RNA–Protein interactions for RNA: ENST00000398017.2

CHEK2-205, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 713 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-205ENST00000398017 PPP1R18Q6NYC8 613 aa10.59□□□□□ -0.71
CHEK2-205ENST00000398017 RIC3Q7Z5B4 369 aa10.59□□□□□ -0.71
CHEK2-205ENST00000398017 THAP11Q96EK4 314 aa10.59□□□□□ -0.71
CHEK2-205ENST00000398017 USB1Q9BQ65 265 aaKnown RBP10.59□□□□□ -0.71
CHEK2-205ENST00000398017 NARFQ9UHQ1 456 aa10.59□□□□□ -0.71
CHEK2-205ENST00000398017 UBR3Q6ZT12 1888 aa10.59□□□□□ -0.71
CHEK2-205ENST00000398017 MYBBP1AQ9BQG0 1328 aaKnown RBP10.58□□□□□ -0.71
CHEK2-205ENST00000398017 ZNF831Q5JPB2 1677 aa10.58□□□□□ -0.72
CHEK2-205ENST00000398017 C6orf229H3BNL8 230 aa10.58□□□□□ -0.72
CHEK2-205ENST00000398017 SNRPA1P09661 255 aaKnown RBP10.58□□□□□ -0.72
CHEK2-205ENST00000398017 RIPK4P57078 832 aa10.58□□□□□ -0.72
CHEK2-205ENST00000398017 NFE2L2Q16236 605 aa10.58□□□□□ -0.72
CHEK2-205ENST00000398017 MSS51Q4VC12 460 aa10.58□□□□□ -0.72
CHEK2-205ENST00000398017 RSBN1LQ6PCB5 846 aaPredicted RBP10.58□□□□□ -0.72
CHEK2-205ENST00000398017 SRP68Q9UHB9 627 aaKnown RBP10.58□□□□□ -0.72
CHEK2-205ENST00000398017 HEG1Q9ULI3 1381 aa10.57□□□□□ -0.72
CHEK2-205ENST00000398017 NPHP1O15259 732 aa10.57□□□□□ -0.72
CHEK2-205ENST00000398017 SPTLC1O15269 473 aa10.57□□□□□ -0.72
CHEK2-205ENST00000398017 MYSM1Q5VVJ2 828 aa10.57□□□□□ -0.72
CHEK2-205ENST00000398017 RETREG3Q86VR2 466 aa10.57□□□□□ -0.72
CHEK2-205ENST00000398017 JMYQ8N9B5 988 aa10.57□□□□□ -0.72
CHEK2-205ENST00000398017 FAM117AQ9C073 453 aa10.57□□□□□ -0.72
CHEK2-205ENST00000398017 ZBTB1Q9Y2K1 713 aa10.57□□□□□ -0.72
CHEK2-205ENST00000398017 USP42Q9H9J4 1324 aaKnown RBP10.57□□□□□ -0.72
CHEK2-205ENST00000398017 A0A0G2JLW4 131 aa10.56□□□□□ -0.72
CHEK2-205ENST00000398017 KCNQ3O43525 872 aa10.56□□□□□ -0.72
CHEK2-205ENST00000398017 A1BGP04217 495 aa10.56□□□□□ -0.72
CHEK2-205ENST00000398017 NDUFV2P19404 249 aa10.56□□□□□ -0.72
CHEK2-205ENST00000398017 GUCA2AQ02747 115 aa10.56□□□□□ -0.72
CHEK2-205ENST00000398017 LMOD3Q0VAK6 560 aa10.56□□□□□ -0.72
CHEK2-205ENST00000398017 MTMR2Q13614 643 aa10.56□□□□□ -0.72
CHEK2-205ENST00000398017 PRPF38BQ5VTL8 546 aaKnown RBP10.56□□□□□ -0.72
CHEK2-205ENST00000398017 RNF19BQ6ZMZ0 732 aa10.56□□□□□ -0.72
CHEK2-205ENST00000398017 BICDL1Q6ZP65 573 aa10.56□□□□□ -0.72
CHEK2-205ENST00000398017 HLA-CQ95604 372 aa10.56□□□□□ -0.72
CHEK2-205ENST00000398017 PLEKHF1Q96S99 279 aa10.56□□□□□ -0.72
CHEK2-205ENST00000398017 MIS18AQ9NYP9 233 aa10.56□□□□□ -0.72
CHEK2-205ENST00000398017 VIRMAQ69YN4 1812 aaKnown RBP10.56□□□□□ -0.72
CHEK2-205ENST00000398017 SOS1Q07889 1333 aaPredicted RBP10.56□□□□□ -0.72
CHEK2-205ENST00000398017 COL24A1Q17RW2 1714 aa10.55□□□□□ -0.72
CHEK2-205ENST00000398017 CEMIPQ8WUJ3 1361 aa10.55□□□□□ -0.72
CHEK2-205ENST00000398017 S1PR4O95977 384 aa10.55□□□□□ -0.72
CHEK2-205ENST00000398017 TM4SF1P30408 202 aa10.55□□□□□ -0.72
CHEK2-205ENST00000398017 IL6STP40189 918 aaPredicted RBP10.55□□□□□ -0.72
CHEK2-205ENST00000398017 CLK2P49760 499 aaKnown RBP10.55□□□□□ -0.72
CHEK2-205ENST00000398017 EIF5P55010 431 aaKnown RBP10.55□□□□□ -0.72
CHEK2-205ENST00000398017 TUSC1Q2TAM9 212 aa10.55□□□□□ -0.72
CHEK2-205ENST00000398017 ANKLE1Q8NAG6 615 aa10.55□□□□□ -0.72
CHEK2-205ENST00000398017 ZBTB3Q9H5J0 574 aa10.55□□□□□ -0.72
CHEK2-205ENST00000398017 PIM2Q9P1W9 311 aa10.55□□□□□ -0.72
CHEK2-205ENST00000398017 TBC1D2BQ9UPU7 963 aa10.55□□□□□ -0.72
CHEK2-205ENST00000398017 BCS1LQ9Y276 419 aa10.55□□□□□ -0.72
CHEK2-205ENST00000398017 USP16Q9Y5T5 823 aa10.55□□□□□ -0.72
CHEK2-205ENST00000398017 COL15A1P39059 1388 aa10.54□□□□□ -0.72
CHEK2-205ENST00000398017 SERPINB2P05120 415 aa10.54□□□□□ -0.72
CHEK2-205ENST00000398017 YBX3P16989 372 aaKnown RBP eCLIP10.54□□□□□ -0.722e-8■□□□□ 8.6
CHEK2-205ENST00000398017 SH3D19Q5HYK7 790 aa10.54□□□□□ -0.72
CHEK2-205ENST00000398017 RUNDC1Q96C34 613 aa10.54□□□□□ -0.72
CHEK2-205ENST00000398017 PRKRIP1Q9H875 184 aaPredicted RBP10.54□□□□□ -0.72
CHEK2-205ENST00000398017 MRC1P22897 1456 aa10.54□□□□□ -0.72
CHEK2-205ENST00000398017 COL5A3P25940 1745 aaPredicted RBP10.53□□□□□ -0.72
CHEK2-205ENST00000398017 DPEP1P16444 411 aa10.53□□□□□ -0.72
CHEK2-205ENST00000398017 MLLT1Q03111 559 aaPredicted RBP10.53□□□□□ -0.72
CHEK2-205ENST00000398017 SKIV2LQ15477 1246 aaKnown RBP10.53□□□□□ -0.72
CHEK2-205ENST00000398017 ARHGAP27Q6ZUM4 889 aa10.53□□□□□ -0.72
CHEK2-205ENST00000398017 DZIP3Q86Y13 1208 aaKnown RBP10.53□□□□□ -0.72
CHEK2-205ENST00000398017 CCDC146Q8IYE0 955 aa10.53□□□□□ -0.72
CHEK2-205ENST00000398017 SETDB2Q96T68 719 aa10.53□□□□□ -0.72
CHEK2-205ENST00000398017 LAS1LQ9Y4W2 734 aaKnown RBP10.53□□□□□ -0.72
CHEK2-205ENST00000398017 MYH14Q7Z406 1995 aaKnown RBP10.53□□□□□ -0.72
CHEK2-205ENST00000398017 RNF223E7ERA6 249 aa10.52□□□□□ -0.73
CHEK2-205ENST00000398017 POLRMTO00411 1230 aaKnown RBP10.52□□□□□ -0.73
CHEK2-205ENST00000398017 TMPOP42166 694 aaKnown RBP10.52□□□□□ -0.73
CHEK2-205ENST00000398017 NFIXQ14938 502 aa10.52□□□□□ -0.73
CHEK2-205ENST00000398017 NGEFQ8N5V2 710 aa10.52□□□□□ -0.73
CHEK2-205ENST00000398017 TSPYL4Q9UJ04 414 aa10.52□□□□□ -0.73
CHEK2-205ENST00000398017 PCDHGC3Q9UN70 934 aa10.52□□□□□ -0.73
CHEK2-205ENST00000398017 ADAMTS8Q9UP79 889 aa10.52□□□□□ -0.73
CHEK2-205ENST00000398017 ZNF652Q9Y2D9 606 aa10.52□□□□□ -0.73
CHEK2-205ENST00000398017 RRP7AQ9Y3A4 280 aaKnown RBP10.52□□□□□ -0.73
CHEK2-205ENST00000398017 KCPQ6ZWJ8 1503 aa10.52□□□□□ -0.73
CHEK2-205ENST00000398017 ADAMTS7Q9UKP4 1686 aa10.51□□□□□ -0.73
CHEK2-205ENST00000398017 TJP1Q07157 1748 aa10.51□□□□□ -0.73
CHEK2-205ENST00000398017 H0YIN7 160 aa10.51□□□□□ -0.73
CHEK2-205ENST00000398017 ANP32CO43423 234 aa10.51□□□□□ -0.73
CHEK2-205ENST00000398017 GTF2E1P29083 439 aaPredicted RBP10.51□□□□□ -0.73
CHEK2-205ENST00000398017 DALRD3Q5D0E6 543 aaKnown RBP10.51□□□□□ -0.73
CHEK2-205ENST00000398017 FAM160A2Q8N612 972 aaPredicted RBP10.51□□□□□ -0.73
CHEK2-205ENST00000398017 THUMPD2Q9BTF0 503 aaKnown RBP10.51□□□□□ -0.73
CHEK2-205ENST00000398017 GOPCQ9HD26 462 aa10.51□□□□□ -0.73
CHEK2-205ENST00000398017 PRAMEF22A3QJZ6 481 aa10.5□□□□□ -0.73
CHEK2-205ENST00000398017 EIF2S2P20042 333 aaKnown RBP10.5□□□□□ -0.73
CHEK2-205ENST00000398017 PDE6BP35913 854 aa10.5□□□□□ -0.73
CHEK2-205ENST00000398017 PIP4K2AP48426 406 aaPredicted RBP10.5□□□□□ -0.73
CHEK2-205ENST00000398017 EIF4A1P60842 406 aaKnown RBP10.5□□□□□ -0.73
CHEK2-205ENST00000398017 DDR1Q08345 913 aa10.5□□□□□ -0.73
CHEK2-205ENST00000398017 TBC1D9BQ66K14 1250 aa10.5□□□□□ -0.73
CHEK2-205ENST00000398017 CLEC4GQ6UXB4 293 aa10.5□□□□□ -0.73
CHEK2-205ENST00000398017 IL27Q8NEV9 243 aa10.5□□□□□ -0.73
CHEK2-205ENST00000398017 POLR3EQ9NVU0 708 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms