RNA–Protein interactions for RNA: ENST00000397838.7

CEP290-202, Transcript of centrosomal protein 290, humanhuman

TSL 5 BASIC

Gene CEP290, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-202ENST00000397838 GTF2E1P29083 439 aaPredicted RBP8.55□□□□□ -1.04
CEP290-202ENST00000397838 NFE2L2Q16236 605 aa8.55□□□□□ -1.04
CEP290-202ENST00000397838 TMEM74Q96NL1 305 aa8.55□□□□□ -1.04
CEP290-202ENST00000397838 POLMQ9NP87 494 aaPredicted RBP8.55□□□□□ -1.04
CEP290-202ENST00000397838 POTECB2RU33 542 aa8.55□□□□□ -1.04
CEP290-202ENST00000397838 GARTP22102 1010 aa8.55□□□□□ -1.04
CEP290-202ENST00000397838 CES1P23141 567 aa8.55□□□□□ -1.04
CEP290-202ENST00000397838 NFX1Q12986 1120 aaKnown RBP8.55□□□□□ -1.04
CEP290-202ENST00000397838 CELF2-AS1Q8N7Q2 184 aa8.55□□□□□ -1.04
CEP290-202ENST00000397838 FAM169BQ8N8A8 192 aa8.55□□□□□ -1.04
CEP290-202ENST00000397838 ANAPC16Q96DE5 110 aa8.55□□□□□ -1.04
CEP290-202ENST00000397838 EHD4Q9H223 541 aa8.55□□□□□ -1.04
CEP290-202ENST00000397838 TATP17735 454 aaPredicted RBP8.54□□□□□ -1.04
CEP290-202ENST00000397838 HSD3B2P26439 372 aa8.54□□□□□ -1.04
CEP290-202ENST00000397838 NBPF10Q6P3W6 841 aaKnown RBP8.54□□□□□ -1.04
CEP290-202ENST00000397838 OXCT2Q9BYC2 517 aaPredicted RBP8.54□□□□□ -1.04
CEP290-202ENST00000397838 RHOQP17081 205 aa8.54□□□□□ -1.04
CEP290-202ENST00000397838 GPC1P35052 558 aa8.54□□□□□ -1.04
CEP290-202ENST00000397838 SOX9P48436 509 aa8.54□□□□□ -1.04
CEP290-202ENST00000397838 ZNF697Q5TEC3 545 aa8.54□□□□□ -1.04
CEP290-202ENST00000397838 TPTE2Q6XPS3 522 aa8.54□□□□□ -1.04
CEP290-202ENST00000397838 KRT25Q7Z3Z0 450 aa8.54□□□□□ -1.04
CEP290-202ENST00000397838 PPT2Q9UMR5 302 aa8.54□□□□□ -1.04
CEP290-202ENST00000397838 AKAP2Q9Y2D5 859 aa8.54□□□□□ -1.04
CEP290-202ENST00000397838 RAB33AQ14088 237 aa8.53□□□□□ -1.04
CEP290-202ENST00000397838 hCG_2014768A0A024R1R8 64 aa8.53□□□□□ -1.04
CEP290-202ENST00000397838 METTL12A8MUP2 240 aa8.53□□□□□ -1.04
CEP290-202ENST00000397838 GRIN2CQ14957 1233 aa8.53□□□□□ -1.04
CEP290-202ENST00000397838 HIF1AQ16665 826 aa8.53□□□□□ -1.04
CEP290-202ENST00000397838 KANK3Q6NY19 840 aa8.53□□□□□ -1.04
CEP290-202ENST00000397838 PHC3Q8NDX5 983 aa8.53□□□□□ -1.04
CEP290-202ENST00000397838 CEP63Q96MT8 703 aa8.53□□□□□ -1.04
CEP290-202ENST00000397838 CNTNAP3BQ96NU0 1288 aa8.53□□□□□ -1.04
CEP290-202ENST00000397838 CNTNAP3Q9BZ76 1288 aa8.53□□□□□ -1.04
CEP290-202ENST00000397838 SPATA31C2B4DYI2 1134 aa8.52□□□□□ -1.05
CEP290-202ENST00000397838 SASH3O75995 380 aa8.52□□□□□ -1.05
CEP290-202ENST00000397838 PF4P02776 101 aa8.52□□□□□ -1.05
CEP290-202ENST00000397838 TARSP26639 723 aaKnown RBP8.52□□□□□ -1.05
CEP290-202ENST00000397838 PLD4Q96BZ4 506 aa8.52□□□□□ -1.05
CEP290-202ENST00000397838 SPINT1O43278 529 aa8.52□□□□□ -1.05
CEP290-202ENST00000397838 KIAA0319Q5VV43 1072 aa8.52□□□□□ -1.05
CEP290-202ENST00000397838 RNF217Q8TC41 542 aa8.52□□□□□ -1.05
CEP290-202ENST00000397838 DEPDC7Q96QD5 511 aa8.52□□□□□ -1.05
CEP290-202ENST00000397838 HHIPQ96QV1 700 aa8.52□□□□□ -1.05
CEP290-202ENST00000397838 GPAMQ9HCL2 828 aa8.52□□□□□ -1.05
CEP290-202ENST00000397838 IFT57Q9NWB7 429 aa8.52□□□□□ -1.05
CEP290-202ENST00000397838 A0A1W2PNR3 127 aa8.51□□□□□ -1.05
CEP290-202ENST00000397838 COL13A1Q5TAT6 717 aaPredicted RBP8.51□□□□□ -1.05
CEP290-202ENST00000397838 RELL1Q8IUW5 271 aa8.51□□□□□ -1.05
CEP290-202ENST00000397838 GOLM1Q8NBJ4 401 aa8.51□□□□□ -1.05
CEP290-202ENST00000397838 FBXO27Q8NI29 283 aa8.51□□□□□ -1.05
CEP290-202ENST00000397838 HPS1Q92902 700 aa8.51□□□□□ -1.05
CEP290-202ENST00000397838 TCF12Q99081 682 aa8.51□□□□□ -1.05
CEP290-202ENST00000397838 TRIM55Q9BYV6 548 aa8.51□□□□□ -1.05
CEP290-202ENST00000397838 TNFRSF10AO00220 468 aa8.51□□□□□ -1.05
CEP290-202ENST00000397838 ENPP3O14638 875 aa8.51□□□□□ -1.05
CEP290-202ENST00000397838 PAGE1O75459 146 aa8.51□□□□□ -1.05
CEP290-202ENST00000397838 MSX1P28360 303 aa8.51□□□□□ -1.05
CEP290-202ENST00000397838 NBPF6Q5VWK0 638 aa8.51□□□□□ -1.05
CEP290-202ENST00000397838 FILIP1Q7Z7B0 1213 aa8.51□□□□□ -1.05
CEP290-202ENST00000397838 NLRP13Q86W25 1043 aa8.51□□□□□ -1.05
CEP290-202ENST00000397838 LINC00528Q8N1L1 170 aa8.51□□□□□ -1.05
CEP290-202ENST00000397838 SNIP1Q8TAD8 396 aaKnown RBP8.51□□□□□ -1.05
CEP290-202ENST00000397838 NBPF4Q96M43 638 aa8.51□□□□□ -1.05
CEP290-202ENST00000397838 BRD7Q9NPI1 651 aa8.51□□□□□ -1.05
CEP290-202ENST00000397838 HCN2Q9UL51 889 aa8.51□□□□□ -1.05
CEP290-202ENST00000397838 LILRB2Q8N423 598 aa8.5□□□□□ -1.05
CEP290-202ENST00000397838 SHDQ96IW2 340 aa8.5□□□□□ -1.05
CEP290-202ENST00000397838 POLR3GLQ9BT43 218 aa8.5□□□□□ -1.05
CEP290-202ENST00000397838 KCNQ5Q9NR82 932 aa8.5□□□□□ -1.05
CEP290-202ENST00000397838 ANKIB1Q9P2G1 1089 aa8.5□□□□□ -1.05
CEP290-202ENST00000397838 GREM1O60565 184 aa8.5□□□□□ -1.05
CEP290-202ENST00000397838 MMP20O60882 483 aa8.5□□□□□ -1.05
CEP290-202ENST00000397838 GRIA4P48058 902 aa8.5□□□□□ -1.05
CEP290-202ENST00000397838 RPUSD2Q8IZ73 545 aaKnown RBP8.5□□□□□ -1.05
CEP290-202ENST00000397838 ZKSCAN3Q9BRR0 538 aa8.5□□□□□ -1.05
CEP290-202ENST00000397838 RUBCNLQ9H714 662 aa8.5□□□□□ -1.05
CEP290-202ENST00000397838 COL4A3BPQ9Y5P4 624 aa8.5□□□□□ -1.05
CEP290-202ENST00000397838 SMPD1P17405 629 aa8.49□□□□□ -1.05
CEP290-202ENST00000397838 IGBP1P78318 339 aa8.49□□□□□ -1.05
CEP290-202ENST00000397838 PCNX4Q63HM2 1172 aa8.49□□□□□ -1.05
CEP290-202ENST00000397838 SH3TC2Q8TF17 1288 aa8.49□□□□□ -1.05
CEP290-202ENST00000397838 NT5C1AQ9BXI3 368 aa8.49□□□□□ -1.05
CEP290-202ENST00000397838 ZFATQ9P243 1243 aa8.49□□□□□ -1.05
CEP290-202ENST00000397838 ENC1O14682 589 aa8.49□□□□□ -1.05
CEP290-202ENST00000397838 EGFRP00533 1210 aa8.49□□□□□ -1.05
CEP290-202ENST00000397838 TFE3P19532 575 aaPredicted RBP8.49□□□□□ -1.05
CEP290-202ENST00000397838 LIG3P49916 1009 aa8.49□□□□□ -1.05
CEP290-202ENST00000397838 RASIP1Q5U651 963 aa8.49□□□□□ -1.05
CEP290-202ENST00000397838 PRPF40BQ6NWY9 871 aaKnown RBP8.49□□□□□ -1.05
CEP290-202ENST00000397838 ST7Q9NRC1 585 aa8.49□□□□□ -1.05
CEP290-202ENST00000397838 TMEM238LA0A1B0GVL6 79 aa8.48□□□□□ -1.05
CEP290-202ENST00000397838 SMAD7O15105 426 aaKnown RBP8.48□□□□□ -1.05
CEP290-202ENST00000397838 CAMK2GQ13555 558 aaPredicted RBP8.48□□□□□ -1.05
CEP290-202ENST00000397838 DTHD1Q6ZMT9 781 aa8.48□□□□□ -1.05
CEP290-202ENST00000397838 ANKRD24Q8TF21 1146 aa8.48□□□□□ -1.05
CEP290-202ENST00000397838 LIN7BQ9HAP6 207 aa8.48□□□□□ -1.05
CEP290-202ENST00000397838 FANCLQ9NW38 375 aa8.48□□□□□ -1.05
CEP290-202ENST00000397838 SIRPGQ9P1W8 387 aa8.48□□□□□ -1.05
CEP290-202ENST00000397838 TLR3O15455 904 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms