RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 TXNDC11Q6PKC3 985 aa5.71□□□□□ -1.5
CD47-203ENST00000398258 KIAA1211Q6ZU35 1233 aa5.71□□□□□ -1.5
CD47-203ENST00000398258 TRIM50Q86XT4 487 aa5.71□□□□□ -1.5
CD47-203ENST00000398258 PLEKHM2Q8IWE5 1019 aa5.71□□□□□ -1.5
CD47-203ENST00000398258 ZNF594Q96JF6 807 aaPredicted RBP5.71□□□□□ -1.5
CD47-203ENST00000398258 NSUN5Q96P11 429 aaKnown RBP5.71□□□□□ -1.5
CD47-203ENST00000398258 LOC102724428A0A0B4J2F2 783 aa5.7□□□□□ -1.5
CD47-203ENST00000398258 ZNF865P0CJ78 1059 aaPredicted RBP5.7□□□□□ -1.5
CD47-203ENST00000398258 GRIK1P39086 918 aa5.7□□□□□ -1.5
CD47-203ENST00000398258 SIK1P57059 783 aa5.7□□□□□ -1.5
CD47-203ENST00000398258 HIF1AQ16665 826 aa5.7□□□□□ -1.5
CD47-203ENST00000398258 LARGE2Q8N3Y3 721 aa5.7□□□□□ -1.5
CD47-203ENST00000398258 UTP4Q969X6 686 aaKnown RBP5.7□□□□□ -1.5
CD47-203ENST00000398258 MYRFLQ96LU7 910 aa5.7□□□□□ -1.5
CD47-203ENST00000398258 PRRG2O14669 202 aa5.69□□□□□ -1.5
CD47-203ENST00000398258 MMP20O60882 483 aa5.69□□□□□ -1.5
CD47-203ENST00000398258 ACAD11Q709F0 780 aa5.69□□□□□ -1.5
CD47-203ENST00000398258 SHISA5Q8N114 240 aa5.69□□□□□ -1.5
CD47-203ENST00000398258 QTRT2Q9H974 415 aaKnown RBP5.69□□□□□ -1.5
CD47-203ENST00000398258 JAG2Q9Y219 1238 aa5.69□□□□□ -1.5
CD47-203ENST00000398258 COG6Q9Y2V7 657 aa5.69□□□□□ -1.5
CD47-203ENST00000398258 PALM3A6NDB9 673 aaPredicted RBP5.68□□□□□ -1.5
CD47-203ENST00000398258 POM121CA8CG34 1229 aa5.68□□□□□ -1.5
CD47-203ENST00000398258 LINC01387J3KSC0 135 aa5.68□□□□□ -1.5
CD47-203ENST00000398258 DDX3YO15523 660 aaKnown RBP5.68□□□□□ -1.5
CD47-203ENST00000398258 ADAM11O75078 769 aa5.68□□□□□ -1.5
CD47-203ENST00000398258 ATP1A2P50993 1020 aa5.68□□□□□ -1.5
CD47-203ENST00000398258 ARSDP51689 593 aa5.68□□□□□ -1.5
CD47-203ENST00000398258 DGKZQ13574 1117 aa5.68□□□□□ -1.5
CD47-203ENST00000398258 MCM6Q14566 821 aa5.68□□□□□ -1.5
CD47-203ENST00000398258 FAM20CQ8IXL6 584 aa5.68□□□□□ -1.5
CD47-203ENST00000398258 SRA1Q9HD15 236 aaKnown RBP5.68□□□□□ -1.5
CD47-203ENST00000398258 MICAL2O94851 1124 aa5.67□□□□□ -1.5
CD47-203ENST00000398258 EPB42P16452 691 aa5.67□□□□□ -1.5
CD47-203ENST00000398258 MSMPQ1L6U9 139 aa5.67□□□□□ -1.5
CD47-203ENST00000398258 COL13A1Q5TAT6 717 aaPredicted RBP5.67□□□□□ -1.5
CD47-203ENST00000398258 UBASH3BQ8TF42 649 aa5.67□□□□□ -1.5
CD47-203ENST00000398258 FOXD4L4Q8WXT5 416 aaPredicted RBP5.67□□□□□ -1.5
CD47-203ENST00000398258 FAM83CQ9BQN1 747 aa5.67□□□□□ -1.5
CD47-203ENST00000398258 CARD10Q9BWT7 1032 aa5.67□□□□□ -1.5
CD47-203ENST00000398258 MKRN1Q9UHC7 482 aaKnown RBP5.67□□□□□ -1.5
CD47-203ENST00000398258 WDR64B1ANS9 1081 aa5.66□□□□□ -1.5
CD47-203ENST00000398258 EGFRP00533 1210 aa5.66□□□□□ -1.5
CD47-203ENST00000398258 HOXD8P13378 290 aaPredicted RBP5.66□□□□□ -1.5
CD47-203ENST00000398258 ITGB5P18084 799 aa5.66□□□□□ -1.5
CD47-203ENST00000398258 CD68P34810 354 aaPredicted RBP5.66□□□□□ -1.5
CD47-203ENST00000398258 UVSSAQ2YD98 709 aa5.66□□□□□ -1.5
CD47-203ENST00000398258 MAP4K3Q8IVH8 894 aa5.66□□□□□ -1.5
CD47-203ENST00000398258 POM121Q96HA1 1249 aa5.66□□□□□ -1.5
CD47-203ENST00000398258 RTCBQ9Y3I0 505 aaKnown RBP5.66□□□□□ -1.5
CD47-203ENST00000398258 PPME1Q9Y570 386 aa5.66□□□□□ -1.5
CD47-203ENST00000398258 KCNMB2Q9Y691 235 aa5.66□□□□□ -1.5
CD47-203ENST00000398258 PREPP48147 710 aa5.65□□□□□ -1.5
CD47-203ENST00000398258 ATP11AP98196 1134 aa5.65□□□□□ -1.5
CD47-203ENST00000398258 C11orf16Q9NQ32 467 aa5.65□□□□□ -1.5
CD47-203ENST00000398258 CCDC39Q9UFE4 941 aa5.65□□□□□ -1.5
CD47-203ENST00000398258 XYLBO75191 536 aa5.64□□□□□ -1.51
CD47-203ENST00000398258 BMP3P12645 472 aa5.64□□□□□ -1.51
CD47-203ENST00000398258 CDC25BP30305 580 aa5.64□□□□□ -1.51
CD47-203ENST00000398258 BUD31P41223 144 aaPredicted RBP5.64□□□□□ -1.51
CD47-203ENST00000398258 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.64□□□□□ -1.51
CD47-203ENST00000398258 BEND4Q6ZU67 534 aa5.64□□□□□ -1.51
CD47-203ENST00000398258 CLEC10AQ8IUN9 316 aa5.64□□□□□ -1.51
CD47-203ENST00000398258 MFSD14AQ96MC6 490 aa5.64□□□□□ -1.51
CD47-203ENST00000398258 CEP41Q9BYV8 373 aa5.64□□□□□ -1.51
CD47-203ENST00000398258 LRFN2Q9ULH4 789 aa5.64□□□□□ -1.51
CD47-203ENST00000398258 GHRHP01286 108 aa5.63□□□□□ -1.51
CD47-203ENST00000398258 TRIP4Q15650 581 aaPredicted RBP5.63□□□□□ -1.51
CD47-203ENST00000398258 ZNF124Q15973 351 aa5.63□□□□□ -1.51
CD47-203ENST00000398258 ZNF648Q5T619 568 aaPredicted RBP5.63□□□□□ -1.51
CD47-203ENST00000398258 RGL4Q8IZJ4 473 aa5.63□□□□□ -1.51
CD47-203ENST00000398258 LACRTQ9GZZ8 138 aa5.63□□□□□ -1.51
CD47-203ENST00000398258 ATP9BO43861 1147 aa5.62□□□□□ -1.51
CD47-203ENST00000398258 F13BP05160 661 aa5.62□□□□□ -1.51
CD47-203ENST00000398258 PSAPP07602 524 aa5.62□□□□□ -1.51
CD47-203ENST00000398258 SOX18P35713 384 aa5.62□□□□□ -1.51
CD47-203ENST00000398258 C14orf37Q86TY3 774 aa5.62□□□□□ -1.51
CD47-203ENST00000398258 PIM2Q9P1W9 311 aa5.62□□□□□ -1.51
CD47-203ENST00000398258 PRNPP04156 253 aa5.61□□□□□ -1.51
CD47-203ENST00000398258 EPHA1P21709 976 aa5.61□□□□□ -1.51
CD47-203ENST00000398258 IGFBP4P22692 258 aa5.61□□□□□ -1.51
CD47-203ENST00000398258 SEC13P55735 322 aa5.61□□□□□ -1.51
CD47-203ENST00000398258 FAM26DQ5JW98 314 aa5.61□□□□□ -1.51
CD47-203ENST00000398258 CMTR1Q8N1G2 835 aaKnown RBP5.61□□□□□ -1.51
CD47-203ENST00000398258 KLHDC7BQ96G42 594 aa5.61□□□□□ -1.51
CD47-203ENST00000398258 KCNF1Q9H3M0 494 aa5.61□□□□□ -1.51
CD47-203ENST00000398258 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.61□□□□□ -1.51
CD47-203ENST00000398258 FSCN2O14926 492 aa5.6□□□□□ -1.51
CD47-203ENST00000398258 PAPLNO95428 1278 aa5.6□□□□□ -1.51
CD47-203ENST00000398258 DUOXA2Q1HG44 320 aa5.6□□□□□ -1.51
CD47-203ENST00000398258 SH2B1Q9NRF2 756 aaPredicted RBP5.6□□□□□ -1.51
CD47-203ENST00000398258 DBX1A6NMT0 343 aa5.59□□□□□ -1.51
CD47-203ENST00000398258 B8ZZF3 427 aa5.59□□□□□ -1.51
CD47-203ENST00000398258 ARID4AP29374 1257 aaPredicted RBP5.59□□□□□ -1.51
CD47-203ENST00000398258 C11orf91Q3C1V1 193 aa5.59□□□□□ -1.51
CD47-203ENST00000398258 CRTC2Q53ET0 693 aaPredicted RBP5.59□□□□□ -1.51
CD47-203ENST00000398258 SGO2Q562F6 1265 aa5.59□□□□□ -1.51
CD47-203ENST00000398258 TREML1Q86YW5 311 aa5.59□□□□□ -1.51
CD47-203ENST00000398258 DCAF11Q8TEB1 546 aa5.59□□□□□ -1.51
CD47-203ENST00000398258 ASIC4Q96FT7 647 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms