RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 GNG11P61952 73 aa10.72□□□□□ -0.69
CDH23-203ENST00000398788 SLC39A6Q13433 755 aa10.72□□□□□ -0.69
CDH23-203ENST00000398788 FILIP1LQ4L180 1135 aa10.72□□□□□ -0.69
CDH23-203ENST00000398788 ANKRD24Q8TF21 1146 aa10.72□□□□□ -0.69
CDH23-203ENST00000398788 JPH2Q9BR39 696 aaPredicted RBP10.72□□□□□ -0.69
CDH23-203ENST00000398788 PPRC1Q5VV67 1664 aaKnown RBP10.72□□□□□ -0.69
CDH23-203ENST00000398788 ALDH1L2Q3SY69 923 aa10.72□□□□□ -0.69
CDH23-203ENST00000398788 PPP1R42Q7Z4L9 355 aa10.72□□□□□ -0.69
CDH23-203ENST00000398788 CCAR1Q8IX12 1150 aaKnown RBP10.72□□□□□ -0.69
CDH23-203ENST00000398788 CACTINQ8WUQ7 758 aaKnown RBP10.72□□□□□ -0.69
CDH23-203ENST00000398788 BLMP54132 1417 aaPredicted RBP10.72□□□□□ -0.69
CDH23-203ENST00000398788 EBAG9O00559 213 aa10.72□□□□□ -0.69
CDH23-203ENST00000398788 DDIT3P35638 169 aa10.72□□□□□ -0.69
CDH23-203ENST00000398788 PEX19P40855 299 aa10.72□□□□□ -0.69
CDH23-203ENST00000398788 NBPF11Q86T75 865 aa10.72□□□□□ -0.69
CDH23-203ENST00000398788 ZNF219Q9P2Y4 722 aaPredicted RBP10.72□□□□□ -0.69
CDH23-203ENST00000398788 TRMT112Q9UI30 125 aaKnown RBP10.72□□□□□ -0.69
CDH23-203ENST00000398788 BRD1O95696 1058 aa10.71□□□□□ -0.69
CDH23-203ENST00000398788 SLC4A8Q2Y0W8 1093 aa10.71□□□□□ -0.69
CDH23-203ENST00000398788 ODF2Q5BJF6 829 aa10.71□□□□□ -0.69
CDH23-203ENST00000398788 IFNL2Q8IZJ0 200 aa10.71□□□□□ -0.69
CDH23-203ENST00000398788 CALR3Q96L12 384 aaKnown RBP10.71□□□□□ -0.69
CDH23-203ENST00000398788 CBX8Q9HC52 389 aa10.71□□□□□ -0.69
CDH23-203ENST00000398788 DBF4Q9UBU7 674 aaPredicted RBP10.71□□□□□ -0.69
CDH23-203ENST00000398788 SHANK2Q9UPX8 1470 aa10.71□□□□□ -0.69
CDH23-203ENST00000398788 SDSP20132 328 aa10.71□□□□□ -0.69
CDH23-203ENST00000398788 IGHMBP2P38935 993 aaKnown RBP10.71□□□□□ -0.69
CDH23-203ENST00000398788 CEP57L1Q8IYX8 460 aa10.71□□□□□ -0.69
CDH23-203ENST00000398788 ECM2O94769 699 aaPredicted RBP10.71□□□□□ -0.7
CDH23-203ENST00000398788 KLHL10Q6JEL2 608 aa10.71□□□□□ -0.7
CDH23-203ENST00000398788 MMS22LQ6ZRQ5 1243 aa10.71□□□□□ -0.7
CDH23-203ENST00000398788 MAP3K2Q9Y2U5 619 aa10.71□□□□□ -0.7
CDH23-203ENST00000398788 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.71□□□□□ -0.7
CDH23-203ENST00000398788 TTC21AQ8NDW8 1320 aa10.71□□□□□ -0.7
CDH23-203ENST00000398788 CLNS1AP54105 237 aaKnown RBP10.7□□□□□ -0.7
CDH23-203ENST00000398788 TANGO6Q9C0B7 1094 aa10.7□□□□□ -0.7
CDH23-203ENST00000398788 CHRM1P11229 460 aaPredicted RBP10.7□□□□□ -0.7
CDH23-203ENST00000398788 PDE6BP35913 854 aa10.7□□□□□ -0.7
CDH23-203ENST00000398788 RBM6P78332 1123 aaKnown RBP10.7□□□□□ -0.7
CDH23-203ENST00000398788 IMMTQ16891 758 aaKnown RBP10.7□□□□□ -0.7
CDH23-203ENST00000398788 TRMT1LQ7Z2T5 733 aaKnown RBP10.7□□□□□ -0.7
CDH23-203ENST00000398788 C8orf58Q8NAV2 365 aa10.7□□□□□ -0.7
CDH23-203ENST00000398788 ATP10AO60312 1499 aa10.7□□□□□ -0.7
CDH23-203ENST00000398788 IFIT5Q13325 482 aaKnown RBP10.7□□□□□ -0.7
CDH23-203ENST00000398788 TTC22Q5TAA0 569 aa10.7□□□□□ -0.7
CDH23-203ENST00000398788 CNKSR2Q8WXI2 1034 aa10.7□□□□□ -0.7
CDH23-203ENST00000398788 ADAM21Q9UKJ8 722 aa10.7□□□□□ -0.7
CDH23-203ENST00000398788 GSDMDP57764 484 aa10.7□□□□□ -0.7
CDH23-203ENST00000398788 SOGA3Q5TF21 947 aa10.7□□□□□ -0.7
CDH23-203ENST00000398788 AP1ARQ63HQ0 302 aa10.7□□□□□ -0.7
CDH23-203ENST00000398788 CCDC144CPQ8IYA2 1237 aa10.7□□□□□ -0.7
CDH23-203ENST00000398788 PRPF38AQ8NAV1 312 aaKnown RBP10.7□□□□□ -0.7
CDH23-203ENST00000398788 CABLES1Q8TDN4 633 aa10.7□□□□□ -0.7
CDH23-203ENST00000398788 ZSCAN31Q96LW9 406 aaPredicted RBP10.7□□□□□ -0.7
CDH23-203ENST00000398788 MAGEC2Q9UBF1 373 aaPredicted RBP10.7□□□□□ -0.7
CDH23-203ENST00000398788 CFAP45Q9UL16 551 aa10.7□□□□□ -0.7
CDH23-203ENST00000398788 MRVI1Q9Y6F6 885 aa10.7□□□□□ -0.7
CDH23-203ENST00000398788 KIF1CO43896 1103 aaKnown RBP10.69□□□□□ -0.7
CDH23-203ENST00000398788 GCKP35557 465 aa10.69□□□□□ -0.7
CDH23-203ENST00000398788 KRT32Q14532 448 aa10.69□□□□□ -0.7
CDH23-203ENST00000398788 CRACR2AQ9BSW2 395 aa10.69□□□□□ -0.7
CDH23-203ENST00000398788 LRRC2Q9BYS8 371 aa10.69□□□□□ -0.7
CDH23-203ENST00000398788 ADGRL2O95490 1459 aa10.69□□□□□ -0.7
CDH23-203ENST00000398788 TMEM132AQ24JP5 1023 aa10.69□□□□□ -0.7
CDH23-203ENST00000398788 CLEC17AQ6ZS10 378 aa10.69□□□□□ -0.7
CDH23-203ENST00000398788 TSPYL6Q8N831 410 aa10.69□□□□□ -0.7
CDH23-203ENST00000398788 NAPBQ9H115 298 aa10.69□□□□□ -0.7
CDH23-203ENST00000398788 IQSEC3Q9UPP2 1182 aaPredicted RBP10.69□□□□□ -0.7
CDH23-203ENST00000398788 U3KPZ7 1027 aaPredicted RBP10.69□□□□□ -0.7
CDH23-203ENST00000398788 NSD2O96028 1365 aa10.69□□□□□ -0.7
CDH23-203ENST00000398788 RANBP6O60518 1105 aaKnown RBP10.69□□□□□ -0.7
CDH23-203ENST00000398788 ZPR1O75312 459 aa10.69□□□□□ -0.7
CDH23-203ENST00000398788 LDHAL6AQ6ZMR3 332 aa10.69□□□□□ -0.7
CDH23-203ENST00000398788 ZNF652Q9Y2D9 606 aa10.69□□□□□ -0.7
CDH23-203ENST00000398788 ZDHHC9Q9Y397 364 aa10.69□□□□□ -0.7
CDH23-203ENST00000398788 ADGBQ8N7X0 1667 aa10.69□□□□□ -0.7
CDH23-203ENST00000398788 KDM6BO15054 1643 aa10.68□□□□□ -0.7
CDH23-203ENST00000398788 INPP5BP32019 993 aa10.68□□□□□ -0.7
CDH23-203ENST00000398788 ARID5BQ14865 1188 aa10.68□□□□□ -0.7
CDH23-203ENST00000398788 CFAP100Q494V2 611 aa10.68□□□□□ -0.7
CDH23-203ENST00000398788 PIK3R5Q8WYR1 880 aa10.68□□□□□ -0.7
CDH23-203ENST00000398788 KIF2CQ99661 725 aa10.68□□□□□ -0.7
CDH23-203ENST00000398788 PUF60Q9UHX1 559 aaKnown RBP10.68□□□□□ -0.7
CDH23-203ENST00000398788 USP27XA6NNY8 438 aa10.68□□□□□ -0.7
CDH23-203ENST00000398788 BIN1O00499 593 aa10.68□□□□□ -0.7
CDH23-203ENST00000398788 NOP2P46087 812 aaKnown RBP10.68□□□□□ -0.7
CDH23-203ENST00000398788 DDX46Q7L014 1031 aaKnown RBP10.68□□□□□ -0.7
CDH23-203ENST00000398788 PPFIBP1Q86W92 1011 aa10.68□□□□□ -0.7
CDH23-203ENST00000398788 SCLT1Q96NL6 688 aa10.68□□□□□ -0.7
CDH23-203ENST00000398788 F13A1P00488 732 aa10.68□□□□□ -0.7
CDH23-203ENST00000398788 PPP2R3AQ06190 1150 aa10.68□□□□□ -0.7
CDH23-203ENST00000398788 CCDC12Q8WUD4 166 aaPredicted RBP10.68□□□□□ -0.7
CDH23-203ENST00000398788 ECHDC1Q9NTX5 307 aa10.68□□□□□ -0.7
CDH23-203ENST00000398788 ZBTB40Q9NUA8 1239 aa10.68□□□□□ -0.7
CDH23-203ENST00000398788 CCDC196A0A1B0GTZ2 297 aa10.67□□□□□ -0.7
CDH23-203ENST00000398788 GJB2P29033 226 aa10.67□□□□□ -0.7
CDH23-203ENST00000398788 OTUD6BQ8N6M0 293 aa10.67□□□□□ -0.7
CDH23-203ENST00000398788 EPC1Q9H2F5 836 aa10.67□□□□□ -0.7
CDH23-203ENST00000398788 COL17A1Q9UMD9 1497 aaPredicted RBP10.67□□□□□ -0.7
CDH23-203ENST00000398788 ABCC11Q96J66 1382 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms