RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 MARCKSP29966 332 aaPredicted RBP17.16■□□□□ 0.34
ITSN1-210ENST00000399353 ADKP55263 362 aaKnown RBP17.16■□□□□ 0.34
ITSN1-210ENST00000399353 MUM1L1Q5H9M0 696 aa17.16■□□□□ 0.34
ITSN1-210ENST00000399353 CNNM3Q8NE01 707 aa17.16■□□□□ 0.34
ITSN1-210ENST00000399353 H3BQF6 201 aa17.15■□□□□ 0.34
ITSN1-210ENST00000399353 USHBP1Q8N6Y0 703 aa17.15■□□□□ 0.34
ITSN1-210ENST00000399353 PTCH1Q13635 1447 aa17.15■□□□□ 0.34
ITSN1-210ENST00000399353 SAMD9LQ8IVG5 1584 aa17.15■□□□□ 0.34
ITSN1-210ENST00000399353 TADA3O75528 432 aa17.15■□□□□ 0.34
ITSN1-210ENST00000399353 CHMP4BP1P59074 171 aa17.15■□□□□ 0.34
ITSN1-210ENST00000399353 NMIQ13287 307 aaPredicted RBP17.15■□□□□ 0.34
ITSN1-210ENST00000399353 NBPF11Q86T75 865 aa17.15■□□□□ 0.34
ITSN1-210ENST00000399353 IRX2Q9BZI1 471 aaPredicted RBP17.15■□□□□ 0.34
ITSN1-210ENST00000399353 NCOA5Q9HCD5 579 aaKnown RBP17.15■□□□□ 0.34
ITSN1-210ENST00000399353 FANCAO15360 1455 aa17.15■□□□□ 0.34
ITSN1-210ENST00000399353 ATP10AO60312 1499 aa17.15■□□□□ 0.34
ITSN1-210ENST00000399353 TAF7Q15545 349 aaPredicted RBP17.15■□□□□ 0.34
ITSN1-210ENST00000399353 DHX58Q96C10 678 aa17.15■□□□□ 0.34
ITSN1-210ENST00000399353 ECM2O94769 699 aaPredicted RBP17.15■□□□□ 0.34
ITSN1-210ENST00000399353 CDC25BP30305 580 aa17.15■□□□□ 0.34
ITSN1-210ENST00000399353 TTC19Q6DKK2 380 aaPredicted RBP17.15■□□□□ 0.34
ITSN1-210ENST00000399353 HDXQ7Z353 690 aa17.15■□□□□ 0.34
ITSN1-210ENST00000399353 Q6ZUG5 572 aa17.14■□□□□ 0.33
ITSN1-210ENST00000399353 MTX1Q13505 466 aa17.14■□□□□ 0.33
ITSN1-210ENST00000399353 COL9A3Q14050 684 aaPredicted RBP17.14■□□□□ 0.33
ITSN1-210ENST00000399353 WDR24Q96S15 920 aa17.14■□□□□ 0.33
ITSN1-210ENST00000399353 HSP90AB4PQ58FF6 505 aa17.14■□□□□ 0.33
ITSN1-210ENST00000399353 ERLIN2O94905 339 aa17.13■□□□□ 0.33
ITSN1-210ENST00000399353 FAM160A1Q05DH4 1040 aa17.13■□□□□ 0.33
ITSN1-210ENST00000399353 MRPS27Q92552 414 aaKnown RBP17.13■□□□□ 0.33
ITSN1-210ENST00000399353 FAM107BQ9H098 131 aa17.13■□□□□ 0.33
ITSN1-210ENST00000399353 ZSWIM6Q9HCJ5 1215 aa17.13■□□□□ 0.33
ITSN1-210ENST00000399353 NDUFB9Q9Y6M9 179 aa17.13■□□□□ 0.33
ITSN1-210ENST00000399353 CPLX1O14810 134 aa17.13■□□□□ 0.33
ITSN1-210ENST00000399353 ZNF853P0CG23 659 aa17.13■□□□□ 0.33
ITSN1-210ENST00000399353 FAM204AQ9H8W3 233 aa17.13■□□□□ 0.33
ITSN1-210ENST00000399353 L2HGDHQ9H9P8 463 aa17.13■□□□□ 0.33
ITSN1-210ENST00000399353 PSDA5PKW4 1024 aaPredicted RBP17.13■□□□□ 0.33
ITSN1-210ENST00000399353 ZNF569Q5MCW4 686 aa17.13■□□□□ 0.33
ITSN1-210ENST00000399353 NEUROD6Q96NK8 337 aa17.13■□□□□ 0.33
ITSN1-210ENST00000399353 GOLPH3LQ9H4A5 285 aa17.13■□□□□ 0.33
ITSN1-210ENST00000399353 ECHDC1Q9NTX5 307 aa17.13■□□□□ 0.33
ITSN1-210ENST00000399353 SLC27A2O14975 620 aa17.12■□□□□ 0.33
ITSN1-210ENST00000399353 DHX40Q8IX18 779 aaKnown RBP17.12■□□□□ 0.33
ITSN1-210ENST00000399353 ATP6V1AP38606 617 aa17.12■□□□□ 0.33
ITSN1-210ENST00000399353 KLHL10Q6JEL2 608 aa17.12■□□□□ 0.33
ITSN1-210ENST00000399353 ERC1Q8IUD2 1116 aa17.12■□□□□ 0.33
ITSN1-210ENST00000399353 SEC62Q99442 399 aaKnown RBP17.12■□□□□ 0.33
ITSN1-210ENST00000399353 BAG1Q99933 345 aaPredicted RBP17.12■□□□□ 0.33
ITSN1-210ENST00000399353 PPP2R2CQ9Y2T4 447 aa17.12■□□□□ 0.33
ITSN1-210ENST00000399353 SOS1Q07889 1333 aaPredicted RBP17.12■□□□□ 0.33
ITSN1-210ENST00000399353 KIF5CO60282 957 aa17.12■□□□□ 0.33
ITSN1-210ENST00000399353 CCT5P48643 541 aa17.12■□□□□ 0.33
ITSN1-210ENST00000399353 APOBRQ0VD83 1088 aa17.12■□□□□ 0.33
ITSN1-210ENST00000399353 EDC3Q96F86 508 aaKnown RBP17.12■□□□□ 0.33
ITSN1-210ENST00000399353 CRACR2AQ9BSW2 395 aa17.12■□□□□ 0.33
ITSN1-210ENST00000399353 FAM135BQ49AJ0 1406 aa17.11■□□□□ 0.33
ITSN1-210ENST00000399353 ZRANB2O95218 330 aaKnown RBP eCLIP17.11■□□□□ 0.33
ITSN1-210ENST00000399353 RNF187Q5TA31 235 aaPredicted RBP17.11■□□□□ 0.33
ITSN1-210ENST00000399353 NFATC2IPQ8NCF5 419 aa17.11■□□□□ 0.33
ITSN1-210ENST00000399353 CXorf56Q9H5V9 222 aa17.11■□□□□ 0.33
ITSN1-210ENST00000399353 CBFA2T2O43439 604 aa17.11■□□□□ 0.33
ITSN1-210ENST00000399353 KIAA0754O94854 1291 aa17.11■□□□□ 0.33
ITSN1-210ENST00000399353 SARM1Q6SZW1 724 aa17.11■□□□□ 0.33
ITSN1-210ENST00000399353 CEP57Q86XR8 500 aa17.11■□□□□ 0.33
ITSN1-210ENST00000399353 JPH2Q9BR39 696 aaPredicted RBP17.11■□□□□ 0.33
ITSN1-210ENST00000399353 PHAXQ9H814 394 aaKnown RBP17.11■□□□□ 0.33
ITSN1-210ENST00000399353 BRMS1Q9HCU9 246 aa17.11■□□□□ 0.33
ITSN1-210ENST00000399353 ATP10DQ9P241 1426 aa17.1■□□□□ 0.33
ITSN1-210ENST00000399353 EBAG9O00559 213 aa17.1■□□□□ 0.33
ITSN1-210ENST00000399353 IL13P35225 146 aa17.1■□□□□ 0.33
ITSN1-210ENST00000399353 USP8P40818 1118 aa17.1■□□□□ 0.33
ITSN1-210ENST00000399353 EIF4A2Q14240 407 aaKnown RBP17.1■□□□□ 0.33
ITSN1-210ENST00000399353 LONRF3Q496Y0 759 aa17.1■□□□□ 0.33
ITSN1-210ENST00000399353 NOC3LQ8WTT2 800 aaKnown RBP17.1■□□□□ 0.33
ITSN1-210ENST00000399353 SIRT1Q96EB6 747 aa17.1■□□□□ 0.33
ITSN1-210ENST00000399353 IMPACTQ9P2X3 320 aa17.1■□□□□ 0.33
ITSN1-210ENST00000399353 TAF6LQ9Y6J9 622 aa17.1■□□□□ 0.33
ITSN1-210ENST00000399353 CDC42BPAQ5VT25 1732 aa17.1■□□□□ 0.33
ITSN1-210ENST00000399353 SSBP05455 408 aaKnown RBP eCLIP17.1■□□□□ 0.33
ITSN1-210ENST00000399353 ATP2B2Q01814 1243 aa17.1■□□□□ 0.33
ITSN1-210ENST00000399353 PPP2R5AQ15172 486 aa17.1■□□□□ 0.33
ITSN1-210ENST00000399353 FBXW10Q5XX13 1052 aa17.1■□□□□ 0.33
ITSN1-210ENST00000399353 CAGE1Q8TC20 777 aa17.1■□□□□ 0.33
ITSN1-210ENST00000399353 NEK1Q96PY6 1258 aa17.1■□□□□ 0.33
ITSN1-210ENST00000399353 ZSCAN16Q9H4T2 348 aaPredicted RBP17.1■□□□□ 0.33
ITSN1-210ENST00000399353 ABCB6Q9NP58 842 aa17.1■□□□□ 0.33
ITSN1-210ENST00000399353 FRMD3A2A2Y4 597 aa17.1■□□□□ 0.33
ITSN1-210ENST00000399353 GBP6Q6ZN66 633 aa17.1■□□□□ 0.33
ITSN1-210ENST00000399353 NBPF7P0C2Y1 421 aaPredicted RBP17.09■□□□□ 0.33
ITSN1-210ENST00000399353 PDE6BP35913 854 aa17.09■□□□□ 0.33
ITSN1-210ENST00000399353 REXO1L1PQ8IX06 675 aa17.09■□□□□ 0.33
ITSN1-210ENST00000399353 RIMS2Q9UQ26 1411 aa17.09■□□□□ 0.33
ITSN1-210ENST00000399353 WASLO00401 505 aaPredicted RBP17.09■□□□□ 0.33
ITSN1-210ENST00000399353 ZMYND10O75800 440 aa17.09■□□□□ 0.33
ITSN1-210ENST00000399353 NDUFA8P51970 172 aa17.09■□□□□ 0.33
ITSN1-210ENST00000399353 CHL1O00533 1208 aa17.09■□□□□ 0.33
ITSN1-210ENST00000399353 RIC3Q7Z5B4 369 aa17.09■□□□□ 0.33
ITSN1-210ENST00000399353 MPHOSPH8Q99549 860 aa17.09■□□□□ 0.33
ITSN1-210ENST00000399353 MED14O60244 1454 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms