RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 KIAA2012Q0VF49 1180 aa17.16■□□□□ 0.34
VCX3A-202ENST00000398729 CCDC152Q4G0S7 254 aa17.16■□□□□ 0.34
VCX3A-202ENST00000398729 BEGAINQ9BUH8 593 aa17.16■□□□□ 0.34
VCX3A-202ENST00000398729 ADARB2Q9NS39 739 aaKnown RBP17.16■□□□□ 0.34
VCX3A-202ENST00000398729 ZNRF3Q9ULT6 936 aa17.16■□□□□ 0.34
VCX3A-202ENST00000398729 FLIIQ13045 1269 aa17.15■□□□□ 0.34
VCX3A-202ENST00000398729 JARID2Q92833 1246 aaPredicted RBP17.15■□□□□ 0.34
VCX3A-202ENST00000398729 GLIS2Q9BZE0 524 aaPredicted RBP17.15■□□□□ 0.34
VCX3A-202ENST00000398729 NSFL1CQ9UNZ2 370 aaKnown RBP17.15■□□□□ 0.34
VCX3A-202ENST00000398729 TRPM7Q96QT4 1865 aa17.15■□□□□ 0.34
VCX3A-202ENST00000398729 CDHR2Q9BYE9 1310 aa17.15■□□□□ 0.34
VCX3A-202ENST00000398729 THSD7BQ9C0I4 1608 aa17.14■□□□□ 0.33
VCX3A-202ENST00000398729 NEURL1BA8MQ27 555 aa17.14■□□□□ 0.33
VCX3A-202ENST00000398729 CELF2O95319 508 aaKnown RBP17.14■□□□□ 0.33
VCX3A-202ENST00000398729 GMPSP49915 693 aaPredicted RBP17.14■□□□□ 0.33
VCX3A-202ENST00000398729 MLLT1Q03111 559 aaPredicted RBP17.14■□□□□ 0.33
VCX3A-202ENST00000398729 FKBP5Q13451 457 aaPredicted RBP17.14■□□□□ 0.33
VCX3A-202ENST00000398729 CWF19L2Q2TBE0 894 aaKnown RBP17.14■□□□□ 0.33
VCX3A-202ENST00000398729 SPINK5Q9NQ38 1064 aaPredicted RBP17.14■□□□□ 0.33
VCX3A-202ENST00000398729 TNRC18O15417 2968 aaPredicted RBP17.13■□□□□ 0.33
VCX3A-202ENST00000398729 SEC31BQ9NQW1 1179 aa17.13■□□□□ 0.33
VCX3A-202ENST00000398729 DUOX1Q9NRD9 1551 aa17.13■□□□□ 0.33
VCX3A-202ENST00000398729 COL4A1P02462 1669 aa17.13■□□□□ 0.33
VCX3A-202ENST00000398729 CASP8AP2Q9UKL3 1982 aa17.12■□□□□ 0.33
VCX3A-202ENST00000398729 C6orf229H3BNL8 230 aa17.12■□□□□ 0.33
VCX3A-202ENST00000398729 GPSM2P81274 684 aa17.12■□□□□ 0.33
VCX3A-202ENST00000398729 WASHC4Q2M389 1173 aa17.12■□□□□ 0.33
VCX3A-202ENST00000398729 DNAAF4Q8WXU2 420 aa17.12■□□□□ 0.33
VCX3A-202ENST00000398729 HHIPL1Q96JK4 782 aa17.12■□□□□ 0.33
VCX3A-202ENST00000398729 CCDC85AQ96PX6 553 aaPredicted RBP17.12■□□□□ 0.33
VCX3A-202ENST00000398729 ZIC5Q96T25 663 aa17.12■□□□□ 0.33
VCX3A-202ENST00000398729 MCOLN1Q9GZU1 580 aa17.12■□□□□ 0.33
VCX3A-202ENST00000398729 SHTN1A0MZ66 631 aa17.11■□□□□ 0.33
VCX3A-202ENST00000398729 CTSWP56202 376 aa17.11■□□□□ 0.33
VCX3A-202ENST00000398729 CIAPIN1Q6FI81 312 aa17.11■□□□□ 0.33
VCX3A-202ENST00000398729 DLK2Q6UY11 383 aa17.11■□□□□ 0.33
VCX3A-202ENST00000398729 EYA3Q99504 573 aa17.11■□□□□ 0.33
VCX3A-202ENST00000398729 MYH3P11055 1940 aa17.11■□□□□ 0.33
VCX3A-202ENST00000398729 H7C1W4 665 aa17.1■□□□□ 0.33
VCX3A-202ENST00000398729 RAD17O75943 681 aa17.1■□□□□ 0.33
VCX3A-202ENST00000398729 TNIP1Q15025 636 aa17.1■□□□□ 0.33
VCX3A-202ENST00000398729 UBE3BQ7Z3V4 1068 aa17.1■□□□□ 0.33
VCX3A-202ENST00000398729 ANKRD18AQ8IVF6 992 aa17.1■□□□□ 0.33
VCX3A-202ENST00000398729 POLLQ9UGP5 575 aa17.1■□□□□ 0.33
VCX3A-202ENST00000398729 ZNF521Q96K83 1311 aa17.1■□□□□ 0.33
VCX3A-202ENST00000398729 YDJCA8MPS7 323 aa17.09■□□□□ 0.33
VCX3A-202ENST00000398729 RIMBP2O15034 1052 aa17.09■□□□□ 0.33
VCX3A-202ENST00000398729 GCKRQ14397 625 aa17.09■□□□□ 0.33
VCX3A-202ENST00000398729 LINS1Q8NG48 757 aa17.09■□□□□ 0.33
VCX3A-202ENST00000398729 TTLL11Q8NHH1 800 aa17.09■□□□□ 0.33
VCX3A-202ENST00000398729 TBC1D16Q8TBP0 767 aa17.09■□□□□ 0.33
VCX3A-202ENST00000398729 TRPM4Q8TD43 1214 aa17.09■□□□□ 0.33
VCX3A-202ENST00000398729 ZC3H15Q8WU90 426 aaKnown RBP17.09■□□□□ 0.33
VCX3A-202ENST00000398729 CDC5LQ99459 802 aaKnown RBP17.09■□□□□ 0.33
VCX3A-202ENST00000398729 PODXL2Q9NZ53 605 aa17.09■□□□□ 0.33
VCX3A-202ENST00000398729 ANKIB1Q9P2G1 1089 aa17.09■□□□□ 0.33
VCX3A-202ENST00000398729 CA12O43570 354 aa17.08■□□□□ 0.32
VCX3A-202ENST00000398729 BRPF1P55201 1214 aaPredicted RBP17.08■□□□□ 0.32
VCX3A-202ENST00000398729 BCL2L13Q9BXK5 485 aa17.08■□□□□ 0.32
VCX3A-202ENST00000398729 ZC3H12CQ9C0D7 883 aaKnown RBP17.08■□□□□ 0.32
VCX3A-202ENST00000398729 CNOT7Q9UIV1 285 aaKnown RBP17.08■□□□□ 0.32
VCX3A-202ENST00000398729 PDE4DIPQ5VU43 2346 aa17.08■□□□□ 0.32
VCX3A-202ENST00000398729 UFL1O94874 794 aa17.07■□□□□ 0.32
VCX3A-202ENST00000398729 CDC37L1Q7L3B6 337 aa17.07■□□□□ 0.32
VCX3A-202ENST00000398729 USP48Q86UV5 1035 aa17.07■□□□□ 0.32
VCX3A-202ENST00000398729 GREM2Q9H772 168 aa17.07■□□□□ 0.32
VCX3A-202ENST00000398729 ZNF408Q9H9D4 720 aa17.07■□□□□ 0.32
VCX3A-202ENST00000398729 DBNDD1Q9H9R9 158 aa17.07■□□□□ 0.32
VCX3A-202ENST00000398729 GGA1Q9UJY5 639 aa17.07■□□□□ 0.32
VCX3A-202ENST00000398729 RTL9Q8NET4 1388 aa17.06■□□□□ 0.32
VCX3A-202ENST00000398729 PLA2G12BQ9BX93 195 aa17.06■□□□□ 0.32
VCX3A-202ENST00000398729 XDHP47989 1333 aa17.05■□□□□ 0.32
VCX3A-202ENST00000398729 F6X3S4 739 aa17.05■□□□□ 0.32
VCX3A-202ENST00000398729 G3V3G9 751 aa17.05■□□□□ 0.32
VCX3A-202ENST00000398729 ECE2O60344 883 aa17.05■□□□□ 0.32
VCX3A-202ENST00000398729 DCAF8Q5TAQ9 597 aa17.05■□□□□ 0.32
VCX3A-202ENST00000398729 ZBTB12Q9Y330 459 aaPredicted RBP17.05■□□□□ 0.32
VCX3A-202ENST00000398729 E9PSI1 815 aa17.04■□□□□ 0.32
VCX3A-202ENST00000398729 CASP7P55210 303 aa17.04■□□□□ 0.32
VCX3A-202ENST00000398729 DGKZQ13574 1117 aa17.04■□□□□ 0.32
VCX3A-202ENST00000398729 DOK7Q18PE1 504 aa17.04■□□□□ 0.32
VCX3A-202ENST00000398729 BEND3Q5T5X7 828 aa17.04■□□□□ 0.32
VCX3A-202ENST00000398729 BSDC1Q9NW68 430 aaPredicted RBP17.04■□□□□ 0.32
VCX3A-202ENST00000398729 SPEF2Q9C093 1822 aa17.03■□□□□ 0.32
VCX3A-202ENST00000398729 FAM155AB1AL88 458 aaPredicted RBP17.03■□□□□ 0.32
VCX3A-202ENST00000398729 CCER2I3L3R5 266 aa17.03■□□□□ 0.32
VCX3A-202ENST00000398729 PSMD14O00487 310 aa17.03■□□□□ 0.32
VCX3A-202ENST00000398729 EGFRP00533 1210 aa17.03■□□□□ 0.32
VCX3A-202ENST00000398729 ATP2B4P23634 1241 aa17.03■□□□□ 0.32
VCX3A-202ENST00000398729 IGHMBP2P38935 993 aaKnown RBP17.03■□□□□ 0.32
VCX3A-202ENST00000398729 HUNKP57058 714 aa17.03■□□□□ 0.32
VCX3A-202ENST00000398729 SAMD7Q7Z3H4 446 aa17.03■□□□□ 0.32
VCX3A-202ENST00000398729 MICALL2Q8IY33 904 aa17.03■□□□□ 0.32
VCX3A-202ENST00000398729 KCNQ5Q9NR82 932 aa17.03■□□□□ 0.32
VCX3A-202ENST00000398729 POLR2AP24928 1970 aaKnown RBP17.02■□□□□ 0.32
VCX3A-202ENST00000398729 H7C1D1 291 aa17.02■□□□□ 0.32
VCX3A-202ENST00000398729 ITGA6P23229 1130 aa17.02■□□□□ 0.32
VCX3A-202ENST00000398729 NOGQ13253 232 aa17.02■□□□□ 0.32
VCX3A-202ENST00000398729 DPF2Q92785 391 aa17.02■□□□□ 0.32
VCX3A-202ENST00000398729 MINPP1Q9UNW1 487 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms