RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 ZBTB3Q9H5J0 574 aa13.97□□□□□ -0.17
CACNA1C-219ENST00000399649 NESP48681 1621 aa13.97□□□□□ -0.17
CACNA1C-219ENST00000399649 RFC4P35249 363 aa13.97□□□□□ -0.17
CACNA1C-219ENST00000399649 FAM212AQ96EL1 285 aa13.97□□□□□ -0.17
CACNA1C-219ENST00000399649 KRT222Q8N1A0 295 aa13.97□□□□□ -0.17
CACNA1C-219ENST00000399649 ARFGAP3Q9NP61 516 aa13.97□□□□□ -0.17
CACNA1C-219ENST00000399649 RBM27Q9P2N5 1060 aaKnown RBP13.97□□□□□ -0.17
CACNA1C-219ENST00000399649 CALM1P0DP23 149 aa13.97□□□□□ -0.17
CACNA1C-219ENST00000399649 CALM2P0DP24 149 aa13.97□□□□□ -0.17
CACNA1C-219ENST00000399649 CALM3P0DP25 149 aa13.97□□□□□ -0.17
CACNA1C-219ENST00000399649 SMARCC2Q8TAQ2 1214 aa13.97□□□□□ -0.17
CACNA1C-219ENST00000399649 EXOC5O00471 708 aa13.96□□□□□ -0.17
CACNA1C-219ENST00000399649 CCDC152Q4G0S7 254 aa13.96□□□□□ -0.17
CACNA1C-219ENST00000399649 MAK16Q9BXY0 300 aaKnown RBP13.96□□□□□ -0.17
CACNA1C-219ENST00000399649 CNNM2Q9H8M5 875 aa13.96□□□□□ -0.17
CACNA1C-219ENST00000399649 CCDC61Q9Y6R9 512 aa13.96□□□□□ -0.17
CACNA1C-219ENST00000399649 EPRSP07814 1512 aaKnown RBP13.96□□□□□ -0.17
CACNA1C-219ENST00000399649 KRT83P78385 493 aa13.96□□□□□ -0.17
CACNA1C-219ENST00000399649 SPAG1Q07617 926 aa13.96□□□□□ -0.17
CACNA1C-219ENST00000399649 CEP83Q9Y592 693 aa13.96□□□□□ -0.17
CACNA1C-219ENST00000399649 TAF12Q16514 161 aa13.96□□□□□ -0.17
CACNA1C-219ENST00000399649 CCDC117Q8IWD4 279 aaPredicted RBP13.96□□□□□ -0.17
CACNA1C-219ENST00000399649 KCNG4Q8TDN1 519 aa13.96□□□□□ -0.17
CACNA1C-219ENST00000399649 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.96□□□□□ -0.17
CACNA1C-219ENST00000399649 CCT6BQ92526 530 aa13.96□□□□□ -0.17
CACNA1C-219ENST00000399649 B4DLN1 442 aa13.96□□□□□ -0.18
CACNA1C-219ENST00000399649 PSMA7O14818 248 aa13.96□□□□□ -0.18
CACNA1C-219ENST00000399649 MRPL12P52815 198 aaKnown RBP13.96□□□□□ -0.18
CACNA1C-219ENST00000399649 PLCB3Q01970 1234 aa13.96□□□□□ -0.18
CACNA1C-219ENST00000399649 SSH1Q8WYL5 1049 aa13.96□□□□□ -0.18
CACNA1C-219ENST00000399649 RARSP54136 660 aaKnown RBP13.96□□□□□ -0.18
CACNA1C-219ENST00000399649 ASIC1P78348 528 aa13.96□□□□□ -0.18
CACNA1C-219ENST00000399649 RTN1Q16799 776 aa13.96□□□□□ -0.18
CACNA1C-219ENST00000399649 TMTC2Q8N394 836 aa13.96□□□□□ -0.18
CACNA1C-219ENST00000399649 SEC62Q99442 399 aaKnown RBP13.96□□□□□ -0.18
CACNA1C-219ENST00000399649 ALG1Q9BT22 464 aa13.96□□□□□ -0.18
CACNA1C-219ENST00000399649 TRIM7Q9C029 511 aa13.96□□□□□ -0.18
CACNA1C-219ENST00000399649 NAIPQ13075 1403 aa13.96□□□□□ -0.18
CACNA1C-219ENST00000399649 CFTRP13569 1480 aa13.96□□□□□ -0.18
CACNA1C-219ENST00000399649 CRCPO75575 148 aa13.95□□□□□ -0.18
CACNA1C-219ENST00000399649 KLF18A0A0U1RQI7 1052 aa13.95□□□□□ -0.18
CACNA1C-219ENST00000399649 ZBTB43O43298 467 aa13.95□□□□□ -0.18
CACNA1C-219ENST00000399649 SNRKQ9NRH2 765 aa13.95□□□□□ -0.18
CACNA1C-219ENST00000399649 PTGS1P23219 599 aa13.95□□□□□ -0.18
CACNA1C-219ENST00000399649 ZSCAN23Q3MJ62 389 aa13.95□□□□□ -0.18
CACNA1C-219ENST00000399649 GOLGA1Q92805 767 aa13.95□□□□□ -0.18
CACNA1C-219ENST00000399649 STX8Q9UNK0 236 aa13.95□□□□□ -0.18
CACNA1C-219ENST00000399649 C6orf50Q9HD87 102 aa13.95□□□□□ -0.18
CACNA1C-219ENST00000399649 NAPAP54920 295 aa13.95□□□□□ -0.18
CACNA1C-219ENST00000399649 KIF5AQ12840 1032 aa13.95□□□□□ -0.18
CACNA1C-219ENST00000399649 ANO6Q4KMQ2 910 aa13.95□□□□□ -0.18
CACNA1C-219ENST00000399649 SLC4A4Q9Y6R1 1079 aa13.95□□□□□ -0.18
CACNA1C-219ENST00000399649 LRPPRCP42704 1394 aaKnown RBP13.94□□□□□ -0.18
CACNA1C-219ENST00000399649 JAKMIP2Q96AA8 810 aa13.94□□□□□ -0.18
CACNA1C-219ENST00000399649 DMRT2Q9Y5R5 561 aa13.94□□□□□ -0.18
CACNA1C-219ENST00000399649 GNAQP50148 359 aa13.94□□□□□ -0.18
CACNA1C-219ENST00000399649 PPP1R7Q15435 360 aa13.94□□□□□ -0.18
CACNA1C-219ENST00000399649 CCDC110Q8TBZ0 833 aa13.94□□□□□ -0.18
CACNA1C-219ENST00000399649 TCHPQ9BT92 498 aa13.94□□□□□ -0.18
CACNA1C-219ENST00000399649 CIB2O75838 187 aa13.94□□□□□ -0.18
CACNA1C-219ENST00000399649 ZSCAN22P10073 491 aaPredicted RBP13.94□□□□□ -0.18
CACNA1C-219ENST00000399649 ARID5AQ03989 594 aa13.94□□□□□ -0.18
CACNA1C-219ENST00000399649 ESR2Q92731 530 aa13.94□□□□□ -0.18
CACNA1C-219ENST00000399649 CCDC114Q96M63 670 aa13.94□□□□□ -0.18
CACNA1C-219ENST00000399649 SUPT6HQ7KZ85 1726 aaKnown RBP13.94□□□□□ -0.18
CACNA1C-219ENST00000399649 BICDL2A1A5D9 508 aa13.94□□□□□ -0.18
CACNA1C-219ENST00000399649 SMIM23A6NLE4 172 aa13.94□□□□□ -0.18
CACNA1C-219ENST00000399649 KCNK9Q9NPC2 374 aa13.94□□□□□ -0.18
CACNA1C-219ENST00000399649 PIK3R4Q99570 1358 aa13.94□□□□□ -0.18
CACNA1C-219ENST00000399649 EFCAB5A4FU69 1503 aa13.94□□□□□ -0.18
CACNA1C-219ENST00000399649 PLS1Q14651 629 aa13.93□□□□□ -0.18
CACNA1C-219ENST00000399649 SETDB1Q15047 1291 aa13.93□□□□□ -0.18
CACNA1C-219ENST00000399649 NEK11Q8NG66 645 aa13.93□□□□□ -0.18
CACNA1C-219ENST00000399649 TBC1D2Q9BYX2 928 aa13.93□□□□□ -0.18
CACNA1C-219ENST00000399649 DNAI1Q9UI46 699 aa13.93□□□□□ -0.18
CACNA1C-219ENST00000399649 CYP7A1P22680 504 aa13.93□□□□□ -0.18
CACNA1C-219ENST00000399649 GIMAP6Q6P9H5 292 aa13.93□□□□□ -0.18
CACNA1C-219ENST00000399649 MICALL1Q8N3F8 863 aa13.93□□□□□ -0.18
CACNA1C-219ENST00000399649 MCM6Q14566 821 aa13.93□□□□□ -0.18
CACNA1C-219ENST00000399649 TBC1D9Q6ZT07 1266 aa13.93□□□□□ -0.18
CACNA1C-219ENST00000399649 WDR66Q8TBY9 1149 aa13.93□□□□□ -0.18
CACNA1C-219ENST00000399649 KRT86O43790 486 aa13.93□□□□□ -0.18
CACNA1C-219ENST00000399649 FLIIQ13045 1269 aa13.93□□□□□ -0.18
CACNA1C-219ENST00000399649 TSGA10Q9BZW7 698 aa13.93□□□□□ -0.18
CACNA1C-219ENST00000399649 MTRF1LQ9UGC7 380 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-219ENST00000399649 CAMSAP2Q08AD1 1489 aa13.93□□□□□ -0.18
CACNA1C-219ENST00000399649 STIM2Q9P246 746 aa13.93□□□□□ -0.18
CACNA1C-219ENST00000399649 PPFIA3O75145 1194 aa13.92□□□□□ -0.18
CACNA1C-219ENST00000399649 SAMD15Q9P1V8 674 aa13.92□□□□□ -0.18
CACNA1C-219ENST00000399649 CAPZA3Q96KX2 299 aa13.92□□□□□ -0.18
CACNA1C-219ENST00000399649 ZHX1Q9UKY1 873 aaPredicted RBP13.92□□□□□ -0.18
CACNA1C-219ENST00000399649 ATP6V0A2Q9Y487 856 aa13.92□□□□□ -0.18
CACNA1C-219ENST00000399649 DHX29Q7Z478 1369 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-219ENST00000399649 PICALMQ13492 652 aa13.92□□□□□ -0.18
CACNA1C-219ENST00000399649 RTL9Q8NET4 1388 aa13.92□□□□□ -0.18
CACNA1C-219ENST00000399649 ATP5J2-PTCD1G3V325 749 aa13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 SKILP12757 684 aa13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 TTC22Q5TAA0 569 aa13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 NBPF6Q5VWK0 638 aa13.91□□□□□ -0.18
CACNA1C-219ENST00000399649 NBPF5PQ86XG9 351 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms