RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 NOB1Q9ULX3 412 aaKnown RBP21.14■□□□□ 0.97
APTR-201ENST00000398043 CXCL9Q07325 125 aa21.13■□□□□ 0.97
APTR-201ENST00000398043 SUCLG2Q96I99 432 aa21.13■□□□□ 0.97
APTR-201ENST00000398043 GPR101Q96P66 508 aaPredicted RBP21.13■□□□□ 0.97
APTR-201ENST00000398043 USP44Q9H0E7 712 aa21.13■□□□□ 0.97
APTR-201ENST00000398043 TAF1DQ9H5J8 278 aaPredicted RBP21.13■□□□□ 0.97
APTR-201ENST00000398043 XDHP47989 1333 aa21.12■□□□□ 0.97
APTR-201ENST00000398043 IQCA1LA6NCM1 817 aa21.12■□□□□ 0.97
APTR-201ENST00000398043 WTIPA6NIX2 430 aaPredicted RBP21.12■□□□□ 0.97
APTR-201ENST00000398043 C6orf229H3BNL8 230 aa21.12■□□□□ 0.97
APTR-201ENST00000398043 FSTL1Q12841 308 aa21.12■□□□□ 0.97
APTR-201ENST00000398043 LMBR1LQ6UX01 489 aa21.12■□□□□ 0.97
APTR-201ENST00000398043 HSPA6P17066 643 aa21.11■□□□□ 0.97
APTR-201ENST00000398043 SCNN1DP51172 638 aa21.11■□□□□ 0.97
APTR-201ENST00000398043 ANKIB1Q9P2G1 1089 aa21.11■□□□□ 0.97
APTR-201ENST00000398043 GGA1Q9UJY5 639 aa21.11■□□□□ 0.97
APTR-201ENST00000398043 ANKRD18BA2A2Z9 1011 aa21.1■□□□□ 0.97
APTR-201ENST00000398043 UFL1O94874 794 aa21.1■□□□□ 0.97
APTR-201ENST00000398043 POTEIP0CG38 1075 aa21.1■□□□□ 0.97
APTR-201ENST00000398043 POTEJP0CG39 1038 aa21.1■□□□□ 0.97
APTR-201ENST00000398043 IGHMBP2P38935 993 aaKnown RBP21.1■□□□□ 0.97
APTR-201ENST00000398043 RABL6Q3YEC7 729 aaPredicted RBP21.1■□□□□ 0.97
APTR-201ENST00000398043 SMC1BQ8NDV3 1235 aa21.1■□□□□ 0.97
APTR-201ENST00000398043 ARHGAP45Q92619 1136 aa21.1■□□□□ 0.97
APTR-201ENST00000398043 EYA3Q99504 573 aa21.1■□□□□ 0.97
APTR-201ENST00000398043 HACL1Q9UJ83 578 aa21.1■□□□□ 0.97
APTR-201ENST00000398043 GJA3Q9Y6H8 435 aa21.1■□□□□ 0.97
APTR-201ENST00000398043 POLR2AP24928 1970 aaKnown RBP21.09■□□□□ 0.97
APTR-201ENST00000398043 RIMBP2O15034 1052 aa21.09■□□□□ 0.97
APTR-201ENST00000398043 ATP2B4P23634 1241 aa21.09■□□□□ 0.97
APTR-201ENST00000398043 ANKRD44Q8N8A2 993 aa21.09■□□□□ 0.97
APTR-201ENST00000398043 DBNDD1Q9H9R9 158 aa21.09■□□□□ 0.97
APTR-201ENST00000398043 CEP350Q5VT06 3117 aa21.09■□□□□ 0.97
APTR-201ENST00000398043 KIF16BQ96L93 1317 aa21.08■□□□□ 0.97
APTR-201ENST00000398043 BCAR3O75815 825 aa21.08■□□□□ 0.97
APTR-201ENST00000398043 IFIT5Q13325 482 aaKnown RBP21.08■□□□□ 0.97
APTR-201ENST00000398043 CIAPIN1Q6FI81 312 aa21.08■□□□□ 0.97
APTR-201ENST00000398043 API5Q9BZZ5 524 aaKnown RBP21.08■□□□□ 0.97
APTR-201ENST00000398043 ECE2O60344 883 aa21.07■□□□□ 0.96
APTR-201ENST00000398043 RAD17O75943 681 aa21.07■□□□□ 0.96
APTR-201ENST00000398043 EPHX2P34913 555 aa21.07■□□□□ 0.96
APTR-201ENST00000398043 CCT4P50991 539 aaKnown RBP21.07■□□□□ 0.96
APTR-201ENST00000398043 ZC3H12CQ9C0D7 883 aaKnown RBP21.07■□□□□ 0.96
APTR-201ENST00000398043 BICC1Q9H694 974 aaKnown RBP21.07■□□□□ 0.96
APTR-201ENST00000398043 KCNQ5Q9NR82 932 aa21.07■□□□□ 0.96
APTR-201ENST00000398043 MED23Q9ULK4 1368 aa21.07■□□□□ 0.96
APTR-201ENST00000398043 EPS15P42566 896 aa21.06■□□□□ 0.96
APTR-201ENST00000398043 DOK7Q18PE1 504 aa21.06■□□□□ 0.96
APTR-201ENST00000398043 MPHOSPH8Q99549 860 aa21.06■□□□□ 0.96
APTR-201ENST00000398043 IRS2Q9Y4H2 1338 aa21.05■□□□□ 0.96
APTR-201ENST00000398043 CHRNDQ07001 517 aa21.05■□□□□ 0.96
APTR-201ENST00000398043 TNIP1Q15025 636 aa21.05■□□□□ 0.96
APTR-201ENST00000398043 CCDC57Q2TAC2 916 aa21.05■□□□□ 0.96
APTR-201ENST00000398043 ZNF594Q96JF6 807 aaPredicted RBP21.05■□□□□ 0.96
APTR-201ENST00000398043 GPRC5DQ9NZD1 345 aa21.05■□□□□ 0.96
APTR-201ENST00000398043 LEMD3Q9Y2U8 911 aa21.05■□□□□ 0.96
APTR-201ENST00000398043 CHMP3Q9Y3E7 222 aa21.05■□□□□ 0.96
APTR-201ENST00000398043 PSMD14O00487 310 aa21.04■□□□□ 0.96
APTR-201ENST00000398043 GMPSP49915 693 aaPredicted RBP21.04■□□□□ 0.96
APTR-201ENST00000398043 INTS3Q68E01 1043 aaKnown RBP21.04■□□□□ 0.96
APTR-201ENST00000398043 CHADLQ6NUI6 762 aa21.04■□□□□ 0.96
APTR-201ENST00000398043 TXNRD3Q86VQ6 643 aa21.04■□□□□ 0.96
APTR-201ENST00000398043 LDHDQ86WU2 507 aa21.04■□□□□ 0.96
APTR-201ENST00000398043 ANKRD2Q9GZV1 360 aa21.04■□□□□ 0.96
APTR-201ENST00000398043 ZNF609O15014 1411 aa21.04■□□□□ 0.96
APTR-201ENST00000398043 TRIM27P14373 513 aa21.03■□□□□ 0.96
APTR-201ENST00000398043 PNMA8AQ86V59 439 aaPredicted RBP21.03■□□□□ 0.96
APTR-201ENST00000398043 TNNQ9UQP3 1299 aa21.03■□□□□ 0.96
APTR-201ENST00000398043 TRPM7Q96QT4 1865 aa21.03■□□□□ 0.96
APTR-201ENST00000398043 ZNF804BA4D1E1 1349 aa21.03■□□□□ 0.96
APTR-201ENST00000398043 VIL1P09327 827 aaKnown RBP21.01■□□□□ 0.95
APTR-201ENST00000398043 KLRK1P26718 216 aa21.01■□□□□ 0.95
APTR-201ENST00000398043 LMOD1P29536 600 aaPredicted RBP21.01■□□□□ 0.95
APTR-201ENST00000398043 APLP1P51693 650 aa21.01■□□□□ 0.95
APTR-201ENST00000398043 ATF7IPQ6VMQ6 1270 aa21.01■□□□□ 0.95
APTR-201ENST00000398043 LDHAL6AQ6ZMR3 332 aa21.01■□□□□ 0.95
APTR-201ENST00000398043 C15orf52Q6ZUT6 534 aaKnown RBP21.01■□□□□ 0.95
APTR-201ENST00000398043 PUS3Q9BZE2 481 aaKnown RBP21.01■□□□□ 0.95
APTR-201ENST00000398043 SHTN1A0MZ66 631 aa21■□□□□ 0.95
APTR-201ENST00000398043 SNAP23O00161 211 aa21■□□□□ 0.95
APTR-201ENST00000398043 IPO8O15397 1037 aaKnown RBP21■□□□□ 0.95
APTR-201ENST00000398043 TAF5LO75529 589 aa21■□□□□ 0.95
APTR-201ENST00000398043 EAPPQ56P03 285 aaPredicted RBP21■□□□□ 0.95
APTR-201ENST00000398043 PODNQ7Z5L7 613 aa21■□□□□ 0.95
APTR-201ENST00000398043 HELBQ8NG08 1087 aaPredicted RBP21■□□□□ 0.95
APTR-201ENST00000398043 DPF2Q92785 391 aa21■□□□□ 0.95
APTR-201ENST00000398043 ZBTB12Q9Y330 459 aaPredicted RBP21■□□□□ 0.95
APTR-201ENST00000398043 RIPOR2Q9Y4F9 1068 aa21■□□□□ 0.95
APTR-201ENST00000398043 ITGBL1O95965 494 aaPredicted RBP20.99■□□□□ 0.95
APTR-201ENST00000398043 RFX5P48382 616 aaPredicted RBP20.99■□□□□ 0.95
APTR-201ENST00000398043 USP50Q70EL3 339 aaPredicted RBP20.99■□□□□ 0.95
APTR-201ENST00000398043 ADARB2Q9NS39 739 aaKnown RBP20.99■□□□□ 0.95
APTR-201ENST00000398043 PASKQ96RG2 1323 aa20.99■□□□□ 0.95
APTR-201ENST00000398043 MEIS3Q99687 375 aa20.98■□□□□ 0.95
APTR-201ENST00000398043 COA1Q9GZY4 146 aa20.98■□□□□ 0.95
APTR-201ENST00000398043 CNOT7Q9UIV1 285 aaKnown RBP20.98■□□□□ 0.95
APTR-201ENST00000398043 UBTFL1P0CB47 393 aaPredicted RBP20.97■□□□□ 0.95
APTR-201ENST00000398043 RPS12P25398 132 aaKnown RBP20.97■□□□□ 0.95
APTR-201ENST00000398043 HIRAP54198 1017 aaPredicted RBP20.97■□□□□ 0.95
APTR-201ENST00000398043 TAF7LQ5H9L4 462 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms