RNA–Protein interactions for RNA: ENST00000398399.6

VGLL3-202, Transcript of vestigial like family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VGLL3, Length 10,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-202ENST00000398399 ATP2C2O75185 946 aa15.58■□□□□ 0.08
VGLL3-202ENST00000398399 CPLX3Q8WVH0 158 aa15.58■□□□□ 0.08
VGLL3-202ENST00000398399 PSMA7O14818 248 aa15.58■□□□□ 0.08
VGLL3-202ENST00000398399 ZNF213O14771 459 aa15.58■□□□□ 0.08
VGLL3-202ENST00000398399 RASSF2P50749 326 aa15.58■□□□□ 0.08
VGLL3-202ENST00000398399 PRC1O43663 620 aa15.57■□□□□ 0.08
VGLL3-202ENST00000398399 SF3B2Q13435 895 aaKnown RBP15.57■□□□□ 0.08
VGLL3-202ENST00000398399 TAOK1Q7L7X3 1001 aa15.57■□□□□ 0.08
VGLL3-202ENST00000398399 CABP4P57796 275 aa15.57■□□□□ 0.08
VGLL3-202ENST00000398399 TMX1Q9H3N1 280 aa15.57■□□□□ 0.08
VGLL3-202ENST00000398399 MYH7P12883 1935 aa15.57■□□□□ 0.08
VGLL3-202ENST00000398399 KRT13P13646 458 aa15.57■□□□□ 0.08
VGLL3-202ENST00000398399 CCDC62Q6P9F0 684 aa15.57■□□□□ 0.08
VGLL3-202ENST00000398399 SSH1Q8WYL5 1049 aa15.57■□□□□ 0.08
VGLL3-202ENST00000398399 GRIN2BQ13224 1484 aa15.57■□□□□ 0.08
VGLL3-202ENST00000398399 GOLGA6CA6NDK9 693 aa15.57■□□□□ 0.08
VGLL3-202ENST00000398399 GOLGA6DP0CG33 693 aa15.57■□□□□ 0.08
VGLL3-202ENST00000398399 GOLGA6AQ9NYA3 693 aa15.57■□□□□ 0.08
VGLL3-202ENST00000398399 NDC80O14777 642 aa15.57■□□□□ 0.08
VGLL3-202ENST00000398399 INTS4Q96HW7 963 aaKnown RBP15.57■□□□□ 0.08
VGLL3-202ENST00000398399 MAP7Q14244 749 aa15.57■□□□□ 0.08
VGLL3-202ENST00000398399 ZNF530Q6P9A1 599 aaPredicted RBP15.57■□□□□ 0.08
VGLL3-202ENST00000398399 GIMAP6Q6P9H5 292 aa15.57■□□□□ 0.08
VGLL3-202ENST00000398399 CHMP4BP1P59074 171 aa15.56■□□□□ 0.08
VGLL3-202ENST00000398399 PPFIA1Q13136 1202 aa15.56■□□□□ 0.08
VGLL3-202ENST00000398399 PLCB1Q9NQ66 1216 aa15.56■□□□□ 0.08
VGLL3-202ENST00000398399 ZMYM4Q5VZL5 1548 aa15.56■□□□□ 0.08
VGLL3-202ENST00000398399 RPUSD2Q8IZ73 545 aaKnown RBP15.56■□□□□ 0.08
VGLL3-202ENST00000398399 METAP2P50579 478 aaKnown RBP eCLIP15.56■□□□□ 0.08
VGLL3-202ENST00000398399 FAM114A2Q9NRY5 505 aa15.56■□□□□ 0.08
VGLL3-202ENST00000398399 VIRMAQ69YN4 1812 aaKnown RBP15.56■□□□□ 0.08
VGLL3-202ENST00000398399 PPP2R3AQ06190 1150 aa15.56■□□□□ 0.08
VGLL3-202ENST00000398399 CCDC26Q8TAB7 109 aa15.56■□□□□ 0.08
VGLL3-202ENST00000398399 USP5P45974 858 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 BICDL1Q6ZP65 573 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 USP48Q86UV5 1035 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 SYCP3Q8IZU3 236 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 ELP1O95163 1332 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 CFAP157Q5JU67 520 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 IRX4P78413 519 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 RAB3IPQ96QF0 476 aaPredicted RBP15.55■□□□□ 0.08
VGLL3-202ENST00000398399 SELENOSQ9BQE4 189 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 TRIM27P14373 513 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 ANKRD24Q8TF21 1146 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 NPHP3Q7Z494 1330 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 PSMC4P43686 418 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 GTF3C6Q969F1 213 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 NDUFAB1O14561 156 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 SMC1BQ8NDV3 1235 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 IMPACTQ9P2X3 320 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 ODF2LQ9ULJ1 636 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 TBCAO75347 108 aaKnown RBP15.55■□□□□ 0.08
VGLL3-202ENST00000398399 STMN1P16949 149 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 CNGA1P29973 690 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 SYNCQ9H7C4 482 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 RPRD2Q5VT52 1461 aaKnown RBP15.55■□□□□ 0.08
VGLL3-202ENST00000398399 SPAG5Q96R06 1193 aa15.55■□□□□ 0.08
VGLL3-202ENST00000398399 CAVIN4Q5BKX8 364 aa15.54■□□□□ 0.08
VGLL3-202ENST00000398399 TCERG1LQ5VWI1 586 aa15.54■□□□□ 0.08
VGLL3-202ENST00000398399 CNPY2Q9Y2B0 182 aa15.54■□□□□ 0.08
VGLL3-202ENST00000398399 IFT20Q8IY31 132 aa15.54■□□□□ 0.08
VGLL3-202ENST00000398399 ZNF652Q9Y2D9 606 aa15.54■□□□□ 0.08
VGLL3-202ENST00000398399 MYL6BP14649 208 aa15.54■□□□□ 0.08
VGLL3-202ENST00000398399 UTP11Q9Y3A2 253 aaKnown RBP15.54■□□□□ 0.08
VGLL3-202ENST00000398399 SNAPC4Q5SXM2 1469 aa15.54■□□□□ 0.08
VGLL3-202ENST00000398399 CEP85LQ5SZL2 805 aa15.54■□□□□ 0.08
VGLL3-202ENST00000398399 NUTM1Q86Y26 1132 aa15.54■□□□□ 0.08
VGLL3-202ENST00000398399 SUDS3Q9H7L9 328 aaPredicted RBP15.54■□□□□ 0.08
VGLL3-202ENST00000398399 TPD52P55327 224 aaPredicted RBP15.54■□□□□ 0.08
VGLL3-202ENST00000398399 SLC8A1P32418 973 aa15.54■□□□□ 0.08
VGLL3-202ENST00000398399 PUS7Q96PZ0 661 aaKnown RBP15.54■□□□□ 0.08
VGLL3-202ENST00000398399 TROQ12816 1431 aaPredicted RBP15.54■□□□□ 0.08
VGLL3-202ENST00000398399 GOLGA8AA7E2F4 631 aa15.54■□□□□ 0.08
VGLL3-202ENST00000398399 ARID4AP29374 1257 aaPredicted RBP15.54■□□□□ 0.08
VGLL3-202ENST00000398399 GSTA5Q7RTV2 222 aa15.54■□□□□ 0.08
VGLL3-202ENST00000398399 TRPC3Q13507 836 aa15.53■□□□□ 0.08
VGLL3-202ENST00000398399 NEDD9Q14511 834 aa15.53■□□□□ 0.08
VGLL3-202ENST00000398399 SMC5Q8IY18 1101 aa15.53■□□□□ 0.08
VGLL3-202ENST00000398399 SEC62Q99442 399 aaKnown RBP15.53■□□□□ 0.08
VGLL3-202ENST00000398399 NUF2Q9BZD4 464 aa15.53■□□□□ 0.08
VGLL3-202ENST00000398399 IARSP41252 1262 aaKnown RBP15.53■□□□□ 0.08
VGLL3-202ENST00000398399 PDE4BQ07343 736 aa15.53■□□□□ 0.08
VGLL3-202ENST00000398399 CCDC42Q96M95 316 aa15.53■□□□□ 0.08
VGLL3-202ENST00000398399 IL1RAPL2Q9NP60 686 aa15.53■□□□□ 0.08
VGLL3-202ENST00000398399 GBP7Q8N8V2 638 aaPredicted RBP15.53■□□□□ 0.08
VGLL3-202ENST00000398399 ACTN4O43707 911 aaKnown RBP15.53■□□□□ 0.08
VGLL3-202ENST00000398399 NAIPQ13075 1403 aa15.53■□□□□ 0.08
VGLL3-202ENST00000398399 LRCH2Q5VUJ6 765 aa15.53■□□□□ 0.08
VGLL3-202ENST00000398399 CCDC186Q7Z3E2 898 aa15.53■□□□□ 0.08
VGLL3-202ENST00000398399 NCOA7Q8NI08 942 aa15.53■□□□□ 0.08
VGLL3-202ENST00000398399 CSRNP2Q9H175 543 aa15.53■□□□□ 0.08
VGLL3-202ENST00000398399 PPFIA3O75145 1194 aa15.53■□□□□ 0.08
VGLL3-202ENST00000398399 METTL24Q5JXM2 366 aa15.53■□□□□ 0.08
VGLL3-202ENST00000398399 BRAPQ7Z569 592 aa15.53■□□□□ 0.08
VGLL3-202ENST00000398399 PRIM1P49642 420 aaKnown RBP15.53■□□□□ 0.08
VGLL3-202ENST00000398399 RUFY4Q6ZNE9 571 aa15.53■□□□□ 0.08
VGLL3-202ENST00000398399 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.53■□□□□ 0.08
VGLL3-202ENST00000398399 RAD50Q92878 1312 aa15.53■□□□□ 0.08
VGLL3-202ENST00000398399 SEPT14Q6ZU15 432 aa15.53■□□□□ 0.08
VGLL3-202ENST00000398399 AOPEPQ8N6M6 819 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms