RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 PUF60Q9UHX1 559 aaKnown RBP12.79□□□□□ -0.36
MSL3-207ENST00000398527 WDR90Q96KV7 1748 aa12.79□□□□□ -0.36
MSL3-207ENST00000398527 BRMS1Q9HCU9 246 aa12.79□□□□□ -0.36
MSL3-207ENST00000398527 CHMP5Q9NZZ3 219 aa12.79□□□□□ -0.36
MSL3-207ENST00000398527 CIZ1Q9ULV3 898 aaPredicted RBP12.79□□□□□ -0.36
MSL3-207ENST00000398527 ABCC6O95255 1503 aa12.79□□□□□ -0.36
MSL3-207ENST00000398527 PTPRCP08575 1304 aa12.79□□□□□ -0.36
MSL3-207ENST00000398527 SYNRGQ9UMZ2 1314 aa12.79□□□□□ -0.36
MSL3-207ENST00000398527 CHL1O00533 1208 aa12.78□□□□□ -0.36
MSL3-207ENST00000398527 CTR9Q6PD62 1173 aa12.78□□□□□ -0.36
MSL3-207ENST00000398527 ACSBG1Q96GR2 724 aa12.78□□□□□ -0.36
MSL3-207ENST00000398527 FLT4P35916 1363 aa12.78□□□□□ -0.36
MSL3-207ENST00000398527 KDRP35968 1356 aa12.78□□□□□ -0.36
MSL3-207ENST00000398527 HMGN5P82970 282 aaKnown RBP12.78□□□□□ -0.36
MSL3-207ENST00000398527 KCNA1Q09470 495 aa12.78□□□□□ -0.36
MSL3-207ENST00000398527 SNRNP27Q8WVK2 155 aaKnown RBP12.78□□□□□ -0.36
MSL3-207ENST00000398527 KIF3AQ9Y496 699 aa12.78□□□□□ -0.36
MSL3-207ENST00000398527 HMGB1P1B2RPK0 211 aaPredicted RBP12.77□□□□□ -0.36
MSL3-207ENST00000398527 BDNFP23560 247 aa12.77□□□□□ -0.36
MSL3-207ENST00000398527 TSPYL6Q8N831 410 aa12.77□□□□□ -0.36
MSL3-207ENST00000398527 RETREG2Q8NC44 543 aa12.77□□□□□ -0.36
MSL3-207ENST00000398527 VTI1AQ96AJ9 217 aa12.77□□□□□ -0.36
MSL3-207ENST00000398527 NOL10Q9BSC4 688 aaKnown RBP12.77□□□□□ -0.36
MSL3-207ENST00000398527 TPX2Q9ULW0 747 aaKnown RBP12.77□□□□□ -0.36
MSL3-207ENST00000398527 SOS1Q07889 1333 aaPredicted RBP12.77□□□□□ -0.37
MSL3-207ENST00000398527 TNNT1P13805 278 aa12.77□□□□□ -0.37
MSL3-207ENST00000398527 CDC37Q16543 378 aaPredicted RBP12.77□□□□□ -0.37
MSL3-207ENST00000398527 SLC27A3Q5K4L6 730 aa12.77□□□□□ -0.37
MSL3-207ENST00000398527 SULT6B1Q6IMI4 303 aa12.77□□□□□ -0.37
MSL3-207ENST00000398527 PMM1Q92871 262 aa12.77□□□□□ -0.37
MSL3-207ENST00000398527 AXIN2Q9Y2T1 843 aa12.77□□□□□ -0.37
MSL3-207ENST00000398527 DDIT3P35638 169 aa12.76□□□□□ -0.37
MSL3-207ENST00000398527 KLRG1Q96E93 195 aa12.76□□□□□ -0.37
MSL3-207ENST00000398527 MAP3K19Q56UN5 1328 aa12.76□□□□□ -0.37
MSL3-207ENST00000398527 CACNA1FO60840 1977 aa12.76□□□□□ -0.37
MSL3-207ENST00000398527 N4BP2Q86UW6 1770 aaPredicted RBP12.76□□□□□ -0.37
MSL3-207ENST00000398527 RTL1A6NKG5 1358 aa12.76□□□□□ -0.37
MSL3-207ENST00000398527 HSP90AB2PQ58FF8 381 aa12.76□□□□□ -0.37
MSL3-207ENST00000398527 SWT1Q5T5J6 900 aaKnown RBP12.76□□□□□ -0.37
MSL3-207ENST00000398527 HSCBQ8IWL3 235 aa12.76□□□□□ -0.37
MSL3-207ENST00000398527 RPAP2Q8IXW5 612 aaPredicted RBP12.76□□□□□ -0.37
MSL3-207ENST00000398527 C8orf58Q8NAV2 365 aa12.76□□□□□ -0.37
MSL3-207ENST00000398527 THUMPD2Q9BTF0 503 aaKnown RBP12.76□□□□□ -0.37
MSL3-207ENST00000398527 DCTPP1Q9H773 170 aa12.76□□□□□ -0.37
MSL3-207ENST00000398527 TFCP2L1Q9NZI6 479 aa12.76□□□□□ -0.37
MSL3-207ENST00000398527 HTATSF1O43719 755 aaKnown RBP12.75□□□□□ -0.37
MSL3-207ENST00000398527 TOMM70O94826 608 aa12.75□□□□□ -0.37
MSL3-207ENST00000398527 TNNT3P45378 269 aaPredicted RBP12.75□□□□□ -0.37
MSL3-207ENST00000398527 SLC24A3Q9HC58 644 aa12.75□□□□□ -0.37
MSL3-207ENST00000398527 KLHL42Q9P2K6 505 aa12.75□□□□□ -0.37
MSL3-207ENST00000398527 PAXBP1Q9Y5B6 917 aa12.75□□□□□ -0.37
MSL3-207ENST00000398527 CD2APQ9Y5K6 639 aa12.75□□□□□ -0.37
MSL3-207ENST00000398527 SIRT2Q8IXJ6 389 aa12.74□□□□□ -0.37
MSL3-207ENST00000398527 TTC30BQ8N4P2 665 aa12.74□□□□□ -0.37
MSL3-207ENST00000398527 LNPKQ9C0E8 428 aa12.74□□□□□ -0.37
MSL3-207ENST00000398527 DDX49Q9Y6V7 483 aaKnown RBP12.74□□□□□ -0.37
MSL3-207ENST00000398527 RGPD5Q99666 1765 aa12.74□□□□□ -0.37
MSL3-207ENST00000398527 DYNC1I1O14576 645 aa12.74□□□□□ -0.37
MSL3-207ENST00000398527 NEFHP12036 1026 aa12.74□□□□□ -0.37
MSL3-207ENST00000398527 NOP2P46087 812 aaKnown RBP12.74□□□□□ -0.37
MSL3-207ENST00000398527 OGFOD1Q8N543 542 aa12.74□□□□□ -0.37
MSL3-207ENST00000398527 ERCC4Q92889 916 aaPredicted RBP12.74□□□□□ -0.37
MSL3-207ENST00000398527 SPOCK3Q9BQ16 436 aa12.74□□□□□ -0.37
MSL3-207ENST00000398527 NRBP1Q9UHY1 535 aa12.74□□□□□ -0.37
MSL3-207ENST00000398527 SUFUQ9UMX1 484 aa12.74□□□□□ -0.37
MSL3-207ENST00000398527 ERICH4A6NGS2 130 aa12.73□□□□□ -0.37
MSL3-207ENST00000398527 GYS2P54840 703 aa12.73□□□□□ -0.37
MSL3-207ENST00000398527 ANKRD44Q8N8A2 993 aa12.73□□□□□ -0.37
MSL3-207ENST00000398527 ISY1Q9ULR0 285 aaKnown RBP12.73□□□□□ -0.37
MSL3-207ENST00000398527 CSB-PGBD3P0DP91 1061 aa12.73□□□□□ -0.37
MSL3-207ENST00000398527 COPB2P35606 906 aa12.73□□□□□ -0.37
MSL3-207ENST00000398527 BABAM1Q9NWV8 329 aa12.73□□□□□ -0.37
MSL3-207ENST00000398527 CWC25Q9NXE8 425 aaPredicted RBP12.73□□□□□ -0.37
MSL3-207ENST00000398527 IGSF1Q8N6C5 1336 aa12.72□□□□□ -0.37
MSL3-207ENST00000398527 MCM4P33991 863 aa12.72□□□□□ -0.37
MSL3-207ENST00000398527 FLT3P36888 993 aa12.72□□□□□ -0.37
MSL3-207ENST00000398527 NLRP6P59044 892 aa12.72□□□□□ -0.37
MSL3-207ENST00000398527 ANKRD45Q5TZF3 282 aa12.72□□□□□ -0.37
MSL3-207ENST00000398527 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.72□□□□□ -0.37
MSL3-207ENST00000398527 CDC45O75419 566 aa12.72□□□□□ -0.37
MSL3-207ENST00000398527 AMPHP49418 695 aa12.72□□□□□ -0.37
MSL3-207ENST00000398527 DZIP3Q86Y13 1208 aaKnown RBP12.72□□□□□ -0.37
MSL3-207ENST00000398527 SLKQ9H2G2 1235 aaPredicted RBP12.72□□□□□ -0.37
MSL3-207ENST00000398527 ZNF232Q9UNY5 417 aa12.72□□□□□ -0.37
MSL3-207ENST00000398527 DDX11L8A8MPP1 907 aa12.71□□□□□ -0.37
MSL3-207ENST00000398527 GUCY2CP25092 1073 aa12.71□□□□□ -0.37
MSL3-207ENST00000398527 ICE2Q659A1 982 aa12.71□□□□□ -0.37
MSL3-207ENST00000398527 ZNF771Q7L3S4 317 aaPredicted RBP12.71□□□□□ -0.37
MSL3-207ENST00000398527 GAS2L2Q8NHY3 880 aa12.71□□□□□ -0.37
MSL3-207ENST00000398527 PCDH10Q9P2E7 1040 aa12.71□□□□□ -0.37
MSL3-207ENST00000398527 ABCF2Q9UG63 623 aa12.71□□□□□ -0.37
MSL3-207ENST00000398527 SUN2Q9UH99 717 aa12.71□□□□□ -0.37
MSL3-207ENST00000398527 ARHGEF25Q86VW2 580 aa12.71□□□□□ -0.38
MSL3-207ENST00000398527 KLHL23Q8NBE8 558 aa12.71□□□□□ -0.38
MSL3-207ENST00000398527 CICQ96RK0 1608 aaPredicted RBP12.71□□□□□ -0.38
MSL3-207ENST00000398527 IPO5O00410 1097 aaKnown RBP12.7□□□□□ -0.38
MSL3-207ENST00000398527 OFD1O75665 1012 aa12.7□□□□□ -0.38
MSL3-207ENST00000398527 IFT88Q13099 833 aa12.7□□□□□ -0.38
MSL3-207ENST00000398527 GIMAP6Q6P9H5 292 aa12.7□□□□□ -0.38
MSL3-207ENST00000398527 ZNF396Q96N95 335 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms