RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 MRFAP1L1Q96HT8 127 aa11.6□□□□□ -0.55
APTX-207ENST00000397172 TNMDQ9H2S6 317 aa11.6□□□□□ -0.55
APTX-207ENST00000397172 SPG7Q9UQ90 795 aa11.6□□□□□ -0.55
APTX-207ENST00000397172 FIBPO43427 364 aa11.59□□□□□ -0.55
APTX-207ENST00000397172 KIF1CO43896 1103 aaKnown RBP11.59□□□□□ -0.55
APTX-207ENST00000397172 SMARCA5O60264 1052 aaPredicted RBP11.59□□□□□ -0.55
APTX-207ENST00000397172 HMOX1P09601 288 aa11.59□□□□□ -0.55
APTX-207ENST00000397172 CALRP27797 417 aaKnown RBP11.59□□□□□ -0.55
APTX-207ENST00000397172 KRT85P78386 507 aa11.59□□□□□ -0.55
APTX-207ENST00000397172 PLEKHO1Q53GL0 409 aaPredicted RBP11.59□□□□□ -0.55
APTX-207ENST00000397172 JAKMIP3Q5VZ66 844 aa11.59□□□□□ -0.55
APTX-207ENST00000397172 SYT10Q6XYQ8 523 aa11.59□□□□□ -0.55
APTX-207ENST00000397172 CEP120Q8N960 986 aa11.59□□□□□ -0.55
APTX-207ENST00000397172 PPM1EQ8WY54 764 aa11.59□□□□□ -0.55
APTX-207ENST00000397172 ESYT1Q9BSJ8 1104 aa11.59□□□□□ -0.55
APTX-207ENST00000397172 C1orf115Q9H7X2 142 aa11.59□□□□□ -0.55
APTX-207ENST00000397172 L2HGDHQ9H9P8 463 aa11.59□□□□□ -0.55
APTX-207ENST00000397172 FHOD1Q9Y613 1164 aa11.59□□□□□ -0.55
APTX-207ENST00000397172 USP8P40818 1118 aa11.58□□□□□ -0.56
APTX-207ENST00000397172 MAGEA9P43362 315 aa11.58□□□□□ -0.56
APTX-207ENST00000397172 KCNJ6P48051 423 aa11.58□□□□□ -0.56
APTX-207ENST00000397172 ZRSR1Q15695 479 aaKnown RBP11.58□□□□□ -0.56
APTX-207ENST00000397172 SRLQ86TD4 932 aa11.58□□□□□ -0.56
APTX-207ENST00000397172 C10orf67Q8IYJ2 551 aa11.58□□□□□ -0.56
APTX-207ENST00000397172 ZSCAN31Q96LW9 406 aaPredicted RBP11.58□□□□□ -0.56
APTX-207ENST00000397172 TRERF1Q96PN7 1200 aa11.58□□□□□ -0.56
APTX-207ENST00000397172 JRKLQ9Y4A0 524 aa11.58□□□□□ -0.56
APTX-207ENST00000397172 BCL9O00512 1426 aa11.58□□□□□ -0.56
APTX-207ENST00000397172 PCDH11XQ9BZA7 1347 aa11.58□□□□□ -0.56
APTX-207ENST00000397172 PCDH11YQ9BZA8 1340 aa11.58□□□□□ -0.56
APTX-207ENST00000397172 SKILP12757 684 aa11.57□□□□□ -0.56
APTX-207ENST00000397172 PDCP20941 246 aa11.57□□□□□ -0.56
APTX-207ENST00000397172 PSEN1P49768 467 aa11.57□□□□□ -0.56
APTX-207ENST00000397172 SNW1Q13573 536 aaKnown RBP11.57□□□□□ -0.56
APTX-207ENST00000397172 CERS3Q8IU89 383 aa11.57□□□□□ -0.56
APTX-207ENST00000397172 SCAND2PQ9GZW5 306 aaPredicted RBP11.57□□□□□ -0.56
APTX-207ENST00000397172 IMPACTQ9P2X3 320 aa11.57□□□□□ -0.56
APTX-207ENST00000397172 MKRN1Q9UHC7 482 aaKnown RBP11.57□□□□□ -0.56
APTX-207ENST00000397172 MRVI1Q9Y6F6 885 aa11.57□□□□□ -0.56
APTX-207ENST00000397172 PKD1L3Q7Z443 1732 aa11.57□□□□□ -0.56
APTX-207ENST00000397172 PSDA5PKW4 1024 aaPredicted RBP11.57□□□□□ -0.56
APTX-207ENST00000397172 CCAR2Q8N163 923 aaKnown RBP11.57□□□□□ -0.56
APTX-207ENST00000397172 GTF3C6Q969F1 213 aa11.57□□□□□ -0.56
APTX-207ENST00000397172 CHAMP1Q96JM3 812 aa11.57□□□□□ -0.56
APTX-207ENST00000397172 CBX8Q9HC52 389 aa11.57□□□□□ -0.56
APTX-207ENST00000397172 SH2B1Q9NRF2 756 aaPredicted RBP11.57□□□□□ -0.56
APTX-207ENST00000397172 LIMCH1Q9UPQ0 1083 aa11.57□□□□□ -0.56
APTX-207ENST00000397172 RRP15Q9Y3B9 282 aaKnown RBP11.57□□□□□ -0.56
APTX-207ENST00000397172 BRWD3Q6RI45 1802 aa11.57□□□□□ -0.56
APTX-207ENST00000397172 CTAGE5O15320 804 aa11.56□□□□□ -0.56
APTX-207ENST00000397172 AP5Z1O43299 807 aa11.56□□□□□ -0.56
APTX-207ENST00000397172 VAMP4O75379 141 aa11.56□□□□□ -0.56
APTX-207ENST00000397172 PRKAR2BP31323 418 aa11.56□□□□□ -0.56
APTX-207ENST00000397172 CLCN6P51797 869 aa11.56□□□□□ -0.56
APTX-207ENST00000397172 LRMPQ12912 555 aa11.56□□□□□ -0.56
APTX-207ENST00000397172 CCDC158Q5M9N0 1113 aa11.56□□□□□ -0.56
APTX-207ENST00000397172 FAM196AQ6ZSG2 479 aa11.56□□□□□ -0.56
APTX-207ENST00000397172 MARCH10Q8NA82 808 aaPredicted RBP11.56□□□□□ -0.56
APTX-207ENST00000397172 CCDC150Q8NCX0 1101 aa11.56□□□□□ -0.56
APTX-207ENST00000397172 TACO1Q9BSH4 297 aaKnown RBP11.56□□□□□ -0.56
APTX-207ENST00000397172 ANO2Q9NQ90 1003 aa11.56□□□□□ -0.56
APTX-207ENST00000397172 CCDC172P0C7W6 258 aa11.55□□□□□ -0.56
APTX-207ENST00000397172 SYT1P21579 422 aa11.55□□□□□ -0.56
APTX-207ENST00000397172 ACTN2P35609 894 aa11.55□□□□□ -0.56
APTX-207ENST00000397172 ZNF165P49910 485 aa11.55□□□□□ -0.56
APTX-207ENST00000397172 TUBB4BP68371 445 aa11.55□□□□□ -0.56
APTX-207ENST00000397172 NAA30Q147X3 362 aaPredicted RBP11.55□□□□□ -0.56
APTX-207ENST00000397172 NKX1-1Q15270 411 aaPredicted RBP11.55□□□□□ -0.56
APTX-207ENST00000397172 FOXD4L6Q3SYB3 417 aaPredicted RBP11.55□□□□□ -0.56
APTX-207ENST00000397172 ANO6Q4KMQ2 910 aa11.55□□□□□ -0.56
APTX-207ENST00000397172 ARHGAP29Q52LW3 1261 aa11.55□□□□□ -0.56
APTX-207ENST00000397172 FOXD4L3Q6VB84 417 aaPredicted RBP11.55□□□□□ -0.56
APTX-207ENST00000397172 ILDR2Q71H61 639 aa11.55□□□□□ -0.56
APTX-207ENST00000397172 SUGP1Q8IWZ8 645 aaKnown RBP11.55□□□□□ -0.56
APTX-207ENST00000397172 IFNL2Q8IZJ0 200 aa11.55□□□□□ -0.56
APTX-207ENST00000397172 CACTINQ8WUQ7 758 aaKnown RBP11.55□□□□□ -0.56
APTX-207ENST00000397172 ZNF446Q9NWS9 450 aa11.55□□□□□ -0.56
APTX-207ENST00000397172 CEP83Q9Y592 693 aa11.55□□□□□ -0.56
APTX-207ENST00000397172 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.55□□□□□ -0.56
APTX-207ENST00000397172 EFCAB8A8MWE9 144 aa11.55□□□□□ -0.56
APTX-207ENST00000397172 CYP27B1O15528 508 aa11.55□□□□□ -0.56
APTX-207ENST00000397172 ZRANB2O95218 330 aaKnown RBP eCLIP11.55□□□□□ -0.56
APTX-207ENST00000397172 PLA2G4AP47712 749 aa11.55□□□□□ -0.56
APTX-207ENST00000397172 LUZP1Q86V48 1076 aa11.55□□□□□ -0.56
APTX-207ENST00000397172 DDX54Q8TDD1 881 aaKnown RBP11.55□□□□□ -0.56
APTX-207ENST00000397172 SHANK3Q9BYB0 1731 aa11.54□□□□□ -0.56
APTX-207ENST00000397172 AOX1Q06278 1338 aa11.54□□□□□ -0.56
APTX-207ENST00000397172 POLR3GO15318 223 aaPredicted RBP11.54□□□□□ -0.56
APTX-207ENST00000397172 EIF3JO75822 258 aaKnown RBP11.54□□□□□ -0.56
APTX-207ENST00000397172 PHKG2P15735 406 aa11.54□□□□□ -0.56
APTX-207ENST00000397172 ATP2B1P20020 1258 aa11.54□□□□□ -0.56
APTX-207ENST00000397172 CASTP20810 708 aaKnown RBP11.54□□□□□ -0.56
APTX-207ENST00000397172 PDE1AP54750 535 aa11.54□□□□□ -0.56
APTX-207ENST00000397172 AKAP4Q5JQC9 854 aa11.54□□□□□ -0.56
APTX-207ENST00000397172 RBM43Q6ZSC3 357 aaKnown RBP11.54□□□□□ -0.56
APTX-207ENST00000397172 NEK11Q8NG66 645 aa11.54□□□□□ -0.56
APTX-207ENST00000397172 NAT10Q9H0A0 1025 aaKnown RBP11.54□□□□□ -0.56
APTX-207ENST00000397172 CLSTN2Q9H4D0 955 aa11.54□□□□□ -0.56
APTX-207ENST00000397172 PHLPP2Q6ZVD8 1323 aa11.54□□□□□ -0.56
APTX-207ENST00000397172 LOC102724159A0A0B4J2E5 919 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms