RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 CHD1LQ86WJ1 897 aa20.96■□□□□ 0.95
TSPAN4-205ENST00000397406 CNKSR1Q969H4 720 aa20.96■□□□□ 0.95
TSPAN4-205ENST00000397406 CCDC85AQ96PX6 553 aaPredicted RBP20.96■□□□□ 0.95
TSPAN4-205ENST00000397406 SF3B3Q15393 1217 aaKnown RBP20.95■□□□□ 0.95
TSPAN4-205ENST00000397406 CCDC57Q2TAC2 916 aa20.95■□□□□ 0.95
TSPAN4-205ENST00000397406 COL4A1P02462 1669 aa20.95■□□□□ 0.94
TSPAN4-205ENST00000397406 APBB1O00213 710 aa20.95■□□□□ 0.94
TSPAN4-205ENST00000397406 NPR1P16066 1061 aa20.95■□□□□ 0.94
TSPAN4-205ENST00000397406 ITGA6P23229 1130 aa20.95■□□□□ 0.94
TSPAN4-205ENST00000397406 IFIT5Q13325 482 aaKnown RBP20.95■□□□□ 0.94
TSPAN4-205ENST00000397406 CRY2Q49AN0 593 aa20.95■□□□□ 0.94
TSPAN4-205ENST00000397406 CCDC152Q4G0S7 254 aa20.95■□□□□ 0.94
TSPAN4-205ENST00000397406 LNPKQ9C0E8 428 aa20.95■□□□□ 0.94
TSPAN4-205ENST00000397406 RRAGCQ9HB90 399 aa20.95■□□□□ 0.94
TSPAN4-205ENST00000397406 SMARCA5O60264 1052 aaPredicted RBP20.94■□□□□ 0.94
TSPAN4-205ENST00000397406 PDE4AP27815 886 aa20.94■□□□□ 0.94
TSPAN4-205ENST00000397406 ZNF594Q96JF6 807 aaPredicted RBP20.94■□□□□ 0.94
TSPAN4-205ENST00000397406 LRRCC1Q9C099 1032 aa20.94■□□□□ 0.94
TSPAN4-205ENST00000397406 SIL1Q9H173 461 aa20.94■□□□□ 0.94
TSPAN4-205ENST00000397406 FER1L6Q2WGJ9 1857 aa20.94■□□□□ 0.94
TSPAN4-205ENST00000397406 LTBP3Q9NS15 1303 aa20.93■□□□□ 0.94
TSPAN4-205ENST00000397406 ANKRD18BA2A2Z9 1011 aa20.93■□□□□ 0.94
TSPAN4-205ENST00000397406 POTECB2RU33 542 aa20.93■□□□□ 0.94
TSPAN4-205ENST00000397406 TOMM70O94826 608 aa20.93■□□□□ 0.94
TSPAN4-205ENST00000397406 HSPA6P17066 643 aa20.93■□□□□ 0.94
TSPAN4-205ENST00000397406 G3BP1Q13283 466 aaKnown RBP eCLIP20.93■□□□□ 0.94
TSPAN4-205ENST00000397406 RHPN1Q8TCX5 695 aa20.93■□□□□ 0.94
TSPAN4-205ENST00000397406 NLRP3Q96P20 1036 aa20.93■□□□□ 0.94
TSPAN4-205ENST00000397406 SNED1Q8TER0 1413 aa20.93■□□□□ 0.94
TSPAN4-205ENST00000397406 SASH1O94885 1247 aa20.92■□□□□ 0.94
TSPAN4-205ENST00000397406 ERC1Q8IUD2 1116 aa20.92■□□□□ 0.94
TSPAN4-205ENST00000397406 KIF1BPQ96EK5 621 aa20.92■□□□□ 0.94
TSPAN4-205ENST00000397406 A0A1B0GUL6 1792 aa20.91■□□□□ 0.94
TSPAN4-205ENST00000397406 ZC3H4Q9UPT8 1303 aaKnown RBP20.91■□□□□ 0.94
TSPAN4-205ENST00000397406 GLTPD2A6NH11 291 aa20.91■□□□□ 0.94
TSPAN4-205ENST00000397406 CIAO1O76071 339 aa20.91■□□□□ 0.94
TSPAN4-205ENST00000397406 OS9Q13438 667 aaPredicted RBP20.91■□□□□ 0.94
TSPAN4-205ENST00000397406 ATG9AQ7Z3C6 839 aa20.91■□□□□ 0.94
TSPAN4-205ENST00000397406 FBXO3Q9UK99 471 aa20.91■□□□□ 0.94
TSPAN4-205ENST00000397406 EYA2O00167 538 aa20.9■□□□□ 0.94
TSPAN4-205ENST00000397406 SEC31BQ9NQW1 1179 aa20.9■□□□□ 0.94
TSPAN4-205ENST00000397406 RGS3P49796 1198 aa20.89■□□□□ 0.94
TSPAN4-205ENST00000397406 LRRC24Q50LG9 513 aa20.89■□□□□ 0.94
TSPAN4-205ENST00000397406 TAF7LQ5H9L4 462 aa20.89■□□□□ 0.94
TSPAN4-205ENST00000397406 PUS3Q9BZE2 481 aaKnown RBP20.89■□□□□ 0.94
TSPAN4-205ENST00000397406 TAOK3Q9H2K8 898 aa20.89■□□□□ 0.94
TSPAN4-205ENST00000397406 ZBTB47Q9UFB7 747 aaPredicted RBP20.89■□□□□ 0.94
TSPAN4-205ENST00000397406 TIAM2Q8IVF5 1701 aa20.88■□□□□ 0.93
TSPAN4-205ENST00000397406 IL1RAPL2Q9NP60 686 aa20.88■□□□□ 0.93
TSPAN4-205ENST00000397406 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.88■□□□□ 0.93
TSPAN4-205ENST00000397406 CACNA1SQ13698 1873 aa20.88■□□□□ 0.93
TSPAN4-205ENST00000397406 HOXA10P31260 410 aaPredicted RBP20.87■□□□□ 0.93
TSPAN4-205ENST00000397406 IL15P40933 162 aaPredicted RBP20.87■□□□□ 0.93
TSPAN4-205ENST00000397406 C16orf71Q8IYS4 520 aaPredicted RBP20.87■□□□□ 0.93
TSPAN4-205ENST00000397406 RBM46Q8TBY0 533 aaKnown RBP20.87■□□□□ 0.93
TSPAN4-205ENST00000397406 RIPOR2Q9Y4F9 1068 aa20.87■□□□□ 0.93
TSPAN4-205ENST00000397406 CCDC88AQ3V6T2 1871 aa20.86■□□□□ 0.93
TSPAN4-205ENST00000397406 SALL3Q9BXA9 1300 aa20.86■□□□□ 0.93
TSPAN4-205ENST00000397406 CCDC93Q567U6 631 aa20.86■□□□□ 0.93
TSPAN4-205ENST00000397406 LDHAL6AQ6ZMR3 332 aa20.86■□□□□ 0.93
TSPAN4-205ENST00000397406 CDC5LQ99459 802 aaKnown RBP20.86■□□□□ 0.93
TSPAN4-205ENST00000397406 TFCP2Q12800 502 aa20.85■□□□□ 0.93
TSPAN4-205ENST00000397406 OTUD7AQ8TE49 926 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-205ENST00000397406 ZNF277Q9NRM2 450 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-205ENST00000397406 ALDH1B1P30837 517 aa20.84■□□□□ 0.93
TSPAN4-205ENST00000397406 FKBP4Q02790 459 aaKnown RBP eCLIP20.84■□□□□ 0.932e-6■■■■□ 26.3
TSPAN4-205ENST00000397406 SOGA3Q5TF21 947 aa20.84■□□□□ 0.93
TSPAN4-205ENST00000397406 PLEKHM2Q8IWE5 1019 aa20.84■□□□□ 0.93
TSPAN4-205ENST00000397406 CLASRPQ8N2M8 674 aaKnown RBP20.84■□□□□ 0.93
TSPAN4-205ENST00000397406 BCL11AQ9H165 835 aa20.84■□□□□ 0.93
TSPAN4-205ENST00000397406 DDNO94850 711 aaPredicted RBP20.83■□□□□ 0.93
TSPAN4-205ENST00000397406 IGHMBP2P38935 993 aaKnown RBP20.83■□□□□ 0.93
TSPAN4-205ENST00000397406 DDX46Q7L014 1031 aaKnown RBP20.83■□□□□ 0.93
TSPAN4-205ENST00000397406 ANKRD18AQ8IVF6 992 aa20.83■□□□□ 0.93
TSPAN4-205ENST00000397406 CELF1Q92879 486 aaKnown RBP20.83■□□□□ 0.93
TSPAN4-205ENST00000397406 CNNM1Q9NRU3 951 aa20.83■□□□□ 0.93
TSPAN4-205ENST00000397406 COL4A5P29400 1685 aa20.83■□□□□ 0.92
TSPAN4-205ENST00000397406 ARAP2Q8WZ64 1704 aa20.83■□□□□ 0.92
TSPAN4-205ENST00000397406 EAF2Q96CJ1 260 aaPredicted RBP20.82■□□□□ 0.92
TSPAN4-205ENST00000397406 MPHOSPH8Q99549 860 aa20.82■□□□□ 0.92
TSPAN4-205ENST00000397406 GPR108Q9NPR9 543 aa20.82■□□□□ 0.92
TSPAN4-205ENST00000397406 ZNF609O15014 1411 aa20.81■□□□□ 0.92
TSPAN4-205ENST00000397406 DICER1Q9UPY3 1922 aaKnown RBP20.81■□□□□ 0.92
TSPAN4-205ENST00000397406 WDR90Q96KV7 1748 aa20.81■□□□□ 0.92
TSPAN4-205ENST00000397406 VEGFAP15692 232 aaPredicted RBP20.81■□□□□ 0.92
TSPAN4-205ENST00000397406 HTRA3P83110 453 aa20.81■□□□□ 0.92
TSPAN4-205ENST00000397406 TNNI3KQ59H18 835 aa20.81■□□□□ 0.92
TSPAN4-205ENST00000397406 DNAJC5GQ8N7S2 189 aa20.81■□□□□ 0.92
TSPAN4-205ENST00000397406 VGLL2Q8N8G2 317 aa20.81■□□□□ 0.92
TSPAN4-205ENST00000397406 CRAMP1Q96RY5 1269 aa20.81■□□□□ 0.92
TSPAN4-205ENST00000397406 CEP126Q9P2H0 1117 aa20.81■□□□□ 0.92
TSPAN4-205ENST00000397406 FPGT-TNNI3KV9GXZ4 949 aa20.81■□□□□ 0.92
TSPAN4-205ENST00000397406 RPS8P62241 208 aaKnown RBP20.8■□□□□ 0.92
TSPAN4-205ENST00000397406 RPGRQ92834 1020 aaKnown RBP20.8■□□□□ 0.92
TSPAN4-205ENST00000397406 OSBPL3Q9H4L5 887 aa20.8■□□□□ 0.92
TSPAN4-205ENST00000397406 BSDC1Q9NW68 430 aaPredicted RBP20.8■□□□□ 0.92
TSPAN4-205ENST00000397406 MROH5Q6ZUA9 1318 aa20.8■□□□□ 0.92
TSPAN4-205ENST00000397406 ZNF541Q9H0D2 1346 aa20.8■□□□□ 0.92
TSPAN4-205ENST00000397406 LRRC37AA6NMS7 1700 aa20.8■□□□□ 0.92
TSPAN4-205ENST00000397406 MX1P20591 662 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms