RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 PROSER3Q2NL68 480 aa6.98□□□□□ -1.29
PTPRD-206ENST00000397617 CCDC152Q4G0S7 254 aa6.98□□□□□ -1.29
PTPRD-206ENST00000397617 ZGPATQ8N5A5 531 aaKnown RBP6.98□□□□□ -1.29
PTPRD-206ENST00000397617 RNF41Q9H4P4 317 aaPredicted RBP6.98□□□□□ -1.29
PTPRD-206ENST00000397617 NHSQ6T4R5 1651 aa6.98□□□□□ -1.29
PTPRD-206ENST00000397617 CDKL5O76039 1030 aa6.98□□□□□ -1.29
PTPRD-206ENST00000397617 IFIT1P09914 478 aaKnown RBP6.98□□□□□ -1.29
PTPRD-206ENST00000397617 CNNM2Q9H8M5 875 aa6.98□□□□□ -1.29
PTPRD-206ENST00000397617 TBC1D2BQ9UPU7 963 aa6.98□□□□□ -1.29
PTPRD-206ENST00000397617 TRIM6-TRIM34B2RNG4 842 aa6.98□□□□□ -1.29
PTPRD-206ENST00000397617 GTPBP4Q9BZE4 634 aaKnown RBP6.98□□□□□ -1.29
PTPRD-206ENST00000397617 ANKRD2Q9GZV1 360 aa6.98□□□□□ -1.29
PTPRD-206ENST00000397617 C10orf71Q711Q0 1435 aa6.98□□□□□ -1.29
PTPRD-206ENST00000397617 HOXA10P31260 410 aaPredicted RBP6.98□□□□□ -1.29
PTPRD-206ENST00000397617 ATP2B3Q16720 1220 aa6.98□□□□□ -1.29
PTPRD-206ENST00000397617 C1orf115Q9H7X2 142 aa6.98□□□□□ -1.29
PTPRD-206ENST00000397617 NARFQ9UHQ1 456 aa6.98□□□□□ -1.29
PTPRD-206ENST00000397617 RIPOR2Q9Y4F9 1068 aa6.98□□□□□ -1.29
PTPRD-206ENST00000397617 CCDC196A0A1B0GTZ2 297 aa6.98□□□□□ -1.29
PTPRD-206ENST00000397617 KCNQ3O43525 872 aa6.98□□□□□ -1.29
PTPRD-206ENST00000397617 TAF5LO75529 589 aa6.98□□□□□ -1.29
PTPRD-206ENST00000397617 PUM3Q15397 648 aaKnown RBP6.98□□□□□ -1.29
PTPRD-206ENST00000397617 CCDC34Q96HJ3 373 aa6.98□□□□□ -1.29
PTPRD-206ENST00000397617 TCHHQ07283 1943 aa6.98□□□□□ -1.29
PTPRD-206ENST00000397617 TTLL11Q8NHH1 800 aa6.97□□□□□ -1.29
PTPRD-206ENST00000397617 RPS6KA4O75676 772 aa6.97□□□□□ -1.29
PTPRD-206ENST00000397617 XPCQ01831 940 aaPredicted RBP6.97□□□□□ -1.29
PTPRD-206ENST00000397617 DHX32Q7L7V1 743 aaKnown RBP6.97□□□□□ -1.29
PTPRD-206ENST00000397617 DNAJC10Q8IXB1 793 aa6.97□□□□□ -1.29
PTPRD-206ENST00000397617 TMEM87BQ96K49 555 aa6.97□□□□□ -1.29
PTPRD-206ENST00000397617 TRPC5Q9UL62 973 aaPredicted RBP6.97□□□□□ -1.29
PTPRD-206ENST00000397617 COL24A1Q17RW2 1714 aa6.97□□□□□ -1.29
PTPRD-206ENST00000397617 ARID4AP29374 1257 aaPredicted RBP6.97□□□□□ -1.29
PTPRD-206ENST00000397617 FOXO4P98177 505 aa6.97□□□□□ -1.29
PTPRD-206ENST00000397617 CC2D2BQ6DHV5 1058 aa6.97□□□□□ -1.29
PTPRD-206ENST00000397617 SGMS1Q86VZ5 419 aa6.97□□□□□ -1.29
PTPRD-206ENST00000397617 FSD1Q9BTV5 496 aa6.97□□□□□ -1.29
PTPRD-206ENST00000397617 SCN7AQ01118 1682 aa6.97□□□□□ -1.29
PTPRD-206ENST00000397617 MAP3K14Q99558 947 aa6.97□□□□□ -1.29
PTPRD-206ENST00000397617 NPM3O75607 178 aaKnown RBP6.96□□□□□ -1.29
PTPRD-206ENST00000397617 CWF19L2Q2TBE0 894 aaKnown RBP6.96□□□□□ -1.29
PTPRD-206ENST00000397617 ATG9AQ7Z3C6 839 aa6.96□□□□□ -1.29
PTPRD-206ENST00000397617 ARXQ96QS3 562 aa6.96□□□□□ -1.29
PTPRD-206ENST00000397617 LY75O60449 1722 aa6.96□□□□□ -1.29
PTPRD-206ENST00000397617 CT47A1Q5JQC4 288 aaPredicted RBP6.96□□□□□ -1.29
PTPRD-206ENST00000397617 VGLL2Q8N8G2 317 aa6.96□□□□□ -1.29
PTPRD-206ENST00000397617 NACAP1Q9BZK3 213 aa6.96□□□□□ -1.29
PTPRD-206ENST00000397617 BCORQ6W2J9 1755 aa6.96□□□□□ -1.29
PTPRD-206ENST00000397617 BMP15O95972 392 aa6.96□□□□□ -1.29
PTPRD-206ENST00000397617 TMX3Q96JJ7 454 aa6.96□□□□□ -1.29
PTPRD-206ENST00000397617 MYD88Q99836 296 aa6.96□□□□□ -1.29
PTPRD-206ENST00000397617 CFAP45Q9UL16 551 aa6.96□□□□□ -1.29
PTPRD-206ENST00000397617 MYO1BO43795 1136 aa6.96□□□□□ -1.3
PTPRD-206ENST00000397617 ELOA2Q8IYF1 753 aaPredicted RBP6.96□□□□□ -1.3
PTPRD-206ENST00000397617 DOT1LQ8TEK3 1739 aa6.96□□□□□ -1.3
PTPRD-206ENST00000397617 CTSWP56202 376 aa6.96□□□□□ -1.3
PTPRD-206ENST00000397617 SALL1Q9NSC2 1324 aa6.96□□□□□ -1.3
PTPRD-206ENST00000397617 NCLP19338 710 aaKnown RBP6.96□□□□□ -1.3
PTPRD-206ENST00000397617 FGFR2P21802 821 aa6.96□□□□□ -1.3
PTPRD-206ENST00000397617 MYO3BQ8WXR4 1341 aa6.96□□□□□ -1.3
PTPRD-206ENST00000397617 SLKQ9H2G2 1235 aaPredicted RBP6.96□□□□□ -1.3
PTPRD-206ENST00000397617 KLRG2A4D1S0 409 aaPredicted RBP6.95□□□□□ -1.3
PTPRD-206ENST00000397617 RNF113AO15541 343 aaKnown RBP6.95□□□□□ -1.3
PTPRD-206ENST00000397617 MAP3K12Q12852 859 aa6.95□□□□□ -1.3
PTPRD-206ENST00000397617 UVSSAQ2YD98 709 aa6.95□□□□□ -1.3
PTPRD-206ENST00000397617 PAG1Q9NWQ8 432 aa6.95□□□□□ -1.3
PTPRD-206ENST00000397617 CTAGE5O15320 804 aa6.95□□□□□ -1.3
PTPRD-206ENST00000397617 SLC39A6Q13433 755 aa6.95□□□□□ -1.3
PTPRD-206ENST00000397617 TPTE2Q6XPS3 522 aa6.95□□□□□ -1.3
PTPRD-206ENST00000397617 DOCK2Q92608 1830 aa6.95□□□□□ -1.3
PTPRD-206ENST00000397617 BAG4O95429 457 aaKnown RBP6.95□□□□□ -1.3
PTPRD-206ENST00000397617 SLC5A1P13866 664 aa6.95□□□□□ -1.3
PTPRD-206ENST00000397617 IGHMBP2P38935 993 aaKnown RBP6.95□□□□□ -1.3
PTPRD-206ENST00000397617 SPTY2D1Q68D10 685 aaPredicted RBP6.95□□□□□ -1.3
PTPRD-206ENST00000397617 STK36Q9NRP7 1315 aa6.95□□□□□ -1.3
PTPRD-206ENST00000397617 LDHAL6AQ6ZMR3 332 aa6.95□□□□□ -1.3
PTPRD-206ENST00000397617 FAM196AQ6ZSG2 479 aa6.95□□□□□ -1.3
PTPRD-206ENST00000397617 TBC1D22AQ8WUA7 517 aa6.95□□□□□ -1.3
PTPRD-206ENST00000397617 FAM163AQ96GL9 167 aaPredicted RBP6.95□□□□□ -1.3
PTPRD-206ENST00000397617 RUFY3Q7L099 469 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 JMYQ8N9B5 988 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 CERKQ8TCT0 537 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 CABLES1Q8TDN4 633 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 UTP14AQ9BVJ6 771 aaKnown RBP6.94□□□□□ -1.3
PTPRD-206ENST00000397617 MRIQ9BWK5 157 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 ZNF287Q9HBT7 754 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 KIAA1551Q9HCM1 1747 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 KCNJ4P48050 445 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 KRT85P78386 507 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 SYNPO2Q9UMS6 1093 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 TPM3P06753 285 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 CAMTA2O94983 1202 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 UBE2HP62256 183 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 WASF1Q92558 559 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 BSDC1Q9NW68 430 aaPredicted RBP6.94□□□□□ -1.3
PTPRD-206ENST00000397617 SENP3-EIF4A1A0A087X0R7 540 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 A0A1B0GUL7 405 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 TRAK2O60296 914 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 PLCG2P16885 1265 aa6.94□□□□□ -1.3
PTPRD-206ENST00000397617 TRDNQ13061 729 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms