RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 DTNBO60941 627 aa16.47■□□□□ 0.23
PRAME-202ENST00000398743 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.47■□□□□ 0.23
PRAME-202ENST00000398743 TSPY26PQ9H489 355 aa16.47■□□□□ 0.23
PRAME-202ENST00000398743 DNM1Q05193 864 aaKnown RBP16.46■□□□□ 0.23
PRAME-202ENST00000398743 ZBTB38Q8NAP3 1195 aaPredicted RBP16.46■□□□□ 0.23
PRAME-202ENST00000398743 PLA2G12BQ9BX93 195 aa16.46■□□□□ 0.23
PRAME-202ENST00000398743 ZMYM1Q5SVZ6 1142 aa16.45■□□□□ 0.22
PRAME-202ENST00000398743 CCDC183Q5T5S1 534 aa16.45■□□□□ 0.22
PRAME-202ENST00000398743 FAM89AQ96GI7 184 aa16.45■□□□□ 0.22
PRAME-202ENST00000398743 DSCC1Q9BVC3 393 aa16.45■□□□□ 0.22
PRAME-202ENST00000398743 AKAP2Q9Y2D5 859 aa16.45■□□□□ 0.22
PRAME-202ENST00000398743 MAP3K15Q6ZN16 1313 aa16.45■□□□□ 0.22
PRAME-202ENST00000398743 DISP2A7MBM2 1401 aa16.45■□□□□ 0.22
PRAME-202ENST00000398743 GIGYF2Q6Y7W6 1299 aaKnown RBP16.45■□□□□ 0.22
PRAME-202ENST00000398743 PDLIM2Q96JY6 352 aa16.45■□□□□ 0.22
PRAME-202ENST00000398743 HMGB1P09429 215 aaKnown RBP16.44■□□□□ 0.22
PRAME-202ENST00000398743 STK3Q13188 491 aa16.44■□□□□ 0.22
PRAME-202ENST00000398743 TAF7LQ5H9L4 462 aa16.44■□□□□ 0.22
PRAME-202ENST00000398743 CCDC158Q5M9N0 1113 aa16.44■□□□□ 0.22
PRAME-202ENST00000398743 SPEF2Q9C093 1822 aa16.44■□□□□ 0.22
PRAME-202ENST00000398743 BCL9O00512 1426 aa16.44■□□□□ 0.22
PRAME-202ENST00000398743 LETM1O95202 739 aaPredicted RBP16.44■□□□□ 0.22
PRAME-202ENST00000398743 CSF1RP07333 972 aa16.44■□□□□ 0.22
PRAME-202ENST00000398743 IFIT5Q13325 482 aaKnown RBP16.44■□□□□ 0.22
PRAME-202ENST00000398743 Q6ZUG5 572 aa16.44■□□□□ 0.22
PRAME-202ENST00000398743 GTF3C6Q969F1 213 aa16.44■□□□□ 0.22
PRAME-202ENST00000398743 RNF113AO15541 343 aaKnown RBP16.43■□□□□ 0.22
PRAME-202ENST00000398743 LRRFIP1Q32MZ4 808 aaKnown RBP16.43■□□□□ 0.22
PRAME-202ENST00000398743 HSP90AB3PQ58FF7 597 aa16.43■□□□□ 0.22
PRAME-202ENST00000398743 GORABQ5T7V8 394 aa16.43■□□□□ 0.22
PRAME-202ENST00000398743 CDC37L1Q7L3B6 337 aa16.43■□□□□ 0.22
PRAME-202ENST00000398743 COL14A1Q05707 1796 aaKnown RBP16.43■□□□□ 0.22
PRAME-202ENST00000398743 CDHR2Q9BYE9 1310 aa16.43■□□□□ 0.22
PRAME-202ENST00000398743 HSP90B1P14625 803 aaKnown RBP16.43■□□□□ 0.22
PRAME-202ENST00000398743 SLFNL1Q499Z3 407 aa16.43■□□□□ 0.22
PRAME-202ENST00000398743 TTC39AQ5SRH9 613 aa16.43■□□□□ 0.22
PRAME-202ENST00000398743 RNF214Q8ND24 703 aa16.43■□□□□ 0.22
PRAME-202ENST00000398743 CCDC85AQ96PX6 553 aaPredicted RBP16.43■□□□□ 0.22
PRAME-202ENST00000398743 MAST3O60307 1309 aa16.42■□□□□ 0.22
PRAME-202ENST00000398743 KRT85P78386 507 aa16.42■□□□□ 0.22
PRAME-202ENST00000398743 HS1BP3Q53T59 392 aa16.42■□□□□ 0.22
PRAME-202ENST00000398743 XAGE2Q96GT9 111 aa16.42■□□□□ 0.22
PRAME-202ENST00000398743 LRP6O75581 1613 aa16.42■□□□□ 0.22
PRAME-202ENST00000398743 HSPD1P10809 573 aaKnown RBP16.41■□□□□ 0.22
PRAME-202ENST00000398743 FGD1P98174 961 aa16.41■□□□□ 0.22
PRAME-202ENST00000398743 FKBP4Q02790 459 aaKnown RBP eCLIP16.41■□□□□ 0.22
PRAME-202ENST00000398743 HLFQ16534 295 aa16.41■□□□□ 0.22
PRAME-202ENST00000398743 STOX1Q6ZVD7 989 aa16.41■□□□□ 0.22
PRAME-202ENST00000398743 TCHHQ07283 1943 aa16.41■□□□□ 0.22
PRAME-202ENST00000398743 CYP19A1P11511 503 aaPredicted RBP16.41■□□□□ 0.22
PRAME-202ENST00000398743 TPRNQ4KMQ1 711 aa16.41■□□□□ 0.22
PRAME-202ENST00000398743 DHX32Q7L7V1 743 aaKnown RBP16.41■□□□□ 0.22
PRAME-202ENST00000398743 ZSCAN30Q86W11 494 aa16.41■□□□□ 0.22
PRAME-202ENST00000398743 NLRP10Q86W26 655 aa16.41■□□□□ 0.22
PRAME-202ENST00000398743 FAM184AQ8NB25 1140 aa16.41■□□□□ 0.22
PRAME-202ENST00000398743 ITGB4P16144 1822 aa16.41■□□□□ 0.22
PRAME-202ENST00000398743 EXOC5O00471 708 aa16.4■□□□□ 0.22
PRAME-202ENST00000398743 GPTP24298 496 aa16.4■□□□□ 0.22
PRAME-202ENST00000398743 ADORA1P30542 326 aa16.4■□□□□ 0.22
PRAME-202ENST00000398743 FERMT3Q86UX7 667 aa16.4■□□□□ 0.22
PRAME-202ENST00000398743 KLHL34Q8N239 644 aa16.4■□□□□ 0.22
PRAME-202ENST00000398743 BRF1Q92994 677 aa16.4■□□□□ 0.22
PRAME-202ENST00000398743 SLC4A9Q96Q91 983 aa16.4■□□□□ 0.22
PRAME-202ENST00000398743 PLCH1Q4KWH8 1693 aa16.39■□□□□ 0.21
PRAME-202ENST00000398743 ZFYP08048 801 aaPredicted RBP16.39■□□□□ 0.21
PRAME-202ENST00000398743 SYTL4Q96C24 671 aaPredicted RBP16.39■□□□□ 0.21
PRAME-202ENST00000398743 LRRC2Q9BYS8 371 aa16.39■□□□□ 0.21
PRAME-202ENST00000398743 ZBTB1Q9Y2K1 713 aa16.39■□□□□ 0.21
PRAME-202ENST00000398743 ABCC12Q96J65 1359 aa16.39■□□□□ 0.21
PRAME-202ENST00000398743 ELP1O95163 1332 aa16.39■□□□□ 0.21
PRAME-202ENST00000398743 M0R2C6 588 aa16.38■□□□□ 0.21
PRAME-202ENST00000398743 JAK2O60674 1132 aa16.38■□□□□ 0.21
PRAME-202ENST00000398743 ITGA6P23229 1130 aa16.38■□□□□ 0.21
PRAME-202ENST00000398743 TTLL11Q8NHH1 800 aa16.38■□□□□ 0.21
PRAME-202ENST00000398743 RIC1Q4ADV7 1423 aa16.38■□□□□ 0.21
PRAME-202ENST00000398743 E7EWF7 191 aa16.38■□□□□ 0.21
PRAME-202ENST00000398743 MSNP26038 577 aaKnown RBP16.38■□□□□ 0.21
PRAME-202ENST00000398743 CTSWP56202 376 aa16.38■□□□□ 0.21
PRAME-202ENST00000398743 METTL24Q5JXM2 366 aa16.38■□□□□ 0.21
PRAME-202ENST00000398743 LDHAL6AQ6ZMR3 332 aa16.38■□□□□ 0.21
PRAME-202ENST00000398743 SYNE4Q8N205 404 aa16.38■□□□□ 0.21
PRAME-202ENST00000398743 OSBP2Q969R2 916 aa16.38■□□□□ 0.21
PRAME-202ENST00000398743 GREM2Q9H772 168 aa16.38■□□□□ 0.21
PRAME-202ENST00000398743 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.37■□□□□ 0.21
PRAME-202ENST00000398743 ANKRD18BA2A2Z9 1011 aa16.37■□□□□ 0.21
PRAME-202ENST00000398743 PFKFB2O60825 505 aa16.37■□□□□ 0.21
PRAME-202ENST00000398743 SCRN1Q12765 414 aa16.37■□□□□ 0.21
PRAME-202ENST00000398743 ATP2B3Q16720 1220 aa16.37■□□□□ 0.21
PRAME-202ENST00000398743 TTC6Q86TZ1 520 aa16.37■□□□□ 0.21
PRAME-202ENST00000398743 LLPHQ9BRT6 129 aaKnown RBP16.37■□□□□ 0.21
PRAME-202ENST00000398743 SCAND2PQ9GZW5 306 aaPredicted RBP16.37■□□□□ 0.21
PRAME-202ENST00000398743 RIPOR2Q9Y4F9 1068 aa16.37■□□□□ 0.21
PRAME-202ENST00000398743 EXOSC10Q01780 885 aaKnown RBP16.37■□□□□ 0.21
PRAME-202ENST00000398743 AGXT2Q9BYV1 514 aa16.37■□□□□ 0.21
PRAME-202ENST00000398743 TRMT112Q9UI30 125 aaKnown RBP16.37■□□□□ 0.21
PRAME-202ENST00000398743 ERVV-1B6SEH8 477 aa16.36■□□□□ 0.21
PRAME-202ENST00000398743 IRS4O14654 1257 aaPredicted RBP16.36■□□□□ 0.21
PRAME-202ENST00000398743 IL6STP40189 918 aaPredicted RBP16.36■□□□□ 0.21
PRAME-202ENST00000398743 SCARF1Q14162 830 aa16.36■□□□□ 0.21
PRAME-202ENST00000398743 WASHC4Q2M389 1173 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms