000 BACH1O14867 736 aa15.67■□□□□ 0.1
VAPA-202ENST00000400000 SH3BP5O60239 455 aa15.67■□□□□ 0.1
VAPA-202ENST00000400000 KRT24Q2M2I5 525 aa15.67■□□□□ 0.1
VAPA-202ENST00000400000 DNAJC5BQ9UF47 199 aa15.67■□□□□ 0.1
VAPA-202ENST00000400000 FAM13AO94988 1023 aa15.67■□□□□ 0.1
VAPA-202ENST00000400000 KRT9P35527 623 aa15.67■□□□□ 0.1
VAPA-202ENST00000400000 APOBRQ0VD83 1088 aa15.67■□□□□ 0.1
VAPA-202ENST00000400000 DCAF17Q5H9S7 520 aaPredicted RBP15.67■□□□□ 0.1
VAPA-202ENST00000400000 AOPEPQ8N6M6 819 aa15.67■□□□□ 0.1
VAPA-202ENST00000400000 KARSQ15046 597 aaKnown RBP15.66■□□□□ 0.1
VAPA-202ENST00000400000 SELENOSQ9BQE4 189 aa15.66■□□□□ 0.1
VAPA-202ENST00000400000 PLB1Q6P1J6 1458 aa15.66■□□□□ 0.1
VAPA-202ENST00000400000 FAM114A1Q8IWE2 563 aa15.66■□□□□ 0.1
VAPA-202ENST00000400000 PKNOX2Q96KN3 472 aa15.66■□□□□ 0.1
VAPA-202ENST00000400000 CIZ1Q9ULV3 898 aaPredicted RBP15.66■□□□□ 0.1
VAPA-202ENST00000400000 RASA3Q14644 834 aa15.66■□□□□ 0.1
VAPA-202ENST00000400000 RBM8AQ9Y5S9 174 aaKnown RBP15.66■□□□□ 0.1
VAPA-202ENST00000400000 NDC80O14777 642 aa15.66■□□□□ 0.1
VAPA-202ENST00000400000 ABCC5O15440 1437 aa15.66■□□□□ 0.1
VAPA-202ENST00000400000 PPP2R5CQ13362 524 aa15.66■□□□□ 0.1
VAPA-202ENST00000400000 NAA15Q9BXJ9 866 aaKnown RBP15.66■□□□□ 0.1
VAPA-202ENST00000400000 DMRT2Q9Y5R5 561 aa15.66■□□□□ 0.1
VAPA-202ENST00000400000 RHPN1Q8TCX5 695 aa15.65■□□□□ 0.1
VAPA-202ENST00000400000 ZHX1Q9UKY1 873 aaPredicted RBP15.65■□□□□ 0.1
VAPA-202ENST00000400000 KRT5P13647 590 aa15.65■□□□□ 0.1
VAPA-202ENST00000400000 GIGYF2Q6Y7W6 1299 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms