RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 MRPL46Q9H2W6 279 aaKnown RBP12.66□□□□□ -0.38
CACNA1C-208ENST00000399601 HSPA1LP34931 641 aa12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 ANKRD1Q15327 319 aa12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 AFG3L2Q9Y4W6 797 aa12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 CCDC7Q96M83 1385 aa12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 KIAA0753Q2KHM9 967 aa12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 CWC27Q6UX04 472 aaKnown RBP12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 SPC25Q9HBM1 224 aa12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 CPSF2Q9P2I0 782 aaKnown RBP12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 CCNL1Q9UK58 526 aaPredicted RBP12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 CEP131Q9UPN4 1083 aa12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 TOP1P11387 765 aaKnown RBP12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 KAT14Q9H8E8 782 aa12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 WDR46O15213 610 aaKnown RBP12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 IRX3P78415 501 aaPredicted RBP12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 IL1RL1Q01638 556 aa12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 FBXO31Q5XUX0 539 aaPredicted RBP12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 PSPC1Q8WXF1 523 aaKnown RBP12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 C16orf45Q96MC5 204 aaPredicted RBP12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 TRIM6Q9C030 488 aaPredicted RBP12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 CALCOCO1Q9P1Z2 691 aa12.65□□□□□ -0.38
CACNA1C-208ENST00000399601 SYCE3A1L190 88 aa12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 CDR2Q01850 454 aa12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 EXOSC9Q06265 439 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 NSFL1CQ9UNZ2 370 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 FAM169AQ9Y6X4 670 aa12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 PDCP20941 246 aa12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 OTUD7BQ6GQQ9 843 aa12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 LDHAL6AQ6ZMR3 332 aa12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 CACYBPQ9HB71 228 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 ATAD2Q6PL18 1390 aa12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 SMCR8Q8TEV9 937 aaPredicted RBP12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 PANK2Q9BZ23 570 aa12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 TSPYL2Q9H2G4 693 aaPredicted RBP12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 PDRG1Q9NUG6 133 aa12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 H7C1D1 291 aa12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 BIN1O00499 593 aa12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 SH2D4BQ5SQS7 431 aa12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 CRNKL1Q9BZJ0 848 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 PHACTR2O75167 634 aa12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 TRAF1Q13077 416 aa12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 RUFY3Q7L099 469 aa12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 JAKMIP1Q96N16 626 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 NSRP1Q9H0G5 558 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 GRPEL1Q9HAV7 217 aa12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 RBM27Q9P2N5 1060 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-208ENST00000399601 RIOK3O14730 519 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 FAM98CQ17RN3 349 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 VPS52Q8N1B4 723 aa12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 TCP11L2Q8N4U5 519 aa12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 RNF41Q9H4P4 317 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 HSP90AA4PQ58FG1 418 aa12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 ITM2BQ9Y287 266 aa12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 CIB2O75838 187 aa12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 ARID5AQ03989 594 aa12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 STXBP4Q6ZWJ1 553 aa12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 CATIPQ7Z7H3 387 aa12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 NBPF3Q9H094 633 aa12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 SUFUQ9UMX1 484 aa12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 MYCP01106 439 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 NIM1KQ8IY84 436 aa12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 CCDC12Q8WUD4 166 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 KRT85P78386 507 aa12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 PLCB3Q01970 1234 aa12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 ZNF772Q68DY9 489 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 CCDC114Q96M63 670 aa12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 LARP6Q9BRS8 491 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-208ENST00000399601 CCDC194A0A1B0GVG4 234 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 HOOK2Q96ED9 719 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 DISP3Q9P2K9 1392 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 MBD3O95983 291 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 KSR1Q8IVT5 923 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 NUF2Q9BZD4 464 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 CSPG5O95196 566 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 MCM3P25205 808 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 CABLES1Q8TDN4 633 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 TXNDC16Q9P2K2 825 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 NOC2LQ9Y3T9 749 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 KIF5BP33176 963 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 CETN1Q12798 172 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 RAB11FIP4Q86YS3 637 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 BTG4Q9NY30 223 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 CLIP2Q9UDT6 1046 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 WDR7Q9Y4E6 1490 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 ZNF853P0CG23 659 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 SKIV2LQ15477 1246 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 CTAGE6Q86UF2 777 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 FERMT3Q86UX7 667 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 TRIM7Q9C029 511 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 M0QZ92 97 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 TSPY3P0CV98 308 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 TSPY8P0CW00 308 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 TAF7Q15545 349 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 TMC6Q7Z403 805 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 ZBTB33Q86T24 672 aa12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 NAA15Q9BXJ9 866 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 ZBTB12Q9Y330 459 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-208ENST00000399601 FAM200AQ8TCP9 573 aa12.61□□□□□ -0.39
CACNA1C-208ENST00000399601 CHMP6Q96FZ7 201 aa12.61□□□□□ -0.39
CACNA1C-208ENST00000399601 CAPZA3Q96KX2 299 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms